Basic Information

Gene Symbol
ARID5B
Assembly
GCA_961205875.1
Location
OY540820.1:17265209-17270827[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-26 3e-23 82.1 0.0 2 89 267 352 266 352 0.95

Sequence Information

Coding Sequence
ATGTACGGTAATTTATTTTGGTTGGATGAAGTACTTGCCATATCAGAAAAAGTAGTTTTACGAGCTGAAGACTTATTAACGTGGATAACATTAGATGCTGACTGGAACTGGGGAATACACTCAGTGTGGAGCGAAAGTGTACAACCGCCTCCACCTTTGTCGCCAAGCATAAAGACAGAGGAACAGGACCCGTTGGGAGACTGTAAAGAAGACCCGTTAGCATTGAACGATCCGCTCGGTGATTGTAAAGATCCGTTGTCGGATTTTTCAAACAAGCCTTACATTTGTACAAGACGTGCAGCGCCTGCACTCACAGATAGCCTTCTAGATTTTTCTGATGTGGAAAAGGAAAGAAACGTATTGGATGATTCATGGACCAAAGGAAACGGTGTTATGGTATTAAGTTATCCTCATTACTGTAGATACAGAGCTCTTATGAAACGGCTAGAAAGCGTTGAAGATAAATGGTTAAAAAGTTCACTCGTAGCTGCATTAGGTGGTTTCAGTTCACCTTGTCAAAACACGAGAGTTTTGTTTTGCAAAGACACATTCGATTATCCGGATTTAGAGGGGCATGAACTTTTATGTAATCATTTAGCACCCAAACTTAAAGGTCGACCTAGAGGTAAACGGAAAAAACGTAGCATCTCACCTGGTGGATCGGAATCTAATGAATCAGAGTCATCTGTGTCAATTGTGTCACTTAGGACAAGATTAACGACGAGTGCAAAGAATGGTTTAAGATGCAACACAACAACATTACCACGGAGAAGTACGCGGTCTTCACAATCAGTGGAGGAACGTGACTTCTTAACAAAGCTAAATACGTTTATGAAAACACATAGAACACCTATAGGACGTGTTCCTTCATTGGGCTTTAAAGAAATTGACTTATACCAATTCTATAGTAAGGTACAGAAATTAGGTGGATACGAAAAAGTTACGTCAAATCGTACGTGGAAACAAGTATTTGACGAGCTAGGCGGTAATCAAGGAAGCACAAGTGCAGCTACAATAACAAGACGCCATTATGAAAGACTGCTCTTACCGTACGAACGCAGTGTCCGAGGTGAAGACTTCAAATCTACAACTGCAGCTGATCGTAGAAGACTGAAGACATCTAAAACGAGTAACAGTTCGATTGCGAGTGCTAGCGCGAGTGATAGCGAAGGATCCAGTGGAACCTCGACTCCTGTTTCATCACATGCACAAGCTTATTCGCCGTCACAGaTATTTATTGTGCCTGGAAAAATAAGATCAGAAGGAAAAACATCATCATTAAGAAGTGTAAGAGTAAAACCAGAAAGATTACGAGAAGCGACAAAACAAGAAAAATGTAGCTCTACGATATCGAGATTGGATTCTCAAAATGATATTGTGACTCCAGTAACTCCATCTGATACTTCATCAAGTGCAATGCTTGTCAACATTCCTTCACCAACCATGAGTCCTGATAGTCCAGGCAACAAACCGAGCAATGATAAACCAGACACTGCCACAATCAAAGGAAAAGAAAATATTCCTGTACCAAACACTCCGTGTAATGGTACAGATATTTTAAACTCGACAAACAGTATCGAAGAACCAAAAGAACCATCaccatcaaaatcaaattcaccTGAATGTGTTGAAAATGAAACCAGCTTCAGAAAACCAAACCTTCTTCCATCAATATTCCCTGAAATGAAAAAACGTAAACTGGATATTCTAAAGGAAGGTGGTTTAGAAGTAACTGCCGTTACGACGGACGTAGAAAACCGGCCATCTGTCATTCACCAATTCAATATTCCTGAAACGTTGCCACGGAAAACATTGGATATTTCTTCAATGAGACACCTACCGTCGACTAAAATCAACCGACTACCTCAGTTAAATGTGCCCAAGCCTTGTCATTTGCCTTATTCCAATAATCAAACACCCCCTAAAGTAATCCAGTCCCGATCAATCTACAGTCATTCGCAGAACACTGTGTACGGTAATCCTAAAGACATAGATCCTCTTATGCCACCCCCAGCAGTGCCACAGGTCCCTCGGTATATCCCGCCACGGTCACCGGCAGGCGGTGAAGTGCTAGACCTAACCGTCCGCAGCCCGCAGAAACCTGTCGTAGAGATAATGAGAGTGCCAAGCACGGCAGCTCGAATCCCTAAAGAACATCCTGTCAGTGCTATACCTGTGCCCATGTTTGATGGAAGAATCGTCGGTTCAAATTTAGAAATAACCTTAGTCGGACCACCAAAAATACCCCAGAAAACACCTTCTTTTGTTCAGAAAGTTCCGGTACTTTCAAGACAACCTCAAAAGAGATCTGCTTCTGGGAAATTCATGTCAAATAGAATGGAAAATGGGAAACAACCTTCAGTTAGTGTTCAGCCTGTTATGAAAAACGGTTCAATTTCCTCCAATAGTGCCAATCTTATAATTCCAACACCTCCAAGTCGAAACAGTTCTTCGAAATCTGATAAGTCTAAACAACAGTCAGTGACAAATCACGATCACATTAATCCAGCTGTGTTTCCAAACTATTTGTCACAGTTGTCTGCTATCGGAGCTAAGATACCGTACCTCGCACTTGATCCGCTGTATTACTCGGCGTTAGCTCAAAGACTGTATGCTAATCCAATGCAGTTAGCTGCTGCATTTCAGCCCAGCCCTACAGCTGAACAGTTACAGTTTTACAAAGAGTTTATGAACTTTAATAACCATTTTTTACTACCTGAAGGTTCAGCATCGATCACTTCTGTTGgccataataatacaaataattcaaagaactaa
Protein Sequence
MYGNLFWLDEVLAISEKVVLRAEDLLTWITLDADWNWGIHSVWSESVQPPPPLSPSIKTEEQDPLGDCKEDPLALNDPLGDCKDPLSDFSNKPYICTRRAAPALTDSLLDFSDVEKERNVLDDSWTKGNGVMVLSYPHYCRYRALMKRLESVEDKWLKSSLVAALGGFSSPCQNTRVLFCKDTFDYPDLEGHELLCNHLAPKLKGRPRGKRKKRSISPGGSESNESESSVSIVSLRTRLTTSAKNGLRCNTTTLPRRSTRSSQSVEERDFLTKLNTFMKTHRTPIGRVPSLGFKEIDLYQFYSKVQKLGGYEKVTSNRTWKQVFDELGGNQGSTSAATITRRHYERLLLPYERSVRGEDFKSTTAADRRRLKTSKTSNSSIASASASDSEGSSGTSTPVSSHAQAYSPSQIFIVPGKIRSEGKTSSLRSVRVKPERLREATKQEKCSSTISRLDSQNDIVTPVTPSDTSSSAMLVNIPSPTMSPDSPGNKPSNDKPDTATIKGKENIPVPNTPCNGTDILNSTNSIEEPKEPSPSKSNSPECVENETSFRKPNLLPSIFPEMKKRKLDILKEGGLEVTAVTTDVENRPSVIHQFNIPETLPRKTLDISSMRHLPSTKINRLPQLNVPKPCHLPYSNNQTPPKVIQSRSIYSHSQNTVYGNPKDIDPLMPPPAVPQVPRYIPPRSPAGGEVLDLTVRSPQKPVVEIMRVPSTAARIPKEHPVSAIPVPMFDGRIVGSNLEITLVGPPKIPQKTPSFVQKVPVLSRQPQKRSASGKFMSNRMENGKQPSVSVQPVMKNGSISSNSANLIIPTPPSRNSSSKSDKSKQQSVTNHDHINPAVFPNYLSQLSAIGAKIPYLALDPLYYSALAQRLYANPMQLAAAFQPSPTAEQLQFYKEFMNFNNHFLLPEGSASITSVGHNNTNNSKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01343725;
90% Identity
iTF_01343725;
80% Identity
-