Basic Information

Insect: Shargacucullia verbasci
Gene Symbol: stc
Assembly: GCA_947562105.1
Location: OX387289.1:3271435-3281503[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 2.2e+04 -4.5 1.6 15 19 502 506 501 506 0.81

2 13 0.045 4.9e+02 1.1 1.2 2 10 534 542 534 542 0.93

3 13 4.3e-05 0.47 10.8 18.1 4 19 550 565 548 565 0.93

4 13 1.2e-07 0.0014 18.9 9.8 1 18 601 618 601 619 0.98

5 13 0.001 11 6.4 16.9 1 19 660 678 660 678 0.98

6 13 3.1e-05 0.34 11.3 13.3 1 19 719 741 719 741 0.87

7 13 0.0038 42 4.6 7.4 1 11 781 791 781 792 0.95

8 13 0.049 5.4e+02 1.0 0.3 4 10 796 802 795 803 0.93

9 13 7e-06 0.076 13.3 15.0 3 19 810 826 808 826 0.92

10 13 0.00045 4.9 7.6 9.6 10 18 873 881 870 882 0.92

11 13 4.9e-08 0.00053 20.2 14.0 1 17 918 936 918 942 0.85

12 13 8.8e-05 0.97 9.8 3.0 1 14 948 960 948 963 0.95

13 13 2 2.2e+04 -5.0 5.1 12 18 1224 1231 1224 1232 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	2.2e+04	-4.5	1.6	15	19	502	506	501	506	0.81
2	13	0.045	4.9e+02	1.1	1.2	2	10	534	542	534	542	0.93
3	13	4.3e-05	0.47	10.8	18.1	4	19	550	565	548	565	0.93
4	13	1.2e-07	0.0014	18.9	9.8	1	18	601	618	601	619	0.98
5	13	0.001	11	6.4	16.9	1	19	660	678	660	678	0.98
6	13	3.1e-05	0.34	11.3	13.3	1	19	719	741	719	741	0.87
7	13	0.0038	42	4.6	7.4	1	11	781	791	781	792	0.95
8	13	0.049	5.4e+02	1.0	0.3	4	10	796	802	795	803	0.93
9	13	7e-06	0.076	13.3	15.0	3	19	810	826	808	826	0.92
10	13	0.00045	4.9	7.6	9.6	10	18	873	881	870	882	0.92
11	13	4.9e-08	0.00053	20.2	14.0	1	17	918	936	918	942	0.85
12	13	8.8e-05	0.97	9.8	3.0	1	14	948	960	948	963	0.95
13	13	2	2.2e+04	-5.0	5.1	12	18	1224	1231	1224	1232	0.81

Sequence Information

Coding Sequence: ATGTCTCAGTGGAACAATACATACGCTTACAACAATCAGTACCAAGCCTGGAATGGCGACCCTAATAGCCAATACGTTAACCAAGCCTACTATCCCAATAGAGCAGAACCTGGAAACCAATATGTGAGCTTTAATGAGTTTCTAACTCAAATGCAGAACAATGGTACACCAAACGCTGCTAACTATAGCAATGTGCAATATGAAAACTACCCAACAAGACAATATAATTATCAGAATGTACCTTCCTCCTCTCAGAATCCCCAATTAGACAGTTATGGATATGCAGCTACCTCATCAAATGTATCCAACAGTGCTGAAACATACCCAGTGAATGTACAAAACCAATACAACCCAGTGGCACCTAACCCCAATAATTACACAAATGCTATGATACTCAAATCTAATCTCACTCCTACGGCCACAGAATTTGTGCCAAAACGGTCTATGGTGACACCTTCAACTAGCACTCAGAATATTCCTGAATCAAGTACTGTAAATGATGATAGTGAATCTAGGAATAATTATAGTAATATAAATGAAACCAGAAACCATTATAGTAGTATGAATGATTCACGAAATAATTACTCCAATACAAATGAACCTAGAGGTACTGCGGGTAGTTCTTCAGACACCAATTGGAGAGAGAGACCTCAAAGTTCTCAGCAAAATAATGAAACAAATCATAAAACTGAACCACATCAACGTCCACAAGAAGTCCCTAAAAACCAGGAAAGTAATGGTCGCAACCGTGACAATAATTATCGGAACAATGAATCCAATGGGCGACATAATGAATCTAACAACCGCAATCAAGATTCAGAGAGTCGACAATATGAATCAAATAGTCGTCAACAAGATTCAAGTAGTCGCAACTATGAATCAAATAACCGTAACTATGATTCAAGTAACAAAAGGGGCCAAGCAAAAGCAAACTATAAGTCAAAGAATAAAGATGATGCTCGCACATTCTATAACAGTGGCATAAGTAAGGATAGTCAAGATGTTAGGAATGGGAAAGGAGAAGGTTCAGGGAGGGGGAAGAATTGGATAGGAAGTCAGCGACTTCGAGCAATGGAACGCAACAGCACTGAAGATGAACAATATGCCAACACTTACCTGCAAGGTAGGGAAGAGAGAATGGAACGAGACAATAGAGATAGAGAGAGGGAACGAGATAATAGAGAAAGGGACAGAGACAATAGAGAACGTGACAGAGATTATAGGGAAAGGGACAGAGACAGAGTTACGAAGTCAGAAAATGTTCCCAGTCCTGCTCGGTCTAAAAACAAACATCATAATAATGATAATCAAGTAAACAAAGAGATGACCCAACGTGAGCGTCTGTCTGAGCAGCTAGACAAAGGGACCTTGGAGTGCCTGGTCTGTTGTGATAGAGTCAAACAGTTTGACCAGGTATGGTCATGTAGTAACTGTTACCATGTGCTGCATCTGAGGTGCATTAGAAAGTGGGCCATGAGCAGCATGGTTGAGGGCAAGTGGCGTTGCCCAGCCTGCCAGAACACTAACGAGGCGATACCCATGGAATACCGCTGCATGTGCGGAGCGATGCGCGCGCCGGAGTACCAGCGCGGCGCTGCAGGCGCGCACACGTGTGGGCGCGCGTGCCGACGTGCACGAGCGTGCCCGCACCCTTGCACGCTACTGTGCCACCCCGGACCCTGCCCGCCCTGCCAGGCCACTGTCGTCAAGCAATGTGGTTGTGGAGCGGAGACCCGCTCAGTTTTATGCAGCAGCAAGTTGCCGCAAGTGTGTGGCCGCGTGTGTGGACGATCTCTGCAGTGCGGCGTGCACAACTGTGCCAAGGACTGCCACGAGGGCGCCTGCGACACCTGCGCAGAGACTGTCGAACAAATATGCTACTGCCCCGCGGCCAAGTCGCGCTCGGTGGCGTGCACGGCGGCGACGGGCGCGTGCGCGAGCTGGTCGTGCGGCGACACGTGCGGCCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGCGCACTGCCACGAGCCGCCCTGCCAGCCCTGCCAGCTGCTGCCGCAGAACGTGCTCACCTGTCCCTGCGGGAACACGCAGTTGGCCAAAGATTCGCGCAAGTCCTGCACGGACCCGATCACGCTGTGCGGCAACATCTGCGCCAAGCCGCTGCAGTGCGGACCCACAGGAGACAAACACTTCTGCAAACTTAACTGTCACGAAGGACCCTGCCCAGAGTGTCCCGACAAGACGGTGCTTCAGTGTCGGTGCGGACACTCCAGCCGCGAGGTGCCTTGCGCTGATCTGCCGGAGATGTACAACAATGTGCTGTGCCAAAAGAAGTGTAATAAGAAGCTGTCGTGCGGGCGTCACCGCTGCCGCACGGTGTGCTGCGCGGCGACGTCGCACCGCTGCGCTGTGGTGTGCGGGCGCACGCTGTCGTGCCAGACGCACCGCTGCGAGGAGTTCTGCCACACCGGACACTGCGCGCCCTGTCCGCGCGTCAGTTTCGAGGAGCTAACCTGCGAATGTGGAGCCGAAGTGATCCTGCCGCCAGTGCGATGTGGCACTCGTCCGCCGGCCTGCAGCGCGCCCTGCATCAGAGAGCGGCCCTGCAAGCACCCGCCGCACCACTCCTGCCACTCCGGGGACTGTCCGCCCTGCGTCGTGCTCACCACCAAGCGTTGCCATGGCAACCACGAGGAGCGGAAGACTATACCGTGTTCTCAAGAGGAGTTCTCGTGCGGTCTACCGTGTGGCAAGCCGCTGCCGTGCGGCAAGCATACTTGTATCAAGACGTGTCATAAAGGACCCTGTGACACTGGCAAATGCACGCAGCCATGCATGGAAAAGCGTACCAGCTGCGGTCACCCATGCGCGGCCGCATGCCACGCGGGCGCCGCGCCCGCCTCGGCCGCCGCCGCGTGCCCCAGCAGCGCGCCCTGCCGCCGCCTCGTGCGCGTCACCTGCGTGTGCGCACGCCGCCACGCCGACCGGCCCTGCTGCGACAACGCCAGGGACTACGCCAAGATGATGAGCGCTTTAGCAGCTACAAAGATGTCGGAAGGCGGTTCAGTAGACCTATCAGAAGTACAGCGTCCTGGCAGTATGCTCAAGACTCTAGAGTGCGACGACGAGTGCCGCGTAGAAGCGCGCACGCGGCAGCTGGCGCTGGCGCTGCAGATCCGCAACCCCGACGTGTCGGCCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCGCCACGGCCGCGCGCGAACCTGCCTTCGCGCAGCAGACGCACGACAAGCTTACAGAGCTCGTGCAGCTCGCCAAGAAGTCGAAACAAAAGACCCGAGCGCACTCATTCCCGTCGATGAACTGGCAAAAGCGTCAGTTCATACACGAACTGTGTGAACACTTTGGCTGTGAGAGTGTCGCGTACGACGCCGAACCGAACAGAAATGTAGTAGCAACTGCTGACAGGGAAAAGTCATGGCTGCCGGCGATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCCGGCCCCGTGCTGCGCGCGCCGCCCGCGCCCGCGCCCGCCGCGCCGCCCGGCGCCGGCCTCGCGCCCTCCGCGCTACCCAAGTATGTGCACACTCAAACAGCCACTCACCGCACACCTATAGTGTACCCGATGTGCTGGAGGTGCTGGCGGGCAAGCGGCGCGTGCCCGGCCCCGTGCTGCGCGCGCCGCCCGCGCCCGCGCCCGCCGCGCCGCCCGGCGCCGGCCTCGCGCCCTCCGCGCTACCCAAGTGCTGGCGGGCAAGCGGCGCGTGCCCGGCCCCGTGCTGCGCGCGCCGCCCGCGCCCGCGCCCGCCGCGCCGCCCGGCGCCGGCCTCGCGCCCTCCGCGCTACCCAAGTATGTGCACACTCATACAGCCACTCACCGCACACCTATAGTGTACCCGATGTGCTGGAGGTGCTGGCGGGCAAGCGGCGCGTGCCCGGCCCCGTGCTGCGCGCGCCGCCCGCGCCCGCGCCCGCCGCGCCGCCCGGCGCCGGCCTCGCGCCCTCCGCGCTACCCAAATCAACAAGTGGGTGGGCGACCCTAACGTCAATGAACGCGTGGGCGGCTCGCAGCCAGCCCAAGCCGCAGCAGGCACAGCCGCCACAACCACCTCCAGTGGAGAAGATCGACTACTTCGACAACCCGCCCGACAACTAG
Protein Sequence: MSQWNNTYAYNNQYQAWNGDPNSQYVNQAYYPNRAEPGNQYVSFNEFLTQMQNNGTPNAANYSNVQYENYPTRQYNYQNVPSSSQNPQLDSYGYAATSSNVSNSAETYPVNVQNQYNPVAPNPNNYTNAMILKSNLTPTATEFVPKRSMVTPSTSTQNIPESSTVNDDSESRNNYSNINETRNHYSSMNDSRNNYSNTNEPRGTAGSSSDTNWRERPQSSQQNNETNHKTEPHQRPQEVPKNQESNGRNRDNNYRNNESNGRHNESNNRNQDSESRQYESNSRQQDSSSRNYESNNRNYDSSNKRGQAKANYKSKNKDDARTFYNSGISKDSQDVRNGKGEGSGRGKNWIGSQRLRAMERNSTEDEQYANTYLQGREERMERDNRDRERERDNRERDRDNRERDRDYRERDRDRVTKSENVPSPARSKNKHHNNDNQVNKEMTQRERLSEQLDKGTLECLVCCDRVKQFDQVWSCSNCYHVLHLRCIRKWAMSSMVEGKWRCPACQNTNEAIPMEYRCMCGAMRAPEYQRGAAGAHTCGRACRRARACPHPCTLLCHPGPCPPCQATVVKQCGCGAETRSVLCSSKLPQVCGRVCGRSLQCGVHNCAKDCHEGACDTCAETVEQICYCPAAKSRSVACTAATGACASWSCGDTCGRVLACGAHVCRAHCHEPPCQPCQLLPQNVLTCPCGNTQLAKDSRKSCTDPITLCGNICAKPLQCGPTGDKHFCKLNCHEGPCPECPDKTVLQCRCGHSSREVPCADLPEMYNNVLCQKKCNKKLSCGRHRCRTVCCAATSHRCAVVCGRTLSCQTHRCEEFCHTGHCAPCPRVSFEELTCECGAEVILPPVRCGTRPPACSAPCIRERPCKHPPHHSCHSGDCPPCVVLTTKRCHGNHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCMEKRTSCGHPCAAACHAGAAPASAAAACPSSAPCRRLVRVTCVCARRHADRPCCDNARDYAKMMSALAATKMSEGGSVDLSEVQRPGSMLKTLECDDECRVEARTRQLALALQIRNPDVSAKLAPRYSEHVRATAAREPAFAQQTHDKLTELVQLAKKSKQKTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVLEVLAREAGKRRVPGPVLRAPPAPAPAAPPGAGLAPSALPKYVHTQTATHRTPIVYPMCWRCWRASGACPAPCCARRPRPRPPRRPAPASRPPRYPSAGGQAARARPRAARAARARARRAARRRPRALRATQVCAHSYSHSPHTYSVPDVLEVLAGKRRVPGPVLRAPPAPAPAAPPGAGLAPSALPKSTSGWATLTSMNAWAARSQPKPQQAQPPQPPPVEKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00001680;
90% Identity: -
80% Identity: -