Basic Information

Gene Symbol
Mtf1
Assembly
GCA_943735985.1
Location
CALSEZ010000068.1:1628719-1637817[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 8.3e-06 0.00057 20.6 0.8 1 23 113 137 113 137 0.99
2 9 0.00025 0.017 15.9 0.4 1 23 143 167 143 167 0.98
3 9 0.00018 0.012 16.4 0.4 1 23 173 197 173 197 0.96
4 9 1.5e-06 0.0001 22.9 1.6 1 23 202 226 202 226 0.97
5 9 5e-05 0.0034 18.1 4.3 1 23 232 256 232 256 0.98
6 9 0.001 0.071 14.0 0.3 6 23 269 286 262 286 0.91
7 9 0.039 2.7 9.0 1.0 1 23 295 319 295 319 0.92
8 9 0.22 15 6.7 0.6 1 22 338 361 338 361 0.92
9 9 8.4 5.8e+02 1.7 2.3 2 23 735 758 734 758 0.93

Sequence Information

Coding Sequence
ATGGCCGCATGGCCCGGTGACAGTACTCTGTCTGGCGATAACACTACTCAAAACAATTTCGAAAGTATTTTGAAAGAAGATTTTATCGTAAAAATAGGTTACGGAACATTTGATAAAGATTTTGGAAATTTTCAAGAATATAATTACGACAAAGAAGTGTATAACAACAAAGTTAAGTTAGAAATCCTAGAATCATCCAAGGACAATAATAGAGATGATCACAGTGAATTGTTATCACACAATGACACAGTACCCAGTCTCCCAAAGCCTAATGTGGAAGGGCCAAATTCAAACATGGAGAAAAATAAAAGGCGACCAGAGGACAACAGTGCAAGGTATAAATGTGAATATGACGGGTGTGAGAGAACATACAGTACAGTTGGAAATTTGCGGACACACATGAAAACACATAAAGGTGAATACAGGTTCAAATGCCCAATGCAAATATGCAACAAAGCATTTCTCACATCATACAGTTTAAAAATTCATGTCCGAGCTCATACTAAAGCAAAGCCTTTTGCTTGCAATATTGGAGTTTGTAAGAAAGCCTTCAACACTCTATACAGGCTCAGAGCTCACCAAAGATTACACAGTGGGGACACATTCAACTGTAAAGCAGATGGGTGCACAAAATTCTTTACAACACTCAGCGATCTCAAGAAACACATACGAACACATACACAGGAAAGACCATATAAGTGTCGCACCGAGGGCTGCGGCAAGTCCTTTACAGCGTCGCACCATCTGAAGGCGCACTCACGCACGCACTCGGGCTCACGGCCGCACGCGTGCGCCGCGCCCGCCTGCGGCAAGCTCTTCTCCAGCGCCACTAGTCTGCGGGCACACGTCAGGAAGCATCAGGTGAATATCGAGTGTGGTGAATACAGGTGTCGTACAGAGAGCTGCGGCAAGCTCTTCTCCAGCGCCACTGGTCTACGAACACACGACAGGAAACACCAGCTAGTCTGCGGGTACCCCAGGAAGCACCAGGTGAATACCGAGTGTTTTGAACACAGGTGTCGTACAGAGGGCTGCAGCAAGCTCTTCTCCAGCGCCACTAGGCTACTAGCCCACGTCAGGAAATACCAAATTGAAGCCGAACCGCCAAGTATAAAAATCACAAAAATTGAAGTGGCAGACCCAGTAGTCCAACCCAAACCAGTTAACGATTTCATGAACTGGGATGGCCTTCTGGAATCCTTTGGTAAAATTACTACAGAATCCAACTCAACTGATGGCAGCTTAGAGGACATAACCAGGGTCAATCCATTGTCGACCAATAACGTAGACATAACCGAACTGCTTTTTGATAACGCTACTAACACAACTAAACTCAACGAAACAGCTAACTTAGATTATGACTTAACCAGTTTAGATGTAACACTATCTCCCTTCGTAGAAAAGAAAAAGGACTCAATTGAAAATTCTTGGGTAGATGTGAGCGATTTACAAACCATAGTGCCTTTGCCAGTTGAAAACAAAATGGAGATTAAAACTAAAGCGATGCAACTGGCTTTAGCCAATGAGATAGAAGTACAAGCTCCTTGGGTCGATGTCAGTGCTTTAGCGGCTTCTATATCAGAAACGCCAGTCAGTATCAAAGAAAAAACGCCAGAAAGCATTTTTACTCTGGCAACATTTGTTCCCACACATATGCAGAGTTACATAGACTTAAATACCGAAATGGCCCCAACTGCCAACCTTCTGTCACAAAGTTCTTTTGACTTAGATACACCGAACATTTTAGATGTAGGGGATAAAGTATTTAACGACAGTCAGTTGGTCTCGAATCTTGAAACAGACAAATTGGACTCAGAGTTTGATTTCTTACAAGCACACGATCTCCATGACGATAGATCTCTCAACACTCCCCCACCGTCTAAAGTACAGCAGAACTTTGAAATAAACCCCGCTAATTCTGTTTTATTCAACACAGATTTAGCTTTAGAAGACACGTTATTATTTGATAACGAACCACCTTCGGATATGTACGTAGTGAGAACTGAGAACATATTTGGTAAAGAAATAGCGAAGAGAAATGCATTGGAACAATTGGCAGCTGACGCTGGAATTTGCTCGTGTTCCGAATGCAAATGCGATCCTTCGGGCGGAGAATGTAGGAACTGCGGTCATGAAAGTGAGAGAAAGTGTACGGAAGATAAATGTTCTTGTGTCGATTGCAAATGTGATCATGCTACTATGAAATGCGCTATTGGATGTGGTCTAGCAACAGATACTAACCATAACACGTTTTTGCATTACCATCGTCGGCATAATAATTCTAGTTTGGAAGAACTGGGCGTTTATACGCATGACGATGACGTGCCCGCAAAGGAAATAGTGGATAATTTAGCCTGCTCTTGCCAGAGTAAAGATAAAAAATGCTGTGTTGATATCAGCAAAGCTAGTTGCCCTGAAGAATCAGATGCTTGTTGTGGAAAAGATAGCTCTAAATCATGTTGCGTGACGATCTGCTTCAAGAAATTAGATGCATTCAAACAGTTCCTCTCCGATAATGATTTGTTGAACGCACTAAAAGCACACAACTTAAATGTCACCTCAAGCTTATAA
Protein Sequence
MAAWPGDSTLSGDNTTQNNFESILKEDFIVKIGYGTFDKDFGNFQEYNYDKEVYNNKVKLEILESSKDNNRDDHSELLSHNDTVPSLPKPNVEGPNSNMEKNKRRPEDNSARYKCEYDGCERTYSTVGNLRTHMKTHKGEYRFKCPMQICNKAFLTSYSLKIHVRAHTKAKPFACNIGVCKKAFNTLYRLRAHQRLHSGDTFNCKADGCTKFFTTLSDLKKHIRTHTQERPYKCRTEGCGKSFTASHHLKAHSRTHSGSRPHACAAPACGKLFSSATSLRAHVRKHQVNIECGEYRCRTESCGKLFSSATGLRTHDRKHQLVCGYPRKHQVNTECFEHRCRTEGCSKLFSSATRLLAHVRKYQIEAEPPSIKITKIEVADPVVQPKPVNDFMNWDGLLESFGKITTESNSTDGSLEDITRVNPLSTNNVDITELLFDNATNTTKLNETANLDYDLTSLDVTLSPFVEKKKDSIENSWVDVSDLQTIVPLPVENKMEIKTKAMQLALANEIEVQAPWVDVSALAASISETPVSIKEKTPESIFTLATFVPTHMQSYIDLNTEMAPTANLLSQSSFDLDTPNILDVGDKVFNDSQLVSNLETDKLDSEFDFLQAHDLHDDRSLNTPPPSKVQQNFEINPANSVLFNTDLALEDTLLFDNEPPSDMYVVRTENIFGKEIAKRNALEQLAADAGICSCSECKCDPSGGECRNCGHESERKCTEDKCSCVDCKCDHATMKCAIGCGLATDTNHNTFLHYHRRHNNSSLEELGVYTHDDDVPAKEIVDNLACSCQSKDKKCCVDISKASCPEESDACCGKDSSKSCCVTICFKKLDAFKQFLSDNDLLNALKAHNLNVTSSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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