Sver018771.1
Basic Information
- Insect
- Shargacucullia verbasci
- Gene Symbol
- -
- Assembly
- GCA_947562105.1
- Location
- OX387302.1:4907558-4909930[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.4e-10 6e-07 29.7 0.3 1 45 259 305 259 306 0.95 2 4 1.8e-07 0.00017 21.9 0.1 2 44 313 359 312 361 0.94 3 4 8e-10 7.6e-07 29.4 0.0 1 41 365 405 365 409 0.95 4 4 0.0001 0.096 13.1 0.0 3 46 417 462 415 462 0.92
Sequence Information
- Coding Sequence
- ATGGAATTGAATGATGATGATAATTACAGTGATAGTGACAGCGAAGAGGACATTGCGGAATTGAATAAACTTAAAGCAGTGTTAGAGGAAGAAGACGAAGAACCAAACGAGTCGACGTCGCAATGGACGTCCCTTCACAGCAACACATCTATCAACACGAAATCTTCAAGTCTAATAAGTGCACTAGACGCAGCTATAGCCAACAACAAGTTACTGGACGAAAAACAACACCAGCTCGAGAAAGTTCTGTGCGTGCGTTTACGAGAGTGTCGGCAGAAACTTCAGGTGATTCAGGGTACCTTTTCACAACAAGAAGACCGTAGTGATATATTCCGCTATATTAGCTGTGGGAGACCTTACTTTAAAGATCGGCTTAACTTCCCCGCTCCAGACAATGAAGACGCCAAAATGGCAAAATCACAGATGTATGACTTTTCCCTAGTCATATCGGTACCTGGCTGGACAGTGAGAGATAAGTCTCAACTTATTACAATGATCCACAAAATGTCCATAAGTATTAGGAAAAATGAATTACTGTCGAAAATTAAAGCCTTAAAACGAAAAAACAAGTCAAAATCGAACAAGAAAGTGGAAAAACAAATTGCAGCCCTAAGAAAAGAAGTTGACCTAGTGGCTGAAAAGCCTTTGAGTCAAATAGCTCTTCCAATGGATGAGGAGTATGACTGGGATATGTTAGCCAACAGGTTGAACCGAAGGCATACCGCACAAGAGTATCAATCACTTTGGAAATTATTCTTCCATCCCTCAATCAACAAGAACAGTTGGCTCAAAGAAGAACATAAAGCATTGCAGAGAATTGCTTCTGAAAACAATCAACAGGATTGGGATGATATTGCTGAAAAACTTAACACTGGCAGAACAGGGTACCAATGTTTTGTGTACTATCGCACTAATATGACCAACTCCTTTACTGGCAAAAAGTGGACCAATGAGGAGATTACATATCTCAAGAGATTGATAGATTATTTCAAAGAAGACAGCTATATTCCATGGGGTAAGATAGCAGCAGCAATGGAAAACAGAACTAAAATACAAATCTACAATAAGTATTTGAGACTCATTGAACAAAGGAAGGGCCGTTTCTTACCTGAAGAGGATGCCGTTATTCTCAACTGTGTGGAACGGTTTGGATCCAATTTTAGAAGGATGACCAATTATCTACCTGGCAGATCTATGGTTCAGATACGAGCAAGACATCAAGTCTTGAGTAAAATGAGAATTTCAACTGTATGGACAGTGGAAGATGATAAGAAACTCCTTCAAATAATGAGCAACCAAGATTCAAATATGAACTTTTCAACCGCCACTCAATATTTTCCTGGAAGAAACAGGATAAAAATAAGATCTAGATATGTTACATTATTGAAGTGGATGAAAAAACATCCCAATTTAGATATTGAACATGCACCACGAAGAGGCGCGCGCCGTTTGAATCACGGTAAAGCCAGTGATAACTTGACTGAAGCCGTTGAGAATTTGAAAAACATTTTGAATACTGAAGTTGAAACAAAATCCAAGAAAAAAAAGATCAGTCTAGAATCTAGTGTCACTGAAATAGAGGATGCTATCATTGCTACTATTGTAAACGAACTTGTCAAACAATTTGAAACAAAAAAATCTCCCATTGAAAGTGAACAAATAGTCTTAGGACATGATCATGTTGTGTCTAAGGAACACTTTAATATGACAAACTTGCGTAAATGTCTTATATTTTTGAACGCAAATTTAAACAAGACTGCCTATGAGAACAGCAGATATAGTCAAGAGTATCCAGATTTAGGAGCCAATGAAAAGGATATTTCTTTAGTTAAAGTGAAATCGTACTCTCGAAAGAACACTGTTAGAACTATAAAGATTGACGAGTCTCCTAATATCTGGGGGGACCCTCCCCTTTCTATACGGAACTATGTATTCCCTCCACATTATGCGACCATTACAGGCTGTAGAGCCTTATTGGCACATGTGTGTGCTGCTGCTCCCTACTGTGAATCTGTGAACCTTCATGTATTAGTAAGGAGGAACTCAATTTTGAAAGAGCAGTTAGATCAGGTTCTTGAGCGCTTCTATTTATTGTTTACTTGGCCAATGTTACTATCTAATGAAGGGCCTAATGAATATAATGATATGAAGGTGAATAGAACAGATTCTGTGTTTGTCAGACCTCCTAGCTTGCCAAATCCGCCTGAAGTTACAATTAAGCTTAGATGTATAAAAAAGTTCAAAAATGTAGATGTTGCTGAAGTGATTGATCTGATTGATGAAGATACAAAAAAAGATGAGGTTGTCGAAAAATTGGAGTCTAGTGATGATAAGTTAGAAGAAGAAGAGGAAGAACACCTCCTTTTTAAGTAA
- Protein Sequence
- MELNDDDNYSDSDSEEDIAELNKLKAVLEEEDEEPNESTSQWTSLHSNTSINTKSSSLISALDAAIANNKLLDEKQHQLEKVLCVRLRECRQKLQVIQGTFSQQEDRSDIFRYISCGRPYFKDRLNFPAPDNEDAKMAKSQMYDFSLVISVPGWTVRDKSQLITMIHKMSISIRKNELLSKIKALKRKNKSKSNKKVEKQIAALRKEVDLVAEKPLSQIALPMDEEYDWDMLANRLNRRHTAQEYQSLWKLFFHPSINKNSWLKEEHKALQRIASENNQQDWDDIAEKLNTGRTGYQCFVYYRTNMTNSFTGKKWTNEEITYLKRLIDYFKEDSYIPWGKIAAAMENRTKIQIYNKYLRLIEQRKGRFLPEEDAVILNCVERFGSNFRRMTNYLPGRSMVQIRARHQVLSKMRISTVWTVEDDKKLLQIMSNQDSNMNFSTATQYFPGRNRIKIRSRYVTLLKWMKKHPNLDIEHAPRRGARRLNHGKASDNLTEAVENLKNILNTEVETKSKKKKISLESSVTEIEDAIIATIVNELVKQFETKKSPIESEQIVLGHDHVVSKEHFNMTNLRKCLIFLNANLNKTAYENSRYSQEYPDLGANEKDISLVKVKSYSRKNTVRTIKIDESPNIWGDPPLSIRNYVFPPHYATITGCRALLAHVCAAAPYCESVNLHVLVRRNSILKEQLDQVLERFYLLFTWPMLLSNEGPNEYNDMKVNRTDSVFVRPPSLPNPPEVTIKLRCIKKFKNVDVAEVIDLIDEDTKKDEVVEKLESSDDKLEEEEEEHLLFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00049846;
- 90% Identity
- -
- 80% Identity
- -