Basic Information

Insect: Shargacucullia verbasci
Gene Symbol: HIVEP1
Assembly: GCA_947562105.1
Location: OX387280.1:10602302-10609218[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 8.4e-05 0.0064 17.2 0.6 1 23 149 171 149 171 0.98

2 7 0.00034 0.026 15.3 1.2 1 23 177 201 177 201 0.89

3 7 1.4e-06 0.00011 22.8 2.0 1 23 545 567 545 567 0.99

4 7 3.1e-05 0.0023 18.5 3.2 1 23 573 597 573 597 0.92

5 7 5.5e-06 0.00041 20.9 0.9 2 23 1002 1023 1002 1023 0.97

6 7 0.00015 0.011 16.4 1.5 1 23 1029 1053 1029 1053 0.92

7 7 0.00068 0.051 14.3 2.6 1 23 1074 1098 1074 1098 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	8.4e-05	0.0064	17.2	0.6	1	23	149	171	149	171	0.98
2	7	0.00034	0.026	15.3	1.2	1	23	177	201	177	201	0.89
3	7	1.4e-06	0.00011	22.8	2.0	1	23	545	567	545	567	0.99
4	7	3.1e-05	0.0023	18.5	3.2	1	23	573	597	573	597	0.92
5	7	5.5e-06	0.00041	20.9	0.9	2	23	1002	1023	1002	1023	0.97
6	7	0.00015	0.011	16.4	1.5	1	23	1029	1053	1029	1053	0.92
7	7	0.00068	0.051	14.3	2.6	1	23	1074	1098	1074	1098	0.93

Sequence Information

Coding Sequence: ATGCCGCTTACACAAGAAAAACGTTTAGATACTAACTTTTCCAATAACAATGATCACAGCTACCTTCACAAGAAATTTAAAAAAATGGCATCTACGATGTCTGCTTTTTCCGGAAATCTACCAAAAACCGGGGAAACCAGACATAAGGAAACAATTGTATCGACATCTGCTTGCAGTCTTTCTATATCAAATGGTAGTATTGCCGCAGCCCACCCAGAAATAGAGAAAATTAAAATTAAAGAAGATAAGCTGCATTTAGAAGTTCAGGATGTCGAGAGAAATGTACAAATTAATTATAATGATGAAAATAGTAGGTTAAGTAATGTAAATAATATTGTTCAAGTAACTGGTCAGACCAGTTTTACTGATGAATTTTCAAATAAGACTGAGAATCTTGAAAATGATTTAATCAAAGAAGCCTACAATGGTGGAGTAGGTGGACGTTATATATGTCCCTACTGTAAATTATCTTGTGCCAAGCCTTCAGTTCTTCAGAAACATATCAGAGCTCATACGAATGAGAGACCATACCCTTGTGTACCTTGTGGATTTGCTTTTAAAACGAAATCCAATTTATATAAACATCGTAGATCAAGAACTCATGCCTTAAGATTGCAAGGAGCTGACGTATCGATAAATTTAAACGATGACGACTTATCAGGAGGTTCTGAAAGTGATACGTCTATTCCGCCTACATCTGTGTCAGAAACTGGTTCTGATGCTTCGATAGTGCGCCCTGAATATTTAGAATCGAATGATTCTTCTGAATTAATTATTGATACTAGCATACCGTCGACCAGTGTGAATTTGTCTTTAATTGATAACAGTAAATCTAAATCAATTTATAAGCCTAAATTTAGGGCAGCATTATATCAAGAAAGCGATGAAAAAGATAAAGTGAAAAAATCCATTTCACCGAATGCTGATTTTCTTACGGAACATATCTCTAAAATTATATCAGATAATGAAGCTATTGTTGATGTTATCGAGACACCATTACAAAAGAAATATGGCAAGATCAAACAAATAGCTGAAAAAGATAGAAAACCAAAATTTTTGCGACCATCGACTTTACCCTTAAAACCTGGCACATTTACGCCTAAAAGACATCACGGAATTACTCCGAATGCTAATACAATGCCACTTGTATCTCCTGAAACTCCCCGCCCCGCTAAAGCTTACGGCCAGCTTTACTTAAATGGAAATGCCTATACGTATCTAGGATTAAAGTGTTCAACAAAAGTATTTTACTGCACTATCAATCGACCTCAACCAACATATGTTCCAAATCAGCATTTTCTATCGATGTACAGTAACTGGCAGTTATTATCCGAGCTGACGCCAGACCCGCTGGGATTGTCAGCATCGTCTGCTATGTCTCTTTATGACTCACGTCATCGACCGCAAAATGTAGCTGTCGCTGTGATTAAACAGGATCTTGTACTGACTCATTCATCGCAATGGAATAAAATTTCAAAGGACAACAAACAGGCAATACAACTGACTGACATGAAGAAAACAGACGAGAATAAATATCCAGTTTGTGACGTAACACAACCTAAAAAGGAGTTGACCGGTGGATTTGAAAGTAATGAAGAATATACGTACGTTCGCGGTCGTGGAAGAGGACGTTATGTTTGTTCAGAATGTGGAATTCGTTGTAAGAAGCCTTCGATGCTAAAGAAACATATCCGCACTCACACCGATGTTCGCCCGTATACATGTGTACATTGCGCCTTTAGTTTTAAGACAAAGGGTAACTTAACGAAGCATATGAAAAGTAAAGCTCACTATAAGAAGTGCTGTGAATTAGGAATAAATCCTAATGAAGGAAATGATGCAGAGAATGGAGAATCGGCTCAATGTTCAGGTGAAACCGACGATGACACAGAATCGGAAGGCGATGAAGGAAATGAAGGAGAAACAGAGTCAAGTGATACCGAAGCTTACAAATCACGGTTACCAGAACATGAGGCTGCTCACTGTTTGTTATCACTAGGAGGATCAAGGCCAACTACGTCAGCTACTCCCGGCTTGATAACTAGCGCTAGACCGTCTACATATCCGTATACACCAACGGGACTGGAAAATTTGAATACAGAAAGTAACCAAGAAACGTCAAATTCAGCACAAAGTTCCCCAATGGATTCGCGAACTAGTTCTGAAAACGAACCTATGGATCTCAGCAAAAATGAAATAAAAACAATTCAACAAAACATTCCTGAAATACCAACCGCCAGAGAATCTAGTGTTTTAGCATCTCTAGCTTCAAATACTGCTAAACTTCCACATCACCAGACCCAGTGGACAAATGGAGAACCAATGTTGCATACATATTTGACAGAAAGAGCACTACATGATTCTAAGATTAAACAAAGTCAACTTACTAGCAGTTTAAGTAAAGTAAGGAAAGTTGAACTCGAAAAATCGACTTTTACCGATAGTTACTGCTCTATGGATTGTAACAATAAGATTGTCACTTCCGTTAAAAGTTTAGTTATGACGCCAGTGTCTTCATCTCAGGTCATTTACAGCGACTCGAAAATTTCGGATATGAATGAAAGTGAAGATTTAGCCACATTTTCAACAAGAGATGATGCTGTCGTGGTTAGACTTTCAGAACCTTCCGTTTCTACTGCTTTAGTCAATGAAGCGAAAGGAAGTCACACACAAGCTCATAGTAATGCAGAAAATGCAAAACATGTAGTATCCGAGTATTTAAAACATGCAAGAATAAATCATATTAAAACACACGATGACAATACACAAAATGATAACGTAAACGACGAAAATAATTTGGCTAAGCTCAACTGCGAAGATAGTACGAACCCCGATGAACACATTTCAGAATCGGACACAGTAAAACTACCATCTTTAGACCATGATCCTGTTGCGAGAAAAGTTGTGATAGGTGTAGGAGGCGTAGCATTTAAAGTAACAAAAGGAAAAGATTTTGAAAATTCTTCTTATTCACCAGGAAGACTAATGGAAGATGGACGTAGAGTTTGTGATTTTTGTAACAAGACATTCACAAAACCCTCACAATTGAGATTGCATCTGAATATACATTATATGGAAAGGCCTTTTAGGTGCAGTGTGTGTGCGGTAAGTTTCCGAACAAGGGGACATCTTCAAAAACATGAACGGTCAGGTTCACACCATAACAAAGTTTCTATGACGTCAACATTTGGAGCTGCAACTTCTTTTAACCCCAGGCCATTTCGGTGTTCTGATTGCAATATAGCTTTTAGAATACATGGACACTTAGCCAAACATCTACGGAGCAAAATGCATGTAATGCGGCTTGAATGTTTGTTTAAATTGCCTTTTGGAACATTCACGGAAATCGAACGCGCGGGAGTTAGTTTAACAGACATTGATACCACAGACTGTGCAAGTTCGCTAGCAAGTTTACAATCGCTCGCACGGAAACTTCACGAAAAGGATCCCACGAAACTTGAGTATAGGGAACCTAATGGTGCGACAATCACAGGCTTTTCCGCTGGTAGGGAGTCCTCTGAAGACGAAGATACCGCCCCTTGCGAAAACATAAGTGAAAGTGAAAAAGATAGTGAAGTAAAGACTATTGAAAGTAATGAAGGTCAAGATAAAGACACGCGAGTTAATTATAGTGCCACAGATATTTAG
Protein Sequence: MPLTQEKRLDTNFSNNNDHSYLHKKFKKMASTMSAFSGNLPKTGETRHKETIVSTSACSLSISNGSIAAAHPEIEKIKIKEDKLHLEVQDVERNVQINYNDENSRLSNVNNIVQVTGQTSFTDEFSNKTENLENDLIKEAYNGGVGGRYICPYCKLSCAKPSVLQKHIRAHTNERPYPCVPCGFAFKTKSNLYKHRRSRTHALRLQGADVSINLNDDDLSGGSESDTSIPPTSVSETGSDASIVRPEYLESNDSSELIIDTSIPSTSVNLSLIDNSKSKSIYKPKFRAALYQESDEKDKVKKSISPNADFLTEHISKIISDNEAIVDVIETPLQKKYGKIKQIAEKDRKPKFLRPSTLPLKPGTFTPKRHHGITPNANTMPLVSPETPRPAKAYGQLYLNGNAYTYLGLKCSTKVFYCTINRPQPTYVPNQHFLSMYSNWQLLSELTPDPLGLSASSAMSLYDSRHRPQNVAVAVIKQDLVLTHSSQWNKISKDNKQAIQLTDMKKTDENKYPVCDVTQPKKELTGGFESNEEYTYVRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPYTCVHCAFSFKTKGNLTKHMKSKAHYKKCCELGINPNEGNDAENGESAQCSGETDDDTESEGDEGNEGETESSDTEAYKSRLPEHEAAHCLLSLGGSRPTTSATPGLITSARPSTYPYTPTGLENLNTESNQETSNSAQSSPMDSRTSSENEPMDLSKNEIKTIQQNIPEIPTARESSVLASLASNTAKLPHHQTQWTNGEPMLHTYLTERALHDSKIKQSQLTSSLSKVRKVELEKSTFTDSYCSMDCNNKIVTSVKSLVMTPVSSSQVIYSDSKISDMNESEDLATFSTRDDAVVVRLSEPSVSTALVNEAKGSHTQAHSNAENAKHVVSEYLKHARINHIKTHDDNTQNDNVNDENNLAKLNCEDSTNPDEHISESDTVKLPSLDHDPVARKVVIGVGGVAFKVTKGKDFENSSYSPGRLMEDGRRVCDFCNKTFTKPSQLRLHLNIHYMERPFRCSVCAVSFRTRGHLQKHERSGSHHNKVSMTSTFGAATSFNPRPFRCSDCNIAFRIHGHLAKHLRSKMHVMRLECLFKLPFGTFTEIERAGVSLTDIDTTDCASSLASLQSLARKLHEKDPTKLEYREPNGATITGFSAGRESSEDEDTAPCENISESEKDSEVKTIESNEGQDKDTRVNYSATDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -