Sbem017249.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sesia bembeciformis
Gene Symbol
nfxl1
Assembly
GCA_943735985.1
Location
CALSEZ010000766.1:118478-120949[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 2 2.4e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 18 0.065 7.6e+02 0.7 0.4 4 10 169 175 168 175 0.96
3 18 1.9e-07 0.0023 18.3 15.5 3 19 186 202 185 202 0.95
4 18 4.3e-08 0.00051 20.4 13.1 1 19 237 255 237 255 0.93
5 18 0.57 6.7e+03 -2.4 2.0 6 10 280 284 279 284 0.90
6 18 1.2e-09 1.4e-05 25.4 12.0 1 19 290 308 290 308 0.99
7 18 1e-06 0.012 16.0 18.3 3 19 345 361 337 361 0.86
8 18 2 2.4e+04 -5.3 2.2 5 10 384 389 384 389 0.88
9 18 2.9e-06 0.035 14.5 17.2 1 18 395 412 395 413 0.97
10 18 2.4e-08 0.00029 21.2 18.4 1 18 422 439 422 440 0.98
11 18 0.0002 2.4 8.6 6.4 9 19 488 498 486 498 0.89
12 18 0.00057 6.7 7.2 7.7 1 12 508 518 508 518 0.96
13 18 0.4 4.7e+03 -1.9 2.7 15 18 548 551 547 552 0.86
14 18 0.43 5.1e+03 -2.0 9.7 5 12 565 572 561 582 0.86
15 18 9.1e-06 0.11 13.0 5.3 1 11 588 598 588 599 0.97
16 18 0.64 7.5e+03 -2.5 1.2 15 18 613 616 612 617 0.82
17 18 7.5e-05 0.89 10.0 15.0 1 18 628 645 628 646 0.84
18 18 0.00019 2.3 8.7 11.3 1 16 687 701 687 707 0.87

Sequence Information

Coding Sequence
ATGGCGCGAAGATATCGTGATGCCGCCGCAAAATTGCAACAAAATGTTCAAAAACATTTGAAAGAAATGAAGGATTTGTCTTCTTCGGACGATGAGGAGCCATTTGAGTCCAGCTTGTTGGATGGGGTACTTCAGAGCTACACAAACGGCGGTGGCGACACTCAAATGCTGCGGCGAACTAAAAATCTTCTAGAAGAAGCAATAAGCGGCCACCCGGTAACTTGCCTTATATGTATAGGATCAATAAAACGATCTCACGCTATCTGGTCCTGTGAACACTGCCACTCCTACTTCCATCTCTCTTGCATACAAAAATGGGCCAATGACAGCATAAGTCTGAGAAATGAGGAGAATCAGGCCCTCATAAGCGTTTTTAAGCCCCAGAAAATGGAATGGTGCTGCCCTAAATGTCGCCACACATACACTAAGGACGAAATACCTCGTAGGTATCGTTGTTTCTGTGCTAAAACTGATGACCCACCTCTCCATCCATGGTTATTACCACATTCTTGTGGTGAAGTGTGTAAAAAGGCACTCTCTGCTGGAGATAATTGTAGACATAAATGTCTGCTACTATGCCATCCTGGACCGTGTCCTCCCTGTCCTCAAACTGTGAATGGGATATGTTATTGTGAGAAGGAGAGGAAGAAGGTAAGATGCAGTACTGCTAAATGGTCTTGCGGTAAGCAGTGTAAGAAAACACTCTCTTGTAATACACACAAATGTAGAAATCTTTGCCATGAAGGTGACTGTCCTCCCTGCACCTACACCAGTATGCAGTCCTGCCAATGTGGAGCAGAAAAAGTGCAAAGACCATGTAACAATCCTGTATGGCAATGCCAGAAAGTTTGTAACAAAGCATTACCTTGTGGATATCATAAATGTGAAGAAATATGCCACTCCGGAAGCTGTAATACATGTCCCAATTCAGGCACAAAATCTTGTCCCTGTGGTGCCAATCAACGCTATGTCCAATGTCCCGATGTCATGGAAACTTGTATGGGCACATGTGGAAAGAAGCAGAAAGATTGTGAACACAGCTGCCCAGAGAAATGTCATAAAGGCCCCTGTCCTCCTTGCCAAGTACTGATAGAAAAGATATGTCAATGTTCTACTCATACAAGATCATTGCCGTGCAGTAAAGAATTTAAATGTGAAACAAAGTGCCGTAACATAAGACCATGTGGCAAACATACTTGTGGACGTAGATGCTGCGATGGAAATTGCCCTCAGTGTGATAAAATCTGTGATAAACCTCTTCAGTGTGGTCGTCACAAGTGCTCCTCTGTTTGCCATCATGGCCCATGTTACCCTTGTCATCGAGAATCGAAAATAACCTGCCGCTGTAAGGAAACATTTATAACAGTTCCATGTGGCAGAGAAAAACATGTCAAACCTCCAAAATGCTCTTTTCCTTGCAAAATAAAATATAAATGTCGTCATATTGAAGAGAACAAACATTCCTGCCATTTTGGTGACTGCCCGCCATGCAAAGCAATTTGCTACAAAACCTATGAAAAGTGTGGACATGAATGCAAAGCAGTTTGTCACGAGTATGTAGCTGTTGTTTTTAAACAAGTGGAAAAGCCAGCTACGCCATGGGAGGTGCAGCCTCCAAAGACTAAAATAATGACCTTACATTGTCCACCTTGTGAAACACCTGTTCCAATTACTTGTTTCGGGGAACACAATACATGTAATCAGCCTTGTCATTCGGCTGCTCGCCATCCCTGCGGACGTGAATGTGGTCGTCCATTGCCCTGTGGCAATCATAAGTGCACACTTCTGTGCCACCTTATGTATTCTGATCCCGACTATCCAAATGTGCCTTATGCTTGCGAGCCTTGCAATAAAGAATGCATGGTTCCCCGTCCAAAAAATTGTTCTCATAAATGCACAAAGCGTGCTTGCCACCCTGGCTCGTGCCCACCATGCGAGGTTCTAGAAAGAATTCCTTGTTACTGTGGTATTACAGAGGTCTACTTGCGTTGCCGCGAGCTGTCTACATCTGCAGGAGAAATGTTGTCTTGCAAACAGCAATGCCCTAAAAATTTAGAATGCGGGCATAGATGTCGAAATACATGCCATTCTGACCCATGCGGACAAAATCAAGTTTGTAACAAGAAGAGTAAAATATCTTGTCCCTGTGGCAATATGAAGAAAGAAGCTCCGTGCAAACTTGTAAGGAAAGGTGAAATTAAACTCTTATGTGGTGCAAGTTGTGAAGAAAAGAAGATTGCTACTCAAATAGAGAAGGAAAAAGAAGAACGTATATTGAAGAAAATGGAAGAGGAGAAGAATCGTAAAGAATTAGCGGAATATGAGTGGAAATTGAGCGGTAAAAAAAAGAAATATAAGGAGAAGAAAGTTGTTGTAAACAAAGACAACAGAAGTTGGTTGCAGAAATATTGGGTTACTTTGATGTCAATTATTGTTGTGTCGGCGGCAGTTTATATCATATTTTATGTGTAA
Protein Sequence
MARRYRDAAAKLQQNVQKHLKEMKDLSSSDDEEPFESSLLDGVLQSYTNGGGDTQMLRRTKNLLEEAISGHPVTCLICIGSIKRSHAIWSCEHCHSYFHLSCIQKWANDSISLRNEENQALISVFKPQKMEWCCPKCRHTYTKDEIPRRYRCFCAKTDDPPLHPWLLPHSCGEVCKKALSAGDNCRHKCLLLCHPGPCPPCPQTVNGICYCEKERKKVRCSTAKWSCGKQCKKTLSCNTHKCRNLCHEGDCPPCTYTSMQSCQCGAEKVQRPCNNPVWQCQKVCNKALPCGYHKCEEICHSGSCNTCPNSGTKSCPCGANQRYVQCPDVMETCMGTCGKKQKDCEHSCPEKCHKGPCPPCQVLIEKICQCSTHTRSLPCSKEFKCETKCRNIRPCGKHTCGRRCCDGNCPQCDKICDKPLQCGRHKCSSVCHHGPCYPCHRESKITCRCKETFITVPCGREKHVKPPKCSFPCKIKYKCRHIEENKHSCHFGDCPPCKAICYKTYEKCGHECKAVCHEYVAVVFKQVEKPATPWEVQPPKTKIMTLHCPPCETPVPITCFGEHNTCNQPCHSAARHPCGRECGRPLPCGNHKCTLLCHLMYSDPDYPNVPYACEPCNKECMVPRPKNCSHKCTKRACHPGSCPPCEVLERIPCYCGITEVYLRCRELSTSAGEMLSCKQQCPKNLECGHRCRNTCHSDPCGQNQVCNKKSKISCPCGNMKKEAPCKLVRKGEIKLLCGASCEEKKIATQIEKEKEERILKKMEEEKNRKELAEYEWKLSGKKKKYKEKKVVVNKDNRSWLQKYWVTLMSIIVVSAAVYIIFYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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