Basic Information

Insect: Sesia bembeciformis
Gene Symbol: Ctcfl
Assembly: GCA_943735985.1
Location: CALSEZ010000711.1:107782-136276[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.092 6.3 7.8 8.3 1 23 311 333 311 333 0.97

2 11 9.8e-05 0.0067 17.2 0.9 1 23 339 361 339 361 0.98

3 11 0.00037 0.026 15.4 1.6 1 23 367 390 367 390 0.95

4 11 0.039 2.6 9.0 3.3 1 21 396 416 396 418 0.95

5 11 0.00014 0.0094 16.7 2.7 1 23 424 446 424 446 0.99

6 11 2.7e-05 0.0018 19.0 5.1 1 23 452 474 452 474 0.99

7 11 0.00037 0.025 15.4 2.6 1 23 482 505 482 505 0.98

8 11 0.015 1.1 10.3 5.0 2 23 512 533 511 533 0.96

9 11 0.00018 0.012 16.4 1.9 1 23 539 561 539 561 0.98

10 11 4.1e-06 0.00028 21.5 1.9 1 23 567 590 567 590 0.96

11 11 1.8e-05 0.0013 19.5 4.7 1 23 604 626 604 626 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.092	6.3	7.8	8.3	1	23	311	333	311	333	0.97
2	11	9.8e-05	0.0067	17.2	0.9	1	23	339	361	339	361	0.98
3	11	0.00037	0.026	15.4	1.6	1	23	367	390	367	390	0.95
4	11	0.039	2.6	9.0	3.3	1	21	396	416	396	418	0.95
5	11	0.00014	0.0094	16.7	2.7	1	23	424	446	424	446	0.99
6	11	2.7e-05	0.0018	19.0	5.1	1	23	452	474	452	474	0.99
7	11	0.00037	0.025	15.4	2.6	1	23	482	505	482	505	0.98
8	11	0.015	1.1	10.3	5.0	2	23	512	533	511	533	0.96
9	11	0.00018	0.012	16.4	1.9	1	23	539	561	539	561	0.98
10	11	4.1e-06	0.00028	21.5	1.9	1	23	567	590	567	590	0.96
11	11	1.8e-05	0.0013	19.5	4.7	1	23	604	626	604	626	0.97

Sequence Information

Coding Sequence: ATGAAACGGATAGTCGTTTGGCCGGATACCGGGATACCGGGTATTTGGCGAGCTACGAAGCCGGATATCCGGCGGCCGGATATGCGGCTCAATGTCTCGTTGCATGTTGTGACGAGTTTAGCGCCGCACAGGTGCAGCGAACGCGATCAGATCAATTCGGGCGGGCGAGCGCAGAAGGCGCTCAGCCAGGAACAAAATGTGTGTTGCAACGAACCTAAGGGCTCCCCCGCCGGTAAACCGGCGGAAGGAACGGACCTCGGCTTAGGGCGTTACATTGGGGGGATACCGCGGGATCGCGAGTCGGTGAGAAGCGTGAAGCGGCACGTGCCGATACCTGCCATGACCCCTCCACAGCCAAATAAGCAAGGCCTTGTGGAAATACAAACATATCTGGATATACCAGCCTTTCAATCCGACGAATCAGAAGCTCAAGGACAAATTATAGCAGTAAGAACTGGAGATGATGAAGCGGAAGACAATGTAACATATTTTGTGGACGAAGAAGGCCGTTACTACTATCATGCTACTGAAGGTGGCACACAAAACTTGGTCTCCATCAACGCAGTTGCTGATGAGAGTGGGACCTTATCTGAAGGTACGCAACAGATGTTGGTCGATGACGATGCCACCTTCCAGGCGGTCACACTACTTCCAGAGCCAAATACAGGCGAAGTGAGCTACGTATTGGTCGTTCAACAAGAGGACCAACAGGCTGACGATGATGGTGAAGAAGCTATAGAAACCAAACCGCAGATTATCGACATTAGTATAGAGAGGAAAATCGACGGTGAAGAAGACACGAAAAGAGAGGACGTATACAGGTTTGAAGAAGAGGATGAGCAATCTGATCAAGAAGAGGGGGGACGCAGCGAAGAAGAGGATCCACGGTTAAAGCCCAGGGTCACTCGCAATTCGAAGGGAGTACGCAGTTTCTGCTGTAATTTCTGCTCCTACACCAGCCACCGGCGATATCTACTCTTGCGACATATGAAGTCCCATTCGGACGACCGCCCGCACAAATGCGTGGTTTGCGAGCGCGGCTTCAAAACGCTTGCGTCCCTTCAGAATCACGTTAACATGCACAATGGAGTCAAACCACACATCTGCAAGTACTGTAGCAGTCCGTTCACAACATCAGGCGAATTGGTACGTCACGTACGTTATCGGCATACACATGAAAAGCCTCACAAGTGCACGGAGTGCGACTACGCATCAGTGGAACTATCAAAATTACGCAGACACGTCCGCTGTCACACCGGAGAGCGACCCTACCAGTGTCCTCATTGCACGTACGCGTCCCCGGACACGTTCAAGCTGAAGCGGCACCTGCGCACGCACACCGGCGAAAAGCCCTACAAGTGCGACAACTGCAACATGTGCTTCACGCAGTCCAACTCGCTCAAGTCGCACAAGCGCATACACAACGTGACGGACAAGCCGGTGTACAAATGCGAGCTGTGCCCCACCAAATGCGGTCGCAAGACGGACCTGCGCACGCACATACAAAAACTACACACATCCGACAAACCTCTCAAGTGCAAACGTTGTGGCAAGTCTTTCCCGGATAGATACTCCTGCAAAATGCACAACAAGACGCACGAAGGCGAGAAGTGTTTCAAATGCGAGCTGTGTCCGTATGCGTCGACTACATTGCGACACCTTAATTCGCACATGCTGAAGCACACGGACGAGAAGCCGTTTGTGTGCGACCAGTGTGACCAGTCCTTTAGACAAAAACAACTACTTCGCCGACACCAGAACCTCTACCATAATCCTGAATACGTGCCGAAGCCTCCTAAAGAGAAGACTCACACTTGCCACGAGTGCCGGCGCACGTTCGCGCACAAGGGCAACCTCATCCGGCACCTGGCCGTGCACGACCCGGACTCGGGCCACCACGAGCGCGCACTCGCGCTGAAGATCGGACGGCAGCGACGGCTCCAGTACGCGCACGACGAGCGCGACGCGCACGCAAATACGCCGAACACAGTGGAATTGGAGTCAGAAACAGAAATAGAGGAGACAGTAAACGTGAATATGAACGAATTGAATAGCGGTGAACTGGTGACGGTGGCGGACCGCGACGGGCAACAGTACGTGGTTCTCGAGGTGATCCACCTGGAGGACGGCGGTGAACAACAAGTCACTGTCGTCATGCCCGAGTTCATGCACGACGGAACCATGGAGGCCGAGCTTTCGGAAGAAGAGGAAGAGGAGGCGATTAACGATATGGAGGAGGAAATAGAGGAGGAGGAAGAAGAGGAGAAGCCGCACGTGGAGATGGAACACGCGCGCCAGAAGGCGATAGACAGGAGCATCAAGGTCGAAAAGGAGGTCGGCAACTGCTTCGGATTCGCCGATGAAGAAGAGGTAGAAGAGGGTGAACATGCTTATGACGAGAGGATCGTTGTAAACATCTCGTAA
Protein Sequence: MKRIVVWPDTGIPGIWRATKPDIRRPDMRLNVSLHVVTSLAPHRCSERDQINSGGRAQKALSQEQNVCCNEPKGSPAGKPAEGTDLGLGRYIGGIPRDRESVRSVKRHVPIPAMTPPQPNKQGLVEIQTYLDIPAFQSDESEAQGQIIAVRTGDDEAEDNVTYFVDEEGRYYYHATEGGTQNLVSINAVADESGTLSEGTQQMLVDDDATFQAVTLLPEPNTGEVSYVLVVQQEDQQADDDGEEAIETKPQIIDISIERKIDGEEDTKREDVYRFEEEDEQSDQEEGGRSEEEDPRLKPRVTRNSKGVRSFCCNFCSYTSHRRYLLLRHMKSHSDDRPHKCVVCERGFKTLASLQNHVNMHNGVKPHICKYCSSPFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLRRHVRCHTGERPYQCPHCTYASPDTFKLKRHLRTHTGEKPYKCDNCNMCFTQSNSLKSHKRIHNVTDKPVYKCELCPTKCGRKTDLRTHIQKLHTSDKPLKCKRCGKSFPDRYSCKMHNKTHEGEKCFKCELCPYASTTLRHLNSHMLKHTDEKPFVCDQCDQSFRQKQLLRRHQNLYHNPEYVPKPPKEKTHTCHECRRTFAHKGNLIRHLAVHDPDSGHHERALALKIGRQRRLQYAHDERDAHANTPNTVELESETEIEETVNVNMNELNSGELVTVADRDGQQYVVLEVIHLEDGGEQQVTVVMPEFMHDGTMEAELSEEEEEEAINDMEEEIEEEEEEEKPHVEMEHARQKAIDRSIKVEKEVGNCFGFADEEEVEEGEHAYDERIVVNIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -