Basic Information

Insect: Sesia bembeciformis
Gene Symbol: -
Assembly: GCA_943735985.1
Location: CALSEZ010000609.1:357743-362463[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0014 0.098 13.5 5.5 1 23 981 1003 981 1003 0.98

2 10 0.48 33 5.6 3.5 1 23 1008 1030 1008 1030 0.97

3 10 0.0046 0.31 11.9 2.8 1 23 1036 1058 1036 1058 0.97

4 10 0.57 39 5.4 2.1 5 23 1065 1083 1062 1083 0.95

5 10 0.14 9.7 7.3 0.2 1 20 1089 1108 1089 1110 0.94

6 10 0.62 43 5.2 0.1 2 13 1130 1141 1129 1145 0.84

7 10 0.035 2.4 9.2 1.8 1 23 1148 1171 1148 1171 0.92

8 10 0.13 8.8 7.4 3.8 1 23 1177 1199 1177 1199 0.98

9 10 6.3e-05 0.0044 17.8 2.1 1 23 1205 1227 1205 1227 0.97

10 10 0.0061 0.42 11.5 1.2 1 23 1233 1255 1233 1255 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0014	0.098	13.5	5.5	1	23	981	1003	981	1003	0.98
2	10	0.48	33	5.6	3.5	1	23	1008	1030	1008	1030	0.97
3	10	0.0046	0.31	11.9	2.8	1	23	1036	1058	1036	1058	0.97
4	10	0.57	39	5.4	2.1	5	23	1065	1083	1062	1083	0.95
5	10	0.14	9.7	7.3	0.2	1	20	1089	1108	1089	1110	0.94
6	10	0.62	43	5.2	0.1	2	13	1130	1141	1129	1145	0.84
7	10	0.035	2.4	9.2	1.8	1	23	1148	1171	1148	1171	0.92
8	10	0.13	8.8	7.4	3.8	1	23	1177	1199	1177	1199	0.98
9	10	6.3e-05	0.0044	17.8	2.1	1	23	1205	1227	1205	1227	0.97
10	10	0.0061	0.42	11.5	1.2	1	23	1233	1255	1233	1255	0.93

Sequence Information

Coding Sequence: ATGTTTCCTCTGCTTACTTTCAGAAGAACACAACATTTTATTGAAGCACACGCTGCTAAAAGACATTTCATATTACAAAATGATTTAAAACTAAACATCGATCAGAATAACGTTGCAAAAGGGAATACTATATCGGTAAATAATAATATAACACCACAGTCAGATAATCGTGTCAAAGAAAATGATATATTACAAACATCTGGACCAAATATCTCACAGAAAAATCTTGCAGATGAGATTAAGTTACAGAATAATATAATATTAAAATCAAACGTCAGTGGAAAGAACTTAAAAGAAGAAGAAGAAGAAGCGAATTCCTTGATCCAAAATAATTTAACTATAAATGCACCTGTCAAATTTAATTCATTTATAGTCAACAATAGTATTATACAAAATCCTATTATAGCAAGTAGTCCCAATTTCAAATCCAACTTTATTGTTTACGTTCCCATAGAAAATAATACTAATTATCAAGGAAAATTAATTCAATATAAATCAAATGTTAAAAGTACTCTTCTGGCCGTACCACAGTTATCTACAAAACTGTCAACCGTAGAAACAGTCGAAAAATCGACAGTTATTTCCAAAGAAAATTCCATTACAGCTTTTAATCCACTTCTGAAAACTTTTGCAATTTTACAAGAACCAATGGGAAACTTAGCAGTACCAAAAGTTGCAATGGCTCATAAAACAACTTCAGACAATTTTAAAAAGAATACAGTAATCGCTTCAAATAATTTTATTTCACAACCAACATCTGATATAAGCAATGAAACCATAAAGAATTACGTGGAGGAAGAAGATCCAACCATACAAGAAATTAATGAAATATTGTCTGATATGATTTCTGAAAGCACTGTAAAAGAGAATAACGACATGGAAAACAATTCAATGAAAAATTATCCAAACACACAAATTTATTTAAATCTAGTTGAAGAATTTAATAATTTTCCTAAAGAAACTCCATGTATTATGAAAAATGCAATTGCTGATAATAATGAAGTCCTTGACTGTAAAAGCCCAGAAGAAAACCTTGATTTGAATCAAAACTTTAGCAATAATTCAAATGCACAAGATAACCGAAATATGGAATATAATTATAATACAGATAATGAAAAGAATAGTACTGTTAATAACTTTGAAAAAGCAGTTAATAGTCCAATAATGAAAGGATTCGACTTGGATTTAGACATGCCCACCCCACTCATGGAAGAAATATTGTTCGACAATGAATACTCAATTTTGTCTGATACAATTGCTAACGAAATATACAATACACAATTAGAAAATCACAGTACATTCAACAAACATGATACCAACCTACAAAATAATTCAGATGGAGAAAATACACAATTTACTCCAATGTCAAGGGAATTTAGCAACATTGAAACTGTTACACATGTACAAGAGAATGCAATAATTAAAAATCAAACACAAGAATATCGAACTGAAAGTGAGCTCGATATTGGGAAACGAACGAAAAGAAGCCAGGCTGTAGCAAACGAAATAATAAATTTTAGCATGCTCAATGTAGAGAATAAAATAGGCTTCACAAAAGAAGAGGAAACAAAGAAGAGAAAAGGTGATGTAAAAACAGGAAAATTCAGTAAAGTTTTAAATTCAATTGCTGAAGGATTTAAAACAGAACTGACGTTTATAGAAAAAAAGCACAGCGAGGAAAGTATTAAAGAAATAAATAATTCCACAAACTTAATCACAGTTTCAAAAGAAAACCAATTAAATGTAACATTTAATATTCTAGACGTTGCACCCAGAAAAGACAGCAACGTAAATATATACGAACTTGATAAAGTTATAGAGCCATTTCCAATTACAGAAGTAAATCACACGCACATACCATTTAATGAAGCTGCAGGTGATGGGTTTGTTGAGTTAAACCCTATAGCGTCGTATGATCTCATACCAAAATTAATGCCAAAAATTAAACAAATGACTGAAAATAATGAAATATTGGATCTAAATCTAATATTGGAGTTCGATAAAATTACTGAGAAAAATCGAGTTGAAGATGTAAGACTTAAAATGGTTTACAATACGATAACACATGAAAATGAATTTAATCACACTTTACCTATAGTCAACACAAATACCAGTGAAAATGAAATCGCTGGACTAAATCCAATCATAGAATATAACGAGAAACCATCACATTTTATTGAAAATCTGGATTCTATCTTAGATTATAATGAAGCAAACGAAGGAGAGAAGCAAATAAATTTGTCAAAAGAAAATCTCTCTGACGATTTGCAATTGATTTTAAAGCAGTTCAACGAATTCGATAATAAGAGTAAAGACGCGCAATTAAGAAAGAAGGAATATAAGAAAAACAAGGTAAATAAACTTAAATTAAAAAGCCAGCCAAGATCAGAACACAAATCTAAATTAAAGAAACATTCCGTATCCGTAAATAAACTAAAAAATTCAAGTCTCAAGGTTCAGAAGAGGAAATCAAAAGTAAAAATTGATTCGATCGATACGAAAGACAGATCTGACAAAATTAGTAAAAAGTCAAAAAATAAATCAAAGAGGAAATCTAAGAAATCGCGTAAAAGAAAACATTCCGGTAAAGCCGATGGTGAACCAAATAAAAAAAAGAAAAGAAATGGTGAACATAATGTAGAAAAACAAACCATAGAAATGCACAGAGAATTTTTAGAAAAGGTAAAAATCGACATACAAGATAATGGAAAAAGTACAGTAGATATTAAAGGCTTTCCAGAGGACAACGGTACGCAGAATATGGAAGGGAAGCCGGAAAGACTTTCAGGGAGGAAAAAGAAGGAAAAGCATACAGAAGGTAATAAAAAGAACGCAGAAGAAACTTCAGATAAGAAAAAGAATAAGAAAAGGTTGAAAAGCGAAAAAATAGAAGAATCTAAGAAAGATTTAgatgATGACAAGGGTGAAGTCCGCCGCCCCTTCCGCTGTCACATTTGCTTGGCCCGCTTCACTCGACATTACAACTTGAACGAACATCTAACACGACATACCGAGAAAATGTTCATTTGCACCACATGCAAAGAGCCCTTCTCCTGCGTCCGATATCTGTCTAGGCACGTTAAAAAACATGGAAAAATGTTCCCCTATAAATGTAACGAATGCGATCAGGAATACGAGACCTACAAACAGTATTCGCAGCACCAACAGTTCCATAAACGCTCATTTAAGTGTCACTGCGGGCTAATTTTCAATTCCAAATCGCTTAAAATTGTACACGAGCGATCACATTTAGGGCAGAATTCTTTTTACTGCCGCGTTTGCGCAAGAGGCTTTAATGACCAAATGGATTATAAGCAGCACGAATTGCTTTGTTCAAGTATCAAAAATTATTGCCAAGTTTGTGATGCATACACCCATGAAGTCGACAAATGCCCGGTCTGTGACACTCCGTTTTCCGTAAAGAATTTGATGGATAAGCCTTTCAAATGCACGCTTTGCGAACGGCAGTATATGAGCAAAGCGCGCTTAACTCGTCATAAGTTGGACACGCATAAAGGCATGATGCGTTTTAAATGCAAATGTTGCGGTTTCAAATCCTCTGATCGCGGCAATTTTATTGCCCATAAAAGACTCCATACAGACGACAGGCCTTTCGCTTGCTCGTACTGCCCAAAAAGATTCACCCACGGCCCTACTTTGACTAAGCACCTCCGTTTACATGTGGGAGTCAGTCCTTTCATTTGCAAATTTTGCCAGAAAAGATTCAAATTGGAAATCGACTTACAAAAGCACGAGGACTTGCATGTAAAAATAATTGGTAATCCAATGATCAGAAAATGA
Protein Sequence: MFPLLTFRRTQHFIEAHAAKRHFILQNDLKLNIDQNNVAKGNTISVNNNITPQSDNRVKENDILQTSGPNISQKNLADEIKLQNNIILKSNVSGKNLKEEEEEANSLIQNNLTINAPVKFNSFIVNNSIIQNPIIASSPNFKSNFIVYVPIENNTNYQGKLIQYKSNVKSTLLAVPQLSTKLSTVETVEKSTVISKENSITAFNPLLKTFAILQEPMGNLAVPKVAMAHKTTSDNFKKNTVIASNNFISQPTSDISNETIKNYVEEEDPTIQEINEILSDMISESTVKENNDMENNSMKNYPNTQIYLNLVEEFNNFPKETPCIMKNAIADNNEVLDCKSPEENLDLNQNFSNNSNAQDNRNMEYNYNTDNEKNSTVNNFEKAVNSPIMKGFDLDLDMPTPLMEEILFDNEYSILSDTIANEIYNTQLENHSTFNKHDTNLQNNSDGENTQFTPMSREFSNIETVTHVQENAIIKNQTQEYRTESELDIGKRTKRSQAVANEIINFSMLNVENKIGFTKEEETKKRKGDVKTGKFSKVLNSIAEGFKTELTFIEKKHSEESIKEINNSTNLITVSKENQLNVTFNILDVAPRKDSNVNIYELDKVIEPFPITEVNHTHIPFNEAAGDGFVELNPIASYDLIPKLMPKIKQMTENNEILDLNLILEFDKITEKNRVEDVRLKMVYNTITHENEFNHTLPIVNTNTSENEIAGLNPIIEYNEKPSHFIENLDSILDYNEANEGEKQINLSKENLSDDLQLILKQFNEFDNKSKDAQLRKKEYKKNKVNKLKLKSQPRSEHKSKLKKHSVSVNKLKNSSLKVQKRKSKVKIDSIDTKDRSDKISKKSKNKSKRKSKKSRKRKHSGKADGEPNKKKKRNGEHNVEKQTIEMHREFLEKVKIDIQDNGKSTVDIKGFPEDNGTQNMEGKPERLSGRKKKEKHTEGNKKNAEETSDKKKNKKRLKSEKIEESKKDLDDDKGEVRRPFRCHICLARFTRHYNLNEHLTRHTEKMFICTTCKEPFSCVRYLSRHVKKHGKMFPYKCNECDQEYETYKQYSQHQQFHKRSFKCHCGLIFNSKSLKIVHERSHLGQNSFYCRVCARGFNDQMDYKQHELLCSSIKNYCQVCDAYTHEVDKCPVCDTPFSVKNLMDKPFKCTLCERQYMSKARLTRHKLDTHKGMMRFKCKCCGFKSSDRGNFIAHKRLHTDDRPFACSYCPKRFTHGPTLTKHLRLHVGVSPFICKFCQKRFKLEIDLQKHEDLHVKIIGNPMIRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -