Sver017868.1
Basic Information
- Insect
- Shargacucullia verbasci
- Gene Symbol
- dnajc2
- Assembly
- GCA_947562105.1
- Location
- OX387297.1:665581-668002[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00018 0.17 12.3 0.0 3 31 434 466 434 470 0.86 2 2 5.4e-13 5.2e-10 39.6 0.1 3 44 555 600 553 602 0.91
Sequence Information
- Coding Sequence
- ATGACGGAAGGAGACACCATTGAAAGTGGTACGGTGGTGGCGATCCCTTGCCCCTTCGTGAAGAGGACAGTCGAGTGCGCCGGCGCTGCGTTCCTTAGGTATTACAATGTGAAATGCCATGGTGGCGATGCGTTGTTCCAAACGCTCAAGTCCAACGAGAAGGCCGAGGAAGTCATATTCGACGATGACGTCGAATACCTCAGGAGTTTGGACCCTAAAGATTGGAAGATGCAAGATCATTATGCCGTTCTAGGCATGAAGAACTTGCGTTACAAAGCCACTGATGACGAAATAAAACGTGCGTACCGGCAGAAGGTACTGAAGCATCATCCAGACAAGCGCAAGGCGCAGGGCGAGGAGATCCGCAGCGACGATGACTACTTCACCTGCATCACGAAGGCATATGAGATCCTCGGCACACCGGTCAAGCGCAGGTCGTATGATTCAGTCGATCATACAATTGATGACACTGTTCCTTCACAGGCTGATATCAAGAAAGATGGATTTTACAAATCTTTTACTAAACACTTTGAGTCCAACGCTCGTTGGTCAGAGAAGAGAAATGTGCCTTTACTAGGTGACGAGAATAGTACCCGGGAACAGGTTGAAAGGTTTTATGCCTTCTGGTATGAGTTTGAATCATGGCGTGAGTTTTCTTACCTTGATGAAGAAGAGAAAGAGAAAGGTGCTGACCGTGAAGAGAGGAGGTGGATAGAGAAACAGAACAAAGCAGCAAGGGCGAAGCTGAAAAAGGAAGAGATGGCCAGGATACGTAGCTTAGTGGACCTGGCATATGTCAATGATCCAAGGATCCAGCGGTTTAAGCAGGAAGACAAAGACAAGAAATTAGCTGCTAAAAGAGCAAGACAGGATGCCGTACAAGCAAAGAAAGCTGAAGAGGAGCGTCTTGTGAAGGAGGCTCTACTTGCAAAGCAAAAGGCCGACGAGGCGGAGCGAGCGCGCATTGAAGCTGCCCGGGCTGAGCGAGAGCAACTCAAGAAAAACCTGCGTAAAGAGAAGAAAGCTCTCCGAGATATCTGCAAAGCAAACAACTACTACGCCAAAACTGATGAAGAAAATGTCTCTCATATGGCTGCAGTCGAGAAAATCTGTGAAATGATGAAAGTAGTAGAAATACAAGACTTTGTGAAAGAACTAGAGAGCAACGGTAGGGATGCATTTGTCAAAACTGTTAAAGAAACTGAGGAAAAGTTAGAAGCAGAGAGGAAGGCTATATTTGAAACTAGAAGGGTAGAAGAACAAAAGGCCAGGAAAGAGTCTGCTCTCAAACAGCCTATCGAATGGAATGTTGAGTTGACACAACTTCTAATTAAAGCTGTCAACCTTTTCCCGGCTGGAACCAACCAGAGGTGGGAAGTAGTAGCAAACTTCTTAAATCAACACGGCACATTCACAGATGAACGGCGGTTCATAGCTAAAGATGTTCTGAACAAAGCTAAAGATTTGCAAAGCTCGGATTTCTCCAAGAGCAGTCTCAAGAAAGCCGCCAATGAGGAAGCATTTGATCAGTTTGAAAAAGAGAAGAAGAAAGGCTCTAATCACATCGACGACAGTGGAATATCCAAGAGCGACACTCCCGCTAAAGTGGTGAATGGTACAGCAACGCCGAAAAATGAGGAGATCGTTAAACCTGATGACAAAGTGTGGACGAAAACTGAACAGGAACTGCTTGAACAAGCTATCAAAACTTTCCCGGTCAGCACTCCGGAGCGATGGGACAAAATAGCCGACTGTATACCGAATCGTTCGAAAAAAGACTGTATGAAACGATACAAGGAGTTAGTTGAATTAGTTAAAGCAAAGAAGCAAGCCGCCAACCTTGCGAAATAA
- Protein Sequence
- MTEGDTIESGTVVAIPCPFVKRTVECAGAAFLRYYNVKCHGGDALFQTLKSNEKAEEVIFDDDVEYLRSLDPKDWKMQDHYAVLGMKNLRYKATDDEIKRAYRQKVLKHHPDKRKAQGEEIRSDDDYFTCITKAYEILGTPVKRRSYDSVDHTIDDTVPSQADIKKDGFYKSFTKHFESNARWSEKRNVPLLGDENSTREQVERFYAFWYEFESWREFSYLDEEEKEKGADREERRWIEKQNKAARAKLKKEEMARIRSLVDLAYVNDPRIQRFKQEDKDKKLAAKRARQDAVQAKKAEEERLVKEALLAKQKADEAERARIEAARAEREQLKKNLRKEKKALRDICKANNYYAKTDEENVSHMAAVEKICEMMKVVEIQDFVKELESNGRDAFVKTVKETEEKLEAERKAIFETRRVEEQKARKESALKQPIEWNVELTQLLIKAVNLFPAGTNQRWEVVANFLNQHGTFTDERRFIAKDVLNKAKDLQSSDFSKSSLKKAANEEAFDQFEKEKKKGSNHIDDSGISKSDTPAKVVNGTATPKNEEIVKPDDKVWTKTEQELLEQAIKTFPVSTPERWDKIADCIPNRSKKDCMKRYKELVELVKAKKQAANLAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00006232;
- 90% Identity
- iTF_01260055;
- 80% Identity
- -