Basic Information

Gene Symbol
rcor2
Assembly
GCA_961205875.1
Location
OY540814.1:23496457-23510375[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.6e-09 2.4e-06 27.7 0.0 3 46 130 173 128 173 0.97
2 2 6.3e-14 5.7e-11 42.5 0.0 3 46 389 432 387 432 0.97

Sequence Information

Coding Sequence
ATGGTTTTAGCAGAGAAAGGCAACGAGAATGCTCGAAATGGACGTAGAAGTAGAGGTCCCAGTCCCAACGGCCATGTCGCTGCAGAGTCAACTAGTGAAGATGAAAGTGtgCCTGTTGACAAAATCCGTGTTGGTCGCGATTATCAAGCAATATGTCCAGCACTGCAGCCTTTGGAAGCGCGGCGACCCGATCAACTCGCTGACCGCGCCTTGCTTGTGTGGTCTCCGACCATAGATATTCCGGAGAAAAAATTGGATGACTATATCAAACTAGCAAAAGAAAAATATGGATACAACGGAGAGCAAGCATTGGGGATGTTGTTTTGGCATAAACACGATTTGGAACGTGCCATTTTAGATCTGGCCAACTTTACCCCGTTCCCGGACGAGTGGTCCGTAGAAGATAAAGTACTATTCGAACAGGCGTTTCAATTCCACGGCAAGAGCTTCCACAGAATTCGTCAGATGTTGCCGGATAAGAGCATTGCCAGTTTGGTAAAGTATTACTATTCGTGGAAGAAGACCCGTACGCGGACTAGTTTGATGGATAAACAGGCCCGCAAGCTGACGACGGCACGGGACGAGGCTGCATCTGAAGGGGGTTCGGAAGGCGCAGGATCAAACGAGGAGTCTGACGCTGAGGAGAAGCAATGGACGGTGCACCGTGGTATAAGACGCAAGAGCGGGTCACCGTCCCAAAGCGGTGGACAGTCTGCGGACAACGAGCATGCCGCACAGGGGGAGGGGGGAGGTGGCGCGTGTGGCAACTGTGGGGTGCTGTGTTCTCTGACCCACGTCACATCCCGGGGACAGCAACTATGCCACTCGTGTTTCCAGCACTGGAGACGTACGGGCGTGTCGAGGCCTATATCTGGACCTGGTTTGGGCGGTGGCAGAAGGGCGGGAAGTTTGGCAGCCGCAAGACAGAGCAGGAAGCCACCAAGAGGCATGCACATCAACCACGACGATCTGGTCGCCATGGCGGCGGCGACTCACGGTGACCTAGTGTTGCGTGCGATGGACCGCGAGCTAGTCTCGCTAAAACGTCAAgttcagttaaacaaacaaacaatcaGCGCACTGAAACTAAAATCAGGAGACACGGTTGACGAGCTTCGACCAGAACAAGTTGAACAACAGACAAGCGGCGGACGTATCAACTCTCGCTGGTCACAAGAAGAACTGCAGCTAGCTGTTGAAGGTGTCAGAAAATACGGTAAGGATTTCAAAGCAATAGCAGATATCATCGGAACAAAAACAGAGACGCATTTACGTAGTTTCTTTGTGAATTATCGCCGCCGATACAACTTGGACGATGTAATAAAAGAATACGAAGCAGAACATGGTATCGTGAGTGCCCCGAATGAAAATAGCGAAGAGAAAATGGATGTGGATACAGAAAATAACGGGGAAGCGATGGAAGTAGATAATGTAGTAACCGATAATAATACAAAGAGTGAAAATGTAACGGCGCAAGCAGCCAAGTGA
Protein Sequence
MVLAEKGNENARNGRRSRGPSPNGHVAAESTSEDESVPVDKIRVGRDYQAICPALQPLEARRPDQLADRALLVWSPTIDIPEKKLDDYIKLAKEKYGYNGEQALGMLFWHKHDLERAILDLANFTPFPDEWSVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRTRTSLMDKQARKLTTARDEAASEGGSEGAGSNEESDAEEKQWTVHRGIRRKSGSPSQSGGQSADNEHAAQGEGGGGACGNCGVLCSLTHVTSRGQQLCHSCFQHWRRTGVSRPISGPGLGGGRRAGSLAAARQSRKPPRGMHINHDDLVAMAAATHGDLVLRAMDRELVSLKRQVQLNKQTISALKLKSGDTVDELRPEQVEQQTSGGRINSRWSQEELQLAVEGVRKYGKDFKAIADIIGTKTETHLRSFFVNYRRRYNLDDVIKEYEAEHGIVSAPNENSEEKMDVDTENNGEAMEVDNVVTDNNTKSENVTAQAAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01343901;
90% Identity
iTF_01343901;
80% Identity
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