Sver004249.2
Basic Information
- Insect
- Shargacucullia verbasci
- Gene Symbol
- kn
- Assembly
- GCA_947562105.1
- Location
- OX387290.1:5248477-5261401[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7e-143 3.1e-139 465.2 0.0 181 387 24 248 20 253 0.99 2 2 4.3e-08 0.00023 19.9 3.8 420 469 257 308 249 419 0.75
Sequence Information
- Coding Sequence
- ATGCCGGCCCAGGGGACCGCCTCCCGAGGGAGCCGGCGACGGCCCGCGGGCCGCGGGGCCACGGGGGGAGAAAGGTTTTTCTTGAAGTTCTTCTTGAAATGCAATCAGAATTGTTTGAAGAATGCCGGGAACCCTCGAGATATGAGAAGGTTTCAGGTGGTAATATCAACTCAAGTGATGGTCGACGGTCCTCTGCTAGCGATATCAGACAACATGTTTGTCCACAACAACAGTAAGCACGGCCGGAGGGCGAAGCGGCTAGACCCTAGCGAAGGTACAGATGGCGCGACAGACAATACTTCAGGTCTATATCCACCACTGCCAGTAGCTACTCCTTGCATCAAAGCGATATCACCGAGCGAAGGCTGGACGTCGGGAGGGTCGACAGTAATCATAGTAGGGGACAATTTCTTCGATGGACTACAGGTTGTGTTCGGGACTATGTTGGTTTGGAGTGAGTTAATAACATCACACGCGATAAGAGTGCAGACCCCTCCGCGACATATACCGGGCGTCGTGGAAGTGACGCTCTCTTATAAAAGCAAGCAGTTCTGTAAGGGCGCCCCTGGAAGATTTGTTTATGTTTCAGCGTTGAACGAGCCAACGATAGATTACGGCTTTCAGAGGCTACAGAAACTTATACCGAGACATCCCGGGGACCCGGAAAAATTACCAAAGGAAATAATCCTAAAACGAGCAGCAGACCTAGCGGAGGCACTATACTCGATGCCTCGGAATAACCAGCTAGGGTTGGGGGCGCCTCGATCGCCGCCCGCCAGCATGCCTTTCAATTCGTACACCGGACAGCTGGCCGTCAGCGTGCAGGACACTGCAGCCTCCCAGTGGACTGAAGAGGAGTACGCGCGCAGCGGCGGCTCTGTCTCGCCTCGTTACTGCTCCGCCGCGTCCACACCTCACGCTGCGCCCGCTGCCTACCCGCATCCACAACACTATCCTGCACCGCCGACGTCACTCTTCAATACTACGTCACTGTCTCTAGGACCGTACCATCCGGCGAACATGAATGGACACTTATCATCTGACCGTCACTATAACGCGTATAATACGAAAGATAGCGGACATTACAGTGAAAGAAATGGGAATTCTAAAAGCCTGGCCGACTGTCCGGTAAACATTCATACAAAATGCACCGGCAGCGATATGAAAGGGGCTCAGAGTAAAGAGACTAAGCTGAGAAGCGCCTTTGCCGTTGTGAGGCAGAGTCCGCCACGGGTTGCCAATGAGCATCATCAGAATTGGCACCACCTCGCCGTTCAGTGTTAG
- Protein Sequence
- MPAQGTASRGSRRRPAGRGATGGERFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGTDGATDNTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPAAYPHPQHYPAPPTSLFNTTSLSLGPYHPANMNGHLSSDRHYNAYNTKDSGHYSERNGNSKSLADCPVNIHTKCTGSDMKGAQSKETKLRSAFAVVRQSPPRVANEHHQNWHHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00784987;
- 90% Identity
- iTF_00176893;
- 80% Identity
- -