Basic Information

Insect: Sesia bembeciformis
Gene Symbol: -
Assembly: GCA_943735985.1
Location: CALSEZ010000906.1:395392-407976[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0024 0.17 12.8 0.4 1 23 244 266 244 266 0.99

2 11 0.026 1.8 9.5 0.9 3 23 275 295 274 295 0.98

3 11 0.11 7.9 7.5 2.8 1 23 299 321 299 321 0.86

4 11 0.16 11 7.1 3.7 1 23 328 350 328 350 0.98

5 11 0.00024 0.016 16.0 1.9 1 23 356 378 356 378 0.96

6 11 8.2e-06 0.00057 20.6 1.3 2 23 385 407 384 407 0.96

7 11 0.00039 0.027 15.3 0.8 1 21 412 432 412 437 0.93

8 11 0.0085 0.59 11.1 1.6 1 23 445 468 445 468 0.97

9 11 0.0022 0.15 13.0 3.4 1 23 474 497 474 497 0.96

10 11 1.5e-05 0.0011 19.7 5.1 3 23 507 527 506 527 0.98

11 11 0.048 3.3 8.7 0.0 6 23 537 555 535 555 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0024	0.17	12.8	0.4	1	23	244	266	244	266	0.99
2	11	0.026	1.8	9.5	0.9	3	23	275	295	274	295	0.98
3	11	0.11	7.9	7.5	2.8	1	23	299	321	299	321	0.86
4	11	0.16	11	7.1	3.7	1	23	328	350	328	350	0.98
5	11	0.00024	0.016	16.0	1.9	1	23	356	378	356	378	0.96
6	11	8.2e-06	0.00057	20.6	1.3	2	23	385	407	384	407	0.96
7	11	0.00039	0.027	15.3	0.8	1	21	412	432	412	437	0.93
8	11	0.0085	0.59	11.1	1.6	1	23	445	468	445	468	0.97
9	11	0.0022	0.15	13.0	3.4	1	23	474	497	474	497	0.96
10	11	1.5e-05	0.0011	19.7	5.1	3	23	507	527	506	527	0.98
11	11	0.048	3.3	8.7	0.0	6	23	537	555	535	555	0.92

Sequence Information

Coding Sequence: ATGACTGAATACATCAATATTAACATAACAAACGTAAAGAACACTTGTCGAGCTTGCCTTAAAATCGGCGATAATGTATATACAATGACGCCCGATGAAGTAAATTTATATCAAAACATGATTATGAAGGTACAAACCACACATTTGAATATGTCCATCTGTGTATATTGTGGGCATCTCCTCAAAAAGCTTTCTAAGTTCATCAGTCAGTGTCAAAAAGCTAGTGACGTCATTGGCCAAGTATTTGAAGAGGAATCAAAATTCATATATATCCCCCATTTTACAATTGCCCAAAAAATACAAAAGTCAGATCTCAAAATACACTATTTAGGTCCTAAACAAGATTTAGAGCTACTAGATTTAAAGGAAAATAATTTTGATTTCTTCGACAATGCCGAAATTTTTTATAGTGATGATGAGGTGCCTTTAGTGTTTTTGGGGAGAAATGAGAGGAATCTAGAAGAAAAAGGAAGACGTAGGAAGAAAAGGAAAAAAGTGGAAAATAATGATTTGCATAACACTACAGAAAATATAAAGTCAGAAGACATAAAGCAAGAAAACAGGACACAAACACAACAAAAGACAAACAAACATAAAGTGTTACGGGATGGATTCAGCTCGCGAATGGTGCAGGAAACTGAGGAATATACAGTTATCAAGTTAAGTAAAGAACAAGTGTTGCAAGAAATGCAAGAAAAATCCAAAAGCGAGAAATACCGAAGGGCTCCTTATAAATGCGAGAAATGTGTGATAGGATTCAATTTTGAAGACGTACTCAGGACGCATATGGAGAAGCATTCTTTGGAACGCGGTTCATTATTATGTGATATCTGCACACAGTACTGTCCTAGCAACGTTTCGTTGAGAGGACACATCAAGTCGCACACAACCAGATATAAATGCAAAGTGTGCGGCGAGGTGCGTCTCTCCCGGCAACACCTGTTGGAGCATCACTCTATGCACATCGGTGCAGCCGCCGCTTATTCCTGCGACCACTGCAGCTTCACCACTAACAAACGCACAGTAATCCAGCGACATGTACGATCTCATAACAAACGTGAGAGACACGCGTGCGAGAAATGTGGCAAACTGTTCAAGAATATGGAAACATTGAGGGTACATACACTCCGTCACGACGCATCGAAACGCCTTCAGTGTGAGCACTGTACAAGAAAGTTCATCTACCCTTCATTGTTAAATAAACACATACAATCTGTGCACGTGCATAAGGACTATTATTGCGTTGAATGCGACGTTAGATTCAAATCCCCGGAAAACTTGAGGCTTCATTTTAAAAATGCCAAGAAACATCGCGACGCTTCGTCTTACAAGCACCAATGCCCACAGTGCATACAAAAATTCATAACGACATCTACCCTCTCAGTTCATTTGTCAACTACCCACGGCGCACCGAAACAGCATATGTGCGTTTTATGTCGCCGACGTTACAGTAACAGGGAGGCGCTGAGGTCACATACGAGACGCACACACGGCGAGAAGAGTGTGTCGCAAGAGATGTGTCATATATGTGAGAAGAGATTTGCTCATAAAAGTGTTTTAACAAAACACCTCCGCACGCATACGGGTGAACGCCCGTATGCGTGTTCGTGTGGAGCCGCCTTCGCTCAACCCGCAACTCTACGTGCTCATCAAGCCGCCAAACACAAGAAACAGGAGGACCAACTGATTTTATCCAATGAAATAGCAAACGTACCACGTGAAGCCTAG
Protein Sequence: MTEYININITNVKNTCRACLKIGDNVYTMTPDEVNLYQNMIMKVQTTHLNMSICVYCGHLLKKLSKFISQCQKASDVIGQVFEEESKFIYIPHFTIAQKIQKSDLKIHYLGPKQDLELLDLKENNFDFFDNAEIFYSDDEVPLVFLGRNERNLEEKGRRRKKRKKVENNDLHNTTENIKSEDIKQENRTQTQQKTNKHKVLRDGFSSRMVQETEEYTVIKLSKEQVLQEMQEKSKSEKYRRAPYKCEKCVIGFNFEDVLRTHMEKHSLERGSLLCDICTQYCPSNVSLRGHIKSHTTRYKCKVCGEVRLSRQHLLEHHSMHIGAAAAYSCDHCSFTTNKRTVIQRHVRSHNKRERHACEKCGKLFKNMETLRVHTLRHDASKRLQCEHCTRKFIYPSLLNKHIQSVHVHKDYYCVECDVRFKSPENLRLHFKNAKKHRDASSYKHQCPQCIQKFITTSTLSVHLSTTHGAPKQHMCVLCRRRYSNREALRSHTRRTHGEKSVSQEMCHICEKRFAHKSVLTKHLRTHTGERPYACSCGAAFAQPATLRAHQAAKHKKQEDQLILSNEIANVPREA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -