Basic Information

Gene Symbol
Arid4b_1
Assembly
GCA_961205875.1
Location
OY540815.1:16337950-16346201[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.3e-28 5.6e-25 87.7 0.0 1 89 326 412 326 412 0.95

Sequence Information

Coding Sequence
ATGTCTCAAGGTGATGACCCACCATATCTTCCAGTTGGAACTGAAGTAAGTGCCAAATACAAAGGTGCATTTTGTGAGGCCAAAATAAGCAAAGTAGTTCGGGTTGTAAAACTCCGTGTAACTTACCGTGGAACTGGTTTGGGAGCAGCTACATTATCTGATGAGCAAGTACGATGCCCACCTGGCCAAAGACAGAGAGTGGGAGCAATTGTACAAGCTAAACACGGTGACAAAAAAGAATACGTCGATgcaacaataacaaaaatacaggATTGCAGTCAATACACTGTTGTTTTTGATGATGGTGATATAACAACATTAAGGCGGTCTGCTTTATGCTTGAAAAGTGGACGGCATTTCAATGAAAGTGAAACATTGGATCAGCTACCTCTTACTCACCCAGAACACTTTAGTAATCCTGTTGTTGGTGGAAGACGAGGACGGCGAAGCCGTCAAATGAaAGAAGACAGTAGCGATGATGAAGACTCAGCTTCTACTTCAGGTTTTGGTGAAGTCGGGTCTGGTTCTGGAACAGGTCGAGGTTCATCTCAGGAAGATGATATTGTACCTTGCGGTGATGTGGGGAAGGTCGTACGAGTCGAATTGTCTGATGGAGGTAAACGAGGTCGTGGTTCTGGTACTTCAAACACTGCATGGTTCCCTGGTCTGATCGTTGCTCCAAATGCACAGAGCTCTGTAAGAATTAATACAAAGGATGAATATTTAGTGCGCTCGTTTAAAGATAGTAGATATTATACTGTACCTAGAAAAGATCTCTCTGAATTTAAACGAGAAACAAGTCGAGGTACAAGTCCACCTTTAACAGAAGCAATAGACAGAGCACTTAGTTATCTCGATAAGTCTGAATTACCTCAGCATTGGGATAGAGATGAGTTACTTCTTGGAGCACACGCTAATGAAAAATCTGATTCTGATGATAACATAACAGAAagtTCTGATGATGAAACGACAGAGGAAAAAGATCATTTTGTCGCACAGCTGTACAAGTTTATGGAAGATCGTGGTACACCTATAAACAAAGGTCCCGTTATACAGAATCGAGACGTCGACCTTTGCCGGTTGTTCAGAGTCGTTTGTAAATTAGGCGGATATAACCGAGTTACAAATAATAACAAGTGGCGCAAAGTCACGGCAAGATTGGGTTTCAATGCACCAAGTGCAAGTACTAGAAATCTTGTCAAACAGGCATACAAAAAGTTCTTGTTTTCTTATGAAGAGTTAGATCGCAAGTTAGGTTGCACGATGGTCACTCAACCTCAAAGATCGGCCGCGAGAGGACGTAGTTTAATAAGAGATAGAGATCGTATGACTCCAGTTAATCCACAGGTTGGTACTGCAAGTCCAAAACCAGAAGTAAAACCACCCGAAGATAGTCCTGATGTTGTAGAAAAGAAAGAAGAAGAAGAGAAGAAAAAGCCCAAACCGAaagaagatattaaaataaaaaaagatgatATTACAACTGACGGATCGGTTAGCGACGGAAACACTTCAGATACTAAACGTATTGCAGCAGAAACGATCACAGCTTCACCCGTGAAAGGGAAGGAATTCAAGAAAATGTTAGAAGCTAAAGTTACTGTCGTTAAAGAAACACAACAACGTAAAATCAAACCTGCGGTAGGTGAAAAAGTAAAAGCGTTAGTTGAAAAGTTTGAAAGTCAAATTAAACCGGATGATGAAGAAAAGGTTCAATCCACTCGATCTAAATCAGTTAGTGCACCGCGTCGTGAAAGACCATCTTCACCTATTATAGAACGTAAAAGTAGCGAGACCCGCGCCCCTCTGCGGGAAGGTGCCGGTTCCAGACTTGGAAAACCGTTACGGCCTGTTAGACAAGCAGGAAATGGAGATGAGGAGAAGAAACGTGGCCGCAAAAAGAAAGACGTCTCCGATGATAAATCTCAGTCAAGTGAAAGTTCATCTGCCGAAGTTCCTACACCGTTGGTGACAAATATAAACCTAGGAGATAAGCTGCGGGTGTTTTACGGACCGAATCCTGATTCTAAAGTTACGTACGAAGCAAAAGTAATCGATATTGACAGTGGCGACGAAGGGACTCGATATAAAGTGCATTATACCGGATGGAATACACGGTATGATGAGTGGATACAGTCCAGCAGGGTAGCAGAAAACCTGAGTCAAATGGCGAAGGCTAAACGTAGAGGGGCAGATAAAGGTGACAAAGCTGATAAAGAGAAAAGTGAAAAAGGGGAAAAGGTTATGGCTGAGAAGAATACTGATAAAGGAGAGAAAGCTCAGAATAAGAAATTAGGGCCAGGATCTGCAGCAAAACgaggaagagGAATGTCTGTATCTGGAAGAGTTAGTCAGGATCCTCCACGCTCCACTACACCTTCATCGTCATCTTCAAATCGATCAAAATCTCGTACGGCTTCGCGTGCTGCTCGCCTCATTGTTTCCGATTCAGACAGTGATGTGTCTGAAATAATAGATTTGGCTCCTGGAAATTCGACTTCAGTAACTAGCAATTCGGTTAATTTAGAAAACACAAGTTCTTCTGGGTCTGCTAACACTGGCACCGGCTCACCAAGTTCAACAAATAGACCTCAAAGGCAACGGCAGCCAAGGCCGACTAAAAAACGTGAATCTACGCCAGAAAGACCTGCTTCAACCGAATCGAAAAGACCAAGGCGGACTCCGAAGCGAAACGCCGATATTATCAGGGCTAGCGTACTGGAAAGTGACGAAGATAGTGACGAGATGTTGGAAAAAGCGAAGAAAGCGTCTAAAGTCACTGCGGCTAAAGAGAACAGTAGCAAGATTGAAGTGATAAAAGAGAGTGCAAGTAAAGATAAAGAAAAGGAGAGTGAAAGAAGAGATTACGATTTGAATCAAATAAGATCTGAATTAAAAGGTATTCATAAAATTACACCTTCAATTGCTGCTTTGTCCAGTGATGAAAAACTTCCACCAGTAAACCAACCTTCTGATACAAAATCTACAACATCACCTGAATCAAAGGAAGTATCGCAACCTGAAGAAAAAGCAGAAAAACTGTGTACTACTGATGATATATATGAATTTAAAGAACCAGAACCATTTGAGTTTGAATCTCGTCCTAAAATCAGTGATGAAAAATCAGCCAAAAAACGATTAGTTCCTCGTGTTTTTGATGATTCCCCAATAAAGAAGAAGGCAACAAAAACAGAAAAGACATCTCCTTCGAGGTTCCGTAAAACCACTAACAAAAAATTAGAAGTTGAGTTGGGTTtagaaatttcatttgattgtcTTGAAGAATCTTCATTAGGTGTTACTCCAGGAACTGCATCTATTTTGCCTCTAGCAGATAAAGATAAAACTAAATCAAAGAAAGAATTTGACACATATGATCCAATAAGTCTTCTCCAAGATACCCTTGAACCCGATGATGTTCCAGAAATCAATTTAAATGATGATGAGAAACCATTTTTTTTCAGTACTAGTGATAAATTATCAGATTTTGGTACAAATtctattttttgtcattttgatggatcgaaaaaaaatgaaaaagacGAAGACCAACTAATTCAGGAGGCAATAGAAAGAGTCATAGCTGAAGGTGACGGTGATGGTGATATTAGTGATGATTTAATCAGTATGAGTAAAGACAAGAAGGAGACAGTTAAAGAACCTCCTAAACCTGAAACTCCTGAACCACTCGAAACCAAAACTGAAACAGATGTTCCGAAAGAACCGACCATTATTAAAGCCGAGAAACCTGAATTACCTGAGCCTCTTACAATTAAAACAGAACTGAATGAAATAAAGAGTCCAATAACCATAAAGAAAGAAGCTGAAAAACTTGCAAAACAAATATCACCAGCACTTCAAGAAACTGACAGTTCTCTTTTAGAAGCTGCGATCAGTCAGCAACGAATTGAATTGAAAACAGAGCCCCTCGATATCACCATTAGAACAGGTACAAAGATTGCTGATTCTATTTTACAGAAATTCAATATGATTAAAAAGAAAGAAGAATTACCTCCAACTTCAACAAAGAAAGTCGAGGTTAAAGCAGTGGATAAAGCTAAACCAAAAGAAGAACCCACAGTTATCGCTGCCGAAGGTTTTAAGAAACGTAGTGGTTGGAAAAAAGTCGTCAGTCGTGAAATAATCGAGTCTGAGTCAGATTCTAGTGATTCAGAAGAAAGATTGATCATAGCAAGATCGGATGAAGATTCTCAAGTGAGTCAAGCTGATTCTGCAGGCTCTGCAGTGAAAGAACCTGAAGTCAAACCACCAGAAAAGGTTGTTGTCGAGGAACCAAAGAAATCACCTAGTTCTGAAAGCGAACCTGCGGTGGAAGTAAAAACTGAACCTAGCTTAAAGGTTGAAGAGGAACCGAACAGTAATGTTTCAATATTACTTTGTGAAGAAACAATACCAGGCAGTCCAGCACCAGTCACTGAATCTGTACAAGTAAATGAATCTCGTTCTAAATCAAAATCATCTAAAAGTCTAGTCTTAGAAATGCCATTTGCAAGCGCTGCGGGATCTAGCAATAGTAAAGTCATAACTGCGGTCGTAGAACCTGTGAAAAGAGCACCGGAACCGGTTGTTAAACCTGTCCGTGCTGTTCCAGAGACGACTCCCACAATAGATAATACATCGCCCACGACACCTGATAGTACAATATCTAATTTGTCCCCCAGAGGAGAACATGGGGGATCATCGCCAGGCACAGCAGACGAAAGTAATAAGTCGCAAAGAGATTCGGAAACAAGTGAGGCCGAGCCGTATACTGCCCGTTCAAATAAACCTCATCATTACAGTGAAGAAGataccCTATTAAATGCAGACACAATTCCTCTTGATATCAGAGCAAAGAAACAGCAGCAGTTACGTCTGTCTGCAAATTCAGGTCCAGTAAATGATGATGGAACCGTTCCAAGTGTTCAACCGTATGGAAGAAAAAGACGTCGTTCTTTCAGAGGACCTCCTGATGAACCTACAGTATCTAATAACGTTCCCATCGTTACTCAAGCACCAGCGAAACGTGGTCGGAAACCAAAGCACATGAGACCTATGGCCGTCGTCCCGACGCCGGGCAGTGATAGTGACGACACTTCGGAACATTCCAGTGTTGCTACGATTCCGATAGGTCCTTTGTCTGGGTCATCACAAGAAACCAAAATGAGCAGTGCGAATATACCGAGTCTCGGATTGAGTTTGTCGGGCATGCATAGAATCTCGAAGTTTAATTTTGTGATAGAATTGGATCCAGATTTAGATGGAAATCAACGTGTCGCAATCTTACAACAAAAGTTATCAGAGCTGAGAAAAGCATACAACGATGTTAAAAACGAACTAGCATGCATCGACAGAAGGAGAAAAAAGATCAGAAGGCGCGAGAGAGAAGCATTGAAGGCTGCGAAACAAGAAATGGCTTGCTCATGA
Protein Sequence
MSQGDDPPYLPVGTEVSAKYKGAFCEAKISKVVRVVKLRVTYRGTGLGAATLSDEQVRCPPGQRQRVGAIVQAKHGDKKEYVDATITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFSNPVVGGRRGRRSRQMKEDSSDDEDSASTSGFGEVGSGSGTGRGSSQEDDIVPCGDVGKVVRVELSDGGKRGRGSGTSNTAWFPGLIVAPNAQSSVRINTKDEYLVRSFKDSRYYTVPRKDLSEFKRETSRGTSPPLTEAIDRALSYLDKSELPQHWDRDELLLGAHANEKSDSDDNITESSDDETTEEKDHFVAQLYKFMEDRGTPINKGPVIQNRDVDLCRLFRVVCKLGGYNRVTNNNKWRKVTARLGFNAPSASTRNLVKQAYKKFLFSYEELDRKLGCTMVTQPQRSAARGRSLIRDRDRMTPVNPQVGTASPKPEVKPPEDSPDVVEKKEEEEKKKPKPKEDIKIKKDDITTDGSVSDGNTSDTKRIAAETITASPVKGKEFKKMLEAKVTVVKETQQRKIKPAVGEKVKALVEKFESQIKPDDEEKVQSTRSKSVSAPRRERPSSPIIERKSSETRAPLREGAGSRLGKPLRPVRQAGNGDEEKKRGRKKKDVSDDKSQSSESSSAEVPTPLVTNINLGDKLRVFYGPNPDSKVTYEAKVIDIDSGDEGTRYKVHYTGWNTRYDEWIQSSRVAENLSQMAKAKRRGADKGDKADKEKSEKGEKVMAEKNTDKGEKAQNKKLGPGSAAKRGRGMSVSGRVSQDPPRSTTPSSSSSNRSKSRTASRAARLIVSDSDSDVSEIIDLAPGNSTSVTSNSVNLENTSSSGSANTGTGSPSSTNRPQRQRQPRPTKKRESTPERPASTESKRPRRTPKRNADIIRASVLESDEDSDEMLEKAKKASKVTAAKENSSKIEVIKESASKDKEKESERRDYDLNQIRSELKGIHKITPSIAALSSDEKLPPVNQPSDTKSTTSPESKEVSQPEEKAEKLCTTDDIYEFKEPEPFEFESRPKISDEKSAKKRLVPRVFDDSPIKKKATKTEKTSPSRFRKTTNKKLEVELGLEISFDCLEESSLGVTPGTASILPLADKDKTKSKKEFDTYDPISLLQDTLEPDDVPEINLNDDEKPFFFSTSDKLSDFGTNSIFCHFDGSKKNEKDEDQLIQEAIERVIAEGDGDGDISDDLISMSKDKKETVKEPPKPETPEPLETKTETDVPKEPTIIKAEKPELPEPLTIKTELNEIKSPITIKKEAEKLAKQISPALQETDSSLLEAAISQQRIELKTEPLDITIRTGTKIADSILQKFNMIKKKEELPPTSTKKVEVKAVDKAKPKEEPTVIAAEGFKKRSGWKKVVSREIIESESDSSDSEERLIIARSDEDSQVSQADSAGSAVKEPEVKPPEKVVVEEPKKSPSSESEPAVEVKTEPSLKVEEEPNSNVSILLCEETIPGSPAPVTESVQVNESRSKSKSSKSLVLEMPFASAAGSSNSKVITAVVEPVKRAPEPVVKPVRAVPETTPTIDNTSPTTPDSTISNLSPRGEHGGSSPGTADESNKSQRDSETSEAEPYTARSNKPHHYSEEDTLLNADTIPLDIRAKKQQQLRLSANSGPVNDDGTVPSVQPYGRKRRRSFRGPPDEPTVSNNVPIVTQAPAKRGRKPKHMRPMAVVPTPGSDSDDTSEHSSVATIPIGPLSGSSQETKMSSANIPSLGLSLSGMHRISKFNFVIELDPDLDGNQRVAILQQKLSELRKAYNDVKNELACIDRRRKKIRRREREALKAAKQEMACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01343724;
90% Identity
iTF_01343724;
80% Identity
-