Basic Information

Insect: Shargacucullia verbasci
Gene Symbol: ZNF296
Assembly: GCA_947562105.1
Location: OX387309.1:6220470-6230778[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.095 7.2 7.6 0.2 3 23 117 137 115 137 0.96

2 16 0.0017 0.13 13.0 2.8 1 23 295 317 295 317 0.99

3 16 0.00021 0.016 16.0 0.4 1 23 323 346 323 346 0.96

4 16 0.0011 0.083 13.7 1.8 1 23 351 374 351 374 0.94

5 16 9e-06 0.00068 20.2 0.4 2 23 540 561 540 561 0.98

6 16 0.00018 0.013 16.2 3.2 1 23 567 589 567 589 0.98

7 16 9.5 7.2e+02 1.3 2.7 1 21 652 672 652 674 0.89

8 16 0.87 66 4.5 0.0 1 23 681 703 681 703 0.94

9 16 0.19 15 6.6 0.2 1 14 711 724 711 727 0.85

10 16 0.012 0.93 10.4 4.1 1 23 747 769 747 769 0.95

11 16 0.0006 0.045 14.5 2.6 1 23 775 797 775 797 0.98

12 16 0.0042 0.32 11.8 5.1 1 23 806 828 806 828 0.99

13 16 0.001 0.078 13.7 1.9 3 23 876 896 875 896 0.97

14 16 0.0063 0.47 11.3 3.8 1 23 913 935 913 935 0.96

15 16 1.5e-06 0.00011 22.7 0.7 1 23 941 963 941 963 0.98

16 16 1.6e-07 1.2e-05 25.8 3.1 1 23 969 992 969 992 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.095	7.2	7.6	0.2	3	23	117	137	115	137	0.96
2	16	0.0017	0.13	13.0	2.8	1	23	295	317	295	317	0.99
3	16	0.00021	0.016	16.0	0.4	1	23	323	346	323	346	0.96
4	16	0.0011	0.083	13.7	1.8	1	23	351	374	351	374	0.94
5	16	9e-06	0.00068	20.2	0.4	2	23	540	561	540	561	0.98
6	16	0.00018	0.013	16.2	3.2	1	23	567	589	567	589	0.98
7	16	9.5	7.2e+02	1.3	2.7	1	21	652	672	652	674	0.89
8	16	0.87	66	4.5	0.0	1	23	681	703	681	703	0.94
9	16	0.19	15	6.6	0.2	1	14	711	724	711	727	0.85
10	16	0.012	0.93	10.4	4.1	1	23	747	769	747	769	0.95
11	16	0.0006	0.045	14.5	2.6	1	23	775	797	775	797	0.98
12	16	0.0042	0.32	11.8	5.1	1	23	806	828	806	828	0.99
13	16	0.001	0.078	13.7	1.9	3	23	876	896	875	896	0.97
14	16	0.0063	0.47	11.3	3.8	1	23	913	935	913	935	0.96
15	16	1.5e-06	0.00011	22.7	0.7	1	23	941	963	941	963	0.98
16	16	1.6e-07	1.2e-05	25.8	3.1	1	23	969	992	969	992	0.98

Sequence Information

Coding Sequence: ATGAACCATATGACTGGCACCGTACCTGGCATGGAAATTGATCCGCTGAGCTCATACGAATACCCTTCCTACGATAGTTACCCGTCCCATCCAACTCAACCATACAACTACCAGTTGAAGCTAGAAGAATACTACCAACAGAACAATACCGATTACTTGAACAACGGACACAATGCTACGCAAGACGAGGTGAAAAACCAATTGACATCACTAGACACAAAGGAAGAAAAAAACGATGGTGTAAAAGACTTTAAACCAGTGTTAACAAAGAGAAAAAAGGAGAAGAATGGACAAAAAAGTACTTATTGCTCTGAAAAGATCACAGATGCAACTTTCCCGTTTTATGGATGCTCCGTCTGCAATATTAGTTATACTGGTCTTCACGAATTGGATCAACATGTAACGATACACAAAAATAGGATGACTAGTTATAGATTACGGTTAAGAAATCAAATTAAGAAGAAACAAATTAAAAAAGAAAAGAAAAAGTTAAAAAAGATGATTAAAATTAAAAAAGAAAATGATTTAGATGTTGAAATAAAACCTGAAGATGGGTACATTGGTAACGAGAAAGCAACGGATGTTATTAATAATGGTAACGGAATAAATTCTAAAATGGAATGCAACGGAAACCTAAATAACGGAAACAGTGCAATAGAACCTCTGAATAGTAAAAATAATTCAAATAACAATTTGAATTCTATAAATAACGGTTCATTGAATAACAGTTGCATCAATAGTGAAACAAATTCTATAAGTAACGATGTAGATATAAGTAAAAGAAATGTTAGTAACGATAATAGTACTATGGATAACGGAAATAATATAAATAGTAAAGAAAATAGTATGGATGAGAATGAACTAAATAATTTAGAAAAAATTTACAAATGTTTTGCTTGCCAGAAACAGTTTACTTTAAGTTATTATTTGAAGTTACACGTCAGATCTCACACAGATGAAAAGCCATACACGTGTAATGCGTGTGGGCAGTCGTTTATAACGGCGAGTAAACTCGGGCGGCACAACAAGAGGATACACCTCGCTGCCCGGTTCCAATGTAGGATATGCTTTAAGATATTTTCAAGGTTCGAGCTGTTAACAGCTCACTTTGACAAAAACCATCCCGAAGACAAGCTGGAGGGCGAACCATATGATTACAATGCAATCCTGCCGTACCTCAAAGAGTTGGAGGAGCAGCTTCGTGAGCAGTCGGAGGCCAAAGACAACAAGCCTGCGGGGGACCTAGTGTGGGCAGACGGTGTACCGCGCGACGATACTGGGACACACGACCTGCACGCCGACGTCAAGCAAGAGATCCAAGACGAAGACCAGAAGGATTTCCTGCCGAAACTAAACATAATAGTCGAAGAAGTCAAAGTAGACGTAGAAGACGAAGAAGTCGTAAAAGTCAAAGAAGAGTTGTGTGATGATGGTGATATGTGCGTCGACTTGGGTGATGAGCCTGAGAGCAAGGATGTAAAGGATGAAGACAGCGCGTCAGACTCGGACTACTTCCCGTCCAACACGTGGGCGGCTCCCCCCTCCCCCTCCCCCTCCCCGTGCAGCCCCCGCTCGCCCGCAGCCCCCGCCCGCCCGCGCCGGCGCAGCAGCGCGCGCACGTGCCCGGTGTGCAACAAGAGCATCAGCAGCGCCTCCTACATGCGCGTGCACATGCGCACACACACCGGAGAGAAACCCTTCAAGTGTTACACGTGTGGACGCGGCTTTATTACTAGCAGCAAGATGCACAGGCATGTGCTCACTCATGAACAGGAAAAAGAAGATATCAAAACAGAAGATGATGTCAAACCAGAAGCAGAAGAACAGGACCCACAGGACACCACAGAAGATACCAAGAAGACAACCAAGAAGAAATCCAAAATGAAATCAAAATTGACAACTAAAAAGAAAAATGGAGAAGAGAAGACACGGAAAAAGCACCAGAAGAGACCACACGCGTGTGAATTTTGTAACCAGAAGTTCCTGCACTTGAACATGTTGGAGGTGCACAAGAAGTGTCACGCGGGCGAGCCGCTGGTGTACCGCTGTCAGTACTGCCTGGAGGAGCAGGCGGGCGCGGCCGCACTGCGCGCGCACCAAGCGACGCACGCGGCCGCCGGCGGCCGCCCCTACCTGTGCACCGTGTGCGGCAAGCGGTACAAGAAGCGGGAGACCATGGCGGGCGCGGCCGCACTGCGCGCGCACCAAGCGACGCACGCGGCCGCCGGCGGCCGGCCCTACCTGTGCACCGTGTGCGGCAAGCGGTACAAGAAGCGGGAGACCATGATCTACCACAGGAAGCACCACAAGCCGGACAAGGAGTTCGTGTGCGACATCTGCTCCAAGCGGTTCAAcgcgtcgtgcaagctgcagaagcacctcgtgacgcaccgcgcagacaagttcgtgctgcgctacgagtgccccgtgtgcgcacacatgttcaacaccaagtaccacgtgcacatgcacctcaacacgcaccagaaggaaggcctCATCCTCGAAGAGAATCGCAGCGAAATCCTAGCGATGGTACTGCAGAACGCGCGCAAGATCCCCAAACAAGCGGACGCGCCCGCCAACCTCACCGACATCATACCCTCCGACGAGCGCTCGCGCATCTGCAACATTTGTGGAGAGATCTTCCACCACTTCTACTACCTAGAAGAACATCTCAAGAGCCACGGCTCCCGCATCGCGATAGAAGACATAGAGAAGGCAGAAGAAAAGAAATACATTTGTCAGATTTGTAATAAAGGTTTCAAGTTACATTACTACCTCAAACTCCACAGCTTCACGCACTCTAAAGAGAAACCCTTCATCTGCCAGCAGTGCGGGAAAGGGTTCATCACAAAAGGTAAGCTAAAACGACACTTGGAGACACACACAGGGTTGAAGAAATATCAGTGTCACATATGCTATAAATTCTTCACGAGACCAAGCTATTTGAGGATTCACATCCGCACCATACACGGGAGACAAGATTATAACTTTAGGTTTGACAAAGGGTACGGTCTGGCGCCTATAGCGATGTCTGCGATAACCAATATGTCGGATATCAGCCAAAATAGCGTTTAA
Protein Sequence: MNHMTGTVPGMEIDPLSSYEYPSYDSYPSHPTQPYNYQLKLEEYYQQNNTDYLNNGHNATQDEVKNQLTSLDTKEEKNDGVKDFKPVLTKRKKEKNGQKSTYCSEKITDATFPFYGCSVCNISYTGLHELDQHVTIHKNRMTSYRLRLRNQIKKKQIKKEKKKLKKMIKIKKENDLDVEIKPEDGYIGNEKATDVINNGNGINSKMECNGNLNNGNSAIEPLNSKNNSNNNLNSINNGSLNNSCINSETNSISNDVDISKRNVSNDNSTMDNGNNINSKENSMDENELNNLEKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYTCNACGQSFITASKLGRHNKRIHLAARFQCRICFKIFSRFELLTAHFDKNHPEDKLEGEPYDYNAILPYLKELEEQLREQSEAKDNKPAGDLVWADGVPRDDTGTHDLHADVKQEIQDEDQKDFLPKLNIIVEEVKVDVEDEEVVKVKEELCDDGDMCVDLGDEPESKDVKDEDSASDSDYFPSNTWAAPPSPSPSPCSPRSPAAPARPRRRSSARTCPVCNKSISSASYMRVHMRTHTGEKPFKCYTCGRGFITSSKMHRHVLTHEQEKEDIKTEDDVKPEAEEQDPQDTTEDTKKTTKKKSKMKSKLTTKKKNGEEKTRKKHQKRPHACEFCNQKFLHLNMLEVHKKCHAGEPLVYRCQYCLEEQAGAAALRAHQATHAAAGGRPYLCTVCGKRYKKRETMAGAAALRAHQATHAAAGGRPYLCTVCGKRYKKRETMIYHRKHHKPDKEFVCDICSKRFNASCKLQKHLVTHRADKFVLRYECPVCAHMFNTKYHVHMHLNTHQKEGLILEENRSEILAMVLQNARKIPKQADAPANLTDIIPSDERSRICNICGEIFHHFYYLEEHLKSHGSRIAIEDIEKAEEKKYICQICNKGFKLHYYLKLHSFTHSKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHIRTIHGRQDYNFRFDKGYGLAPIAMSAITNMSDISQNSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00050160;
90% Identity: -
80% Identity: -