Sver005753.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Shargacucullia verbasci
Gene Symbol
arid5b
Assembly
GCA_947562105.1
Location
OX387309.1:5873756-5882854[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.4e-15 6.3e-12 46.0 0.0 3 89 240 313 238 313 0.91

Sequence Information

Coding Sequence
ATGTCAGGCAAGATATCTGAGATCATCTGGCGTACCCTGGGCAGTCGGCCTCGGTATCACCATTACTCAAAATCAAAGGATGAAGTGCTAGCGATCAACGATAAAGTGGTCCTCCGAGCTGATGACCTCCTCAGCTGGATCTGCGACGGCACCGAGTGGCGGTGGGGGCTTCGCGCGGTGTGGCGCGGTGCGTGTGCGCCGCCCGCCGAGCGACGCTCCGACGCGCCGCTGCATCACACCAAACTGGACTTCAGTGATGTGGCCAGCGAAAAGAATAGTATTGTTGAGGATTCGGACGCGCCGGGTGTGGTGGTGTTCTCGTACCCTCGCTACTGCAGGTACCGAGCGCTGGTGGCCCGGCTGGAGGGCATCCAGGCCGACTGGCTGAGGGACTCGCTGGTCGCCGCACTGGGGGGGTACGCCGCGCCAACCAGTAACACCAGGATACTGTACTGTAAGGACACGTTTGAGTATCCGGAGCTGGAGGGTCATGAGTTCGTGTGCAACCACCTGGCCCCTCGGCTGAAGGGCCGGCCCCGCGGGCGCAGGCGGCGCGCGCCGCACGAGCCGTCCCCCGGCCGCTCCGACCGCTCCAACACTGACTCGCCGCCCGCCACCTCGCCCGCCACGCCTCGTCGCCTATCCCTCCGCAATGGCGGCCCCCAACAGAGCGACGAAGAAGAAGAATACAAGAGAACAGAAGACACGCCAGAAGACCGCGCCTTTCTGCACCAGCTCAAGAGCTTCTACAAGCATACCAGCGAGCCCTTCAAGAGCTCGCACGACTTAAAAGACTtGTCCCTGCGCGCGCTGTACGTGACGGTGATGTCGCGCGGCGGCTACGAGGCGGTGTGCCGACACAAGCTGTGGAGGAGCCTCGCGCACGACCAGCCCGCCCGGACACGCAGGCACTACGAGAGATTCCTCCTGCCCTTCGAGAACCACGAACGCAGAAACGGCACATCACTAATATTCAAAATCAACGGGAAAATAGACTCGGAACCCCAAACAATAGCCACCATCGACGTCACCGACTCCCCCCTACGAGACGACGACGTCAAAATACTCCGCACACCATCCCCCAAACTCGAAAAATACGCACCCGATCTCGGAAACCCGGATATCGACAGCGAGACCGGCGAAATCACCTCCAAAGACGAAATCGTACCCAAAAACGCGGAAGAATTAAATAGAGAATTTCTAGAATCTCTGCCTAAAGAAGAGAAGATAGTTAAAATCTCCGTGAAGCCGGTCGAGAAGCTTATTGAGCCGAATGTGGTGAAATTGTATGAAGATAATAGCTTAAATTTGCCCAAACCTAATGTGGAAACCAAAATGGATGACGGAAAGGATTTCACACACAATTATTTGAATGATCTGCAGAAATTTAATATTGCAAGTGAGTCGTTGTGTCGTTCCACCCCACTCAACGGACACGCTGCGCCCGCGCCGACTGACCTCAAGACGTCACGTCCCGCAGGCCGCAGCTCGCTCCGCGCGGTGCGGGTGAAGCCCACCCGTCCACAGCAGCCGCCCTCCAGTACACCTCCGAACCCGCTCCGCCCGGAGTCAGTGTCGTCGTCTCCCCCTCTCCCGCAGCCCGTGACGAACTTCGGCATCCACCACCCGCAGCACAGCGCGCCGCCTGCTGACGACGACATCGTAGAGGTACCCTACAAACCAAAAACTCCAGAAATAATAGACCTCGACGAGTACCCAGAGAGTCCTCAAGCAGTCAAGAAGAAGAAACTGGACATCCTCAAGGAACGAGGCTTGGAAGTCACCGCGCTCCCCCCCTGGCAGCCCCTCCCCGCACAGATGATGACCCCCCCTCTCATGCTCAACCCTGCAGTCCAGCATCAGATCATGACACAAGCACAGCTGTTCCAAATGTACAACATCATCCCGCAGAATTATGCCAACGGGATCCAACCACCGAAGGTTATTCAAGGATCCTCATTCTTCGGCTCTTCTGGTCCAGAGAAAACCGTATACGGCAACCCCAAAGATCCCTTCATGCCCCCACCACACGTGCTGCACGGGGTTCCCGTCAAACCCTTAAGAACTGCCCCCCCGAACCCTACTCCTCAAGATATTTTAGACTTGACCTGTAAATCCAGCACTCCCCCTCCCCAGAAGCCAGCAGTCGAAATAGTAAGACTACCCACATCCTCACCTAATTTAGGAGCTCAAAATTTGTCCAAAAATTACACTCTAGTTGACGGTAAAGCGGTGGTAGGTTCAAACTTAGAAATAACTTTAGTCAATAAGGCTCAGAGTCCTGGAAAGAATAGAGCTCCTCAAAAGCGTTCTAGTAACGGCAAATTCATGTCCACAAAGACCCCTACACCACCCAAAGAGGCTTATCCGAAGTACGCGAGCCCTTCGCACGCTAATATTCAGAAAAAACCGGCCATCACAATACCTAGCTATCAGATCCGTGATGAATCACCAACCAGTTCAAATTCCAACCAGGTGATGCAGATGCAGAAAAACCAGAACTTAGCTCATATAATGGATTTGCAAAAAAGTTCTGCACCCATGACATCGTTTATAGATCCTTATGTCGCGTTGTACAGCAGCCTGGCAGGCCAGATGGACCAGCGCCAGATGGCCATGTACAGAGACCTGATGGCCAACCAATTCAGATACCCTGGATTGTTGAATTTAGGAGTATCCAACACACCAACAACGAAAAATTAG
Protein Sequence
MSGKISEIIWRTLGSRPRYHHYSKSKDEVLAINDKVVLRADDLLSWICDGTEWRWGLRAVWRGACAPPAERRSDAPLHHTKLDFSDVASEKNSIVEDSDAPGVVVFSYPRYCRYRALVARLEGIQADWLRDSLVAALGGYAAPTSNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAPHEPSPGRSDRSNTDSPPATSPATPRRLSLRNGGPQQSDEEEEYKRTEDTPEDRAFLHQLKSFYKHTSEPFKSSHDLKDLSLRALYVTVMSRGGYEAVCRHKLWRSLAHDQPARTRRHYERFLLPFENHERRNGTSLIFKINGKIDSEPQTIATIDVTDSPLRDDDVKILRTPSPKLEKYAPDLGNPDIDSETGEITSKDEIVPKNAEELNREFLESLPKEEKIVKISVKPVEKLIEPNVVKLYEDNSLNLPKPNVETKMDDGKDFTHNYLNDLQKFNIASESLCRSTPLNGHAAPAPTDLKTSRPAGRSSLRAVRVKPTRPQQPPSSTPPNPLRPESVSSSPPLPQPVTNFGIHHPQHSAPPADDDIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPPWQPLPAQMMTPPLMLNPAVQHQIMTQAQLFQMYNIIPQNYANGIQPPKVIQGSSFFGSSGPEKTVYGNPKDPFMPPPHVLHGVPVKPLRTAPPNPTPQDILDLTCKSSTPPPQKPAVEIVRLPTSSPNLGAQNLSKNYTLVDGKAVVGSNLEITLVNKAQSPGKNRAPQKRSSNGKFMSTKTPTPPKEAYPKYASPSHANIQKKPAITIPSYQIRDESPTSSNSNQVMQMQKNQNLAHIMDLQKSSAPMTSFIDPYVALYSSLAGQMDQRQMAMYRDLMANQFRYPGLLNLGVSNTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00049682;
90% Identity
-
80% Identity
-