Sful012439.1
Basic Information
- Insect
- Sialis fuliginosa
- Gene Symbol
- ttk
- Assembly
- GCA_961205875.1
- Location
- OY540817.1:17636017-17640294[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4e-16 1.5e-13 50.3 0.0 2 45 381 425 380 425 0.95
Sequence Information
- Coding Sequence
- atggcAGTACAACAATTCTGCTTGCGATGGAATAATCATCaaccaaattttatttctgtatttTCGAACTTATTGAATAATGAATCGTTAGTAGATGTTACCCTAGCCGCAGAAGGACGACACTTACAAGCACACAAAGTCATTTTATCAGCTTGCAGTTCATATTTTCAGTCTCTCTTCATGGCAAATCCATGTCAACATCCGATAGTCATTTTAAAAgatgttaattttattgatttaaaaacaatGGTTGATTTTATGTATTATGGAGAAGTTAACGTTTCTCAAGAACAGTTGCCACATATTTTAAAGACTGcggaaatgttgaaaattaaaggTTTGGCGGAAATGCCCGATACAACACTACTGTCAAAATCACATAGTACATCTTCAGATAAAACGGACCTGCTGAAACTTGGAGAATCTAATTACAGTACAGAAATACAGAGGCAATCGATGTCACCATCACCTTGTTCACTTTCTCCATCCGCACGGAGaaaaagacTTCGTAAAACATCTTTAGGCTCTGGTTCTGGTTCAACAGAACAAACATCTGAAGAACATCCCAATGAAATATCAGTATCATCTCCAGGAGACAGCGGAGTCAGTACGGTGACAACAAAAATGGAACTGAACACTAGCTTTACATTAGACGGTAACACATCTCGACACACTACGATAAAACAACACAGTAGCACAGACTCGGATACAATTAGGAGCACTCCAAAGCAACAGTCAATGGAACACGAACACGATCAACATAATATATCACATATATCATTGcaAATATCGCAACCAGATATGACGACACCACAGCATTCTGACAATCAGTTAGTAGGAGTTCCGGGACCCTCTGTACCTGCATCTACATCACACCCAGCTAGTCAAGGTCCGTGGACATTAGTGGAGCACCCCTCTTATCCCTGCTTCACTTTATCATCATGTCAGACGGACATGCAAGGGCTACAGTCGCAGTGCATGCAATACATGCCAGGAATGGCTCCGTCATGCGCGATGGAAGAGATAAAGGTAGCCCCGGCCAGCCCGTGTCCCAGCGTGTGCCCGTCACCTTGCTCCTCCCCGAAAGTGCAACAACAACAACCTACGGTAAAGAGAAAGCGATCTGTTAATCCTCAAGCCGACGAGAACTTTACAAAAGCGCTGGACGCAGTCAGATTCGGAGGGATCGGGTTTTGTAAAGCGGCAAGGATGTACGGAGTCAATAACAGGACATTGTGGTTGGAATATAAAAAGCGGGGGTATCCGATAAGTAGGACGAGTATCAAAGCAAGAGTCAAGCAACAAACACAGACTGAAATGGATTCGCCAGTTGAACAACAGCAGCAGCCGATATGTGCAACTGCACCTCCACTTGTAACTGATATTATTGGGGGGTTCATGAACCAAAGACACGTAGAGTTTGTACCAGATGTACAGAGATCACCCGTCCTCGGTATGAATCAGTTGAACTTGCACGGAGTTAATTTCGGCTCTGTTGGTTGA
- Protein Sequence
- MAVQQFCLRWNNHQPNFISVFSNLLNNESLVDVTLAAEGRHLQAHKVILSACSSYFQSLFMANPCQHPIVILKDVNFIDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPDTTLLSKSHSTSSDKTDLLKLGESNYSTEIQRQSMSPSPCSLSPSARRKRLRKTSLGSGSGSTEQTSEEHPNEISVSSPGDSGVSTVTTKMELNTSFTLDGNTSRHTTIKQHSSTDSDTIRSTPKQQSMEHEHDQHNISHISLQISQPDMTTPQHSDNQLVGVPGPSVPASTSHPASQGPWTLVEHPSYPCFTLSSCQTDMQGLQSQCMQYMPGMAPSCAMEEIKVAPASPCPSVCPSPCSSPKVQQQQPTVKRKRSVNPQADENFTKALDAVRFGGIGFCKAARMYGVNNRTLWLEYKKRGYPISRTSIKARVKQQTQTEMDSPVEQQQQPICATAPPLVTDIIGGFMNQRHVEFVPDVQRSPVLGMNQLNLHGVNFGSVG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01343190; iTF_01343862; iTF_01344122;
- 90% Identity
- iTF_01343190; iTF_01343862; iTF_01344122;
- 80% Identity
- iTF_01343190;