Basic Information

Insect: Sesia bembeciformis
Gene Symbol: -
Assembly: GCA_943735985.1
Location: CALSEZ010000022.1:589157-590731[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.04 2.8 9.0 1.9 2 23 213 235 212 235 0.92

2 10 0.00069 0.047 14.5 0.3 1 23 241 263 241 263 0.98

3 10 0.00046 0.032 15.1 0.8 1 23 269 292 269 292 0.97

4 10 0.00077 0.053 14.4 0.2 3 20 300 317 298 319 0.95

5 10 0.0041 0.28 12.1 5.8 1 23 336 358 336 358 0.99

6 10 4.7e-06 0.00033 21.3 1.1 1 23 365 387 365 387 0.98

7 10 4.3e-05 0.003 18.3 1.3 1 20 393 412 393 415 0.95

8 10 1.7e-06 0.00012 22.7 2.5 1 23 421 443 421 443 0.98

9 10 1.8e-05 0.0012 19.5 1.6 1 23 449 471 449 471 0.98

10 10 0.0014 0.097 13.6 5.1 1 23 477 500 477 500 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.04	2.8	9.0	1.9	2	23	213	235	212	235	0.92
2	10	0.00069	0.047	14.5	0.3	1	23	241	263	241	263	0.98
3	10	0.00046	0.032	15.1	0.8	1	23	269	292	269	292	0.97
4	10	0.00077	0.053	14.4	0.2	3	20	300	317	298	319	0.95
5	10	0.0041	0.28	12.1	5.8	1	23	336	358	336	358	0.99
6	10	4.7e-06	0.00033	21.3	1.1	1	23	365	387	365	387	0.98
7	10	4.3e-05	0.003	18.3	1.3	1	20	393	412	393	415	0.95
8	10	1.7e-06	0.00012	22.7	2.5	1	23	421	443	421	443	0.98
9	10	1.8e-05	0.0012	19.5	1.6	1	23	449	471	449	471	0.98
10	10	0.0014	0.097	13.6	5.1	1	23	477	500	477	500	0.96

Sequence Information

Coding Sequence: ATGTCGGAACAAGTAGAAATATATTGCCGTCTTTGCGCCGAAATTAAACCGACTCTACAGCTCTTATCGCCTAGCGACGATGTCGCTATCAACGCTGATATTACCACGAAAATGATGTGGATCAACGTCCATGTTTCTGATTCTAATTTACCTAGTTCAATTTGCTTCTCTTGTTTCGACTTATTGGAGAAAACATGGGTGTTTTTACATCAGGTACGTAATGCGCAAGTGAAATTACTTTCCTTGTGGAAAAAAACTGACGATGGTAGCAGTATCTTCGAGCTCACGGACGCGGGGAAACCAATGGATGTAAATTGGGAAGAATTTCAGCGGATAAAAGGAGAAAAACACGGGTCTTCCACTAAAATGGAGGGTAGTAAAGTATTAACATACTCACATATAAAAACAGAACAAAACAGTGACAATGATTTACTAACGACAACACAAAAAGACAATTCATATTCATCTGAACACTCAACCACAGACTCGTCTACTGACAGTGAGTCTGAAATAGAACAGAGAATAGTTGTGAATAGGAGAAAGATTTTATATAAGAGGAAATTGCACCTTGACAAGCTTAAAGACAAGCCAATAAATGTGTCTTCATTGAATATATCATGGGACAATTGCATGTGTCAATGTGCGAGTTGCAATCAACAATTTAAAAATATTGCATCTCTACAACAACATTCTATAAAAATGCATCTAAGCTGTTGCACATTCAAATGTTTAGACTGTACCAAAGTATTCTCTGGGTTCATTCAGTTTGTAGTGCATGCAAGAGTGCATAAGAAACTGCTCAAGTACAGCTGTGAATACTGCAATAAGCAGTACTCCACAGTAGCACTTGTAAAACAACATCAATCTAGAATCCACAAGAATGTTCTTCGTACTATTTGTAAGAACTGCGGGTCAAGATTTAAGACACAACAGTTGCTACAGGACCACATGGGACTATATGGGAATGATTACAAGAACAGAACCGAGGAATTAAAAAGACTTAATTACAAATGTGAGAGCTGTTGCAAGGAATTTCGATCAAGCCATGCATTGGAGCGGCATAGGAAAGTCCATACGGAGCGCAGTCGAGATTTTGTGTGTCATTTGTGTGGGAAAATGTTTTATTCCAAAAGAGATTTGAGCGGCCACATGATTATACACACAGATCTCAAGCCTTATAAATGTGAGATATGTCCTAGAGCATTTAGAGTTAAGGCAAATCTCCGATCGCATGTTACTTGCCATACTGGAGCGAAGCCTTTTGTTTGCAAGCAATGTGGAAGAACTTTCCGCACAAATACCCAGTTAAAATCTCACTCATTAACACATACGGATTTAAAGCCTTACATTTGCAAAGATTGCAGCAAGTCATTTCGATTAAAACAAACATTATTGGTGCATTTAAGGCAACACACTGGGGTCAAACCCTATCACTGTGAATATTGTCAGAGGGATTTCACAAATGACTCCAATTTTATTAAACATAATAAACGAAAGCATAACAATGTTAAGATTGATATTAATACAGCAACTAAGTCTATGGTAGAAGATAAATACAAAAGGAGGTTGGAGTAA
Protein Sequence: MSEQVEIYCRLCAEIKPTLQLLSPSDDVAINADITTKMMWINVHVSDSNLPSSICFSCFDLLEKTWVFLHQVRNAQVKLLSLWKKTDDGSSIFELTDAGKPMDVNWEEFQRIKGEKHGSSTKMEGSKVLTYSHIKTEQNSDNDLLTTTQKDNSYSSEHSTTDSSTDSESEIEQRIVVNRRKILYKRKLHLDKLKDKPINVSSLNISWDNCMCQCASCNQQFKNIASLQQHSIKMHLSCCTFKCLDCTKVFSGFIQFVVHARVHKKLLKYSCEYCNKQYSTVALVKQHQSRIHKNVLRTICKNCGSRFKTQQLLQDHMGLYGNDYKNRTEELKRLNYKCESCCKEFRSSHALERHRKVHTERSRDFVCHLCGKMFYSKRDLSGHMIIHTDLKPYKCEICPRAFRVKANLRSHVTCHTGAKPFVCKQCGRTFRTNTQLKSHSLTHTDLKPYICKDCSKSFRLKQTLLVHLRQHTGVKPYHCEYCQRDFTNDSNFIKHNKRKHNNVKIDINTATKSMVEDKYKRRLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -