Sbem007885.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sesia bembeciformis
Gene Symbol
-
Assembly
GCA_943735985.1
Location
CALSEZ010000270.1:280549-301380[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.00074 0.051 14.4 2.1 1 23 194 216 194 216 0.97
2 28 0.0004 0.028 15.3 1.2 2 21 248 267 247 268 0.92
3 28 1.2e-06 8.6e-05 23.2 0.3 1 23 293 316 293 316 0.96
4 28 1.9 1.3e+02 3.7 0.4 3 21 336 354 335 355 0.87
5 28 0.011 0.76 10.7 0.6 2 23 366 388 365 388 0.96
6 28 0.00073 0.05 14.4 0.8 1 23 403 425 403 425 0.98
7 28 0.069 4.7 8.2 2.3 2 23 465 486 464 486 0.95
8 28 0.00039 0.027 15.3 2.3 2 23 525 547 525 547 0.97
9 28 0.28 19 6.3 2.8 1 23 597 620 597 620 0.95
10 28 0.0011 0.077 13.9 0.3 1 23 680 702 680 702 0.97
11 28 0.0012 0.081 13.8 4.2 2 23 714 735 713 735 0.96
12 28 0.032 2.2 9.3 1.7 2 23 747 768 746 768 0.96
13 28 0.0066 0.45 11.5 0.6 1 23 778 800 778 800 0.98
14 28 0.0026 0.18 12.7 7.0 1 23 828 850 828 850 0.96
15 28 0.0023 0.16 12.9 4.8 1 23 861 883 861 883 0.98
16 28 0.00016 0.011 16.5 0.3 1 23 891 913 891 913 0.97
17 28 0.017 1.1 10.2 0.4 2 23 933 955 932 955 0.96
18 28 1.5 1e+02 4.1 1.2 1 23 973 995 973 995 0.91
19 28 0.78 54 4.9 0.6 2 23 1035 1057 1034 1057 0.94
20 28 0.00071 0.049 14.5 0.3 1 23 1079 1101 1079 1101 0.97
21 28 4.8 3.3e+02 2.4 0.3 2 20 1105 1123 1104 1124 0.91
22 28 0.0077 0.53 11.2 1.8 1 23 1181 1203 1181 1203 0.96
23 28 7.3 5e+02 1.9 5.1 5 23 1213 1231 1211 1231 0.94
24 28 0.014 0.97 10.4 0.9 2 23 1242 1264 1241 1264 0.95
25 28 1.6 1.1e+02 3.9 3.7 2 23 1281 1299 1281 1299 0.90
26 28 0.37 25 6.0 1.3 2 21 1303 1322 1303 1323 0.93
27 28 0.037 2.5 9.1 0.5 2 23 1371 1392 1370 1392 0.95
28 28 0.015 1 10.3 1.0 2 23 1403 1425 1402 1425 0.96

Sequence Information

Coding Sequence
ATGGCCCTCAAACTGGGAAAATGCAGACTTTGTCTGAAATTGGGAGACTTTTACTCCATCTTCACTGTAGACAATGCCATTCAGCTCTCCGAAATGGTCATGGAATGCACTCGAATAAAAGTCTACGATGGAGATGGCCTGCCTGACAAGATTTGCTCAGAGTGTATCCAAAAATTGAGCAGCGCTTACATATTTAAACAGCAATGTGAGAGATCTGATTTGGAGTTACGAAGAAATTATGTGCCACCTGCAGGTTTCACTCCGCCACCGCCGACCAGACAAAGCAGTGATTCCGCCTTCTCAAATCATACCGATACTTCTTTCCAAAACAAACCTTCTTCATCTACCGAGGGCAAACTGACTCCAGCCAATCGGAGTCGGAAGCGCAGTCATGAAAGCATAGACAACGCCTCAACGAGCAGCCATTCGCGCGATTTCAGACCAAGCAGTTCTAGACAAATCAAGGAGCCTAAAAAGAATGATGAGCCGAAGTACCAGTATGATTCTGACTATGATGACAACAGCGCGTCAATGTTCTCGGCAGACACAGACTCCGATGATCCAAAGACTAAGGAGGAATTTGCCTGCAAAATATGCAATAAAGCATTCCACGCCAAAAATAGTTTGACCCAACATGTCAAATCGCATTCCCGCAAAGGCGCTTTGAAATTAGGAGAAAATGCTGTAGTCAACATCCCAAAGAAAAGCATAGAAGACGCTAAGGATGTAGAAGACAAGTTGTCCTGTGAAAAATGTGGAAAATCGTTCAAACTTAAAATCATGTTGAAACGGCATCATGAAACATGTGAGAACTCACTAAAGACCCATAAGGAGTTGTTGGTGTCACTAGAACCGGTGGATGCAGTGCTTAGCAAATTTGAATGTAATATATGCTCTGAAAACTTTAAAACTTCCGAGAATTTGCAGGTCCATATGAGAGGTATTCACTACATTAAAAATGAGAGAATGGAGAAGGCCGAAAATACGCAAAAAATTACGGTACCTTGCATCTATTGTCATAGACCGTTTGACGATTACTATCTATACACTTCGCACTTTAACTCGTGTTCGAAACGGTCAGATAACATTGAGTTAGAATGTCCGTTGTGTCAAAGGGTGTTGACAAAGAGGAACACATATTTCACCCACATACGGAATGTTCATTTTGAGCGGGTAAACAAACCTAAGGAAAGTGCCAAGAAAGAATTCGAGTGTCGTATGTGCAGTAAGAAGTTGTCAAGTCAGAACCTACTCATAAAGCATCTTGCTACGCACATGTCTAATATAGAGGGCGACGAAGAGGAATCTAGGATAAGTTCCATAGAGGATTCTGCCTCAATACCAGAATCGGAACACACTCCAAACACATCTCTGACATCAGGTCAACCTTTGAAATGCGCCTACTGCGGGAAACAATTCAAAATTATGAAGTGTCTGGTTACACATGAGCTAAAACATGCATCCGGTGAGATATCGGTCAAATCCGAACCGCCAGATAAAAACCAGTCTAGTCTTCTGAAGGAAGCATACCGAGAGGAGTCCGAATCTAGTCAGGATGAAGGGGATGATAATACATGTGATATATGCGAGAAACAGTTCTCGTACAAGCGACTGCTTCTACAACACAAGCGCACGAAGCACAATATGAGCTCTGGTCACAAGCGTGCTAAAATCAATCTAAAAGACTGTGAAGTGCGCTGTCTCATATGTGATATTGATATGAAAGTGAGTGACATCAGTGAGCACAATCAAACACACATATCGGCCAACATAAAGCCTAGAAATCTATATACTTGTATAGAATGCAATGTGAAATTCCAGAGCTGTCATTCCCTAGCTAACCACATAAAATTGGTTCATAGATTGAAACAAACAAATACTAAAGTGAGCCAGGATGACTATGAAGCCCCTGATTTGGCGGATTTTTGTGAGGTCGTTGTGACAAAGGCGGAACCCTTGGACGAAGTCCAGAGTCACAACGACAAGGGCAAAGTTCCGTCTAAAATCAAAAGCACCCCATTAGTGGACTTGAACGGGTTCACTTGTCCTTTGTGTGGCAAGAAGATGAATACGTTGATTTCCCTGAAACGCCATGTGAACTGGCATTCTAATGTTGGGAATAATATAGAACAGAAAATGGAGTGTTTCGTCTGCAAGGAGAAGTTCAGATTCAAGAGTCATTACCGTCTTCACATGCGCGAACACTACACAGATACCAACCTCGACCCCGCCCTACTCACATGCACAATCTGCAACCGACGCAGCAAGCATCTACGCGCCGCACAAGCTCACATGAACTACCACAAACAAACACGCTTCAAGAACAAAGACTACGAATGCTCTATATGCAAAAGAGTGTTCCAGTACAGACGAGTGTATCTCTCACACATGGCGATACACTTCAAGCGAGGCGAGAGCGTCCAGAACACTATAGTAGGCGACTGCACCCCGAACACGAAAGATAAACAGATAGACGGAACACACACTTGCCACCTATGTGGCAAAGTCTGCGACTCGGCATCCTCTCTAAAACATCACACCTCGTGGCATAATTCCAAGACAATGTTATACGGAGCACGGCACGAGTGCACCTTCTGTCATCTCGTATTTACCAATAAAAGAAGTCAGGAGATACACATCAGAACACATTTCGAGGACGATAACGGACCTTTCAAGTGTCAGGTATGCGGCAAGGGATATATCGACGAGGGATATTTCAATAGGCATGTGAAGGGACACAACTTCGACCACCAATCTCACAAGAAGCGAATAGAGAAGTTGAGAAAAGACAAAGTCAAGTGTCCGATTTGTGCCCGCTTCTATCCCGACTTAGTGCGACTAATACGTCACTTGCGACACACGCATCCACAGAGTAAAATGATTAAAGAGGACCCGGACGCGCCTCCTCAACCTTACTTCTCGTGTAAACTGTGTGCCAAAGTATTCCTTGATGAGAGAAGACTCAAACATCATGAGGAAGCTCATACACGCAAGCATGAGTTTTTCAAATGCAAATTCTGCTTAAAAAACTCTTCATCCTTGAAGCACCACAATATTCACATAAAGTCTCACTTAGTTCGAAAGTATATCGACGACCCTCTCCAGTGTCCACAGTGCGAGGAGAAATTGTACAAAGGGTATGATTTGCACTACCACTTGCGCGATATTCACGGCATTACTGAGACTTGGATAGCTGACGACACCAAGCCGACTTTAAATGGTCCGCTACAGGAATTCCAGTGTTCAATATGCCTTAAAGTTTTAGCCAGTAAAGGCAACTACGAGAGGCATATAGACTACCATAATACACTACGTTGCAATTACTGTTTCGATTACTTTAGCTCTCCCAGATTTTTAGAAGGCCATCAAGCATTTAGCTGTGAAAAGAGGAAGCTTATTGGAGATACTGAAATACATCTGAGGAAGATTAAGTGTCATATTTGTTACAAGGCGTTCCATGTACAAGTGAAATTGGACTGTCATTTGCACGCACAGCATAATATCAAAGTTTCGCGAGAGGTCATTGAAGGAAAGAAAGAATTTGTATGTGACTACTGCTTCAGAGTGTTTGAAAATGAAGAGTGTCTCATCTCACATAAAATATATCACCGTACAGTCGGATATTTTGGGTGCATTTACTGCAAGAGAAAATTCAACACGATCACACTCTACAGAAAACATAAAAACCATCACTTTGCTCAGCTTAACGTAGACAACCCGACAAAGTGCGAACATTGCGACGAAACTTTTGTTGCATTTAGAGACATGATATATCACATGAGAGATGACCACGGGGACGACAAAGAGTGGCTGGTGATGCCCAAGGAATCAATCGAGGAAACATGCAAGATATGCAATAAAACATTCCTAAATCTGCACAGACATCTGGAGTACCATGAGGAAAATAGATGTAAGAAATGCGGCGAATACTTCTTCTCAAGAGTGGACTATGACAATCATCTCTGCGCCATTGAAAGCGACGATGAAGTGGAAAATTTGGAGTTGACCACTAAACCGCCCTATGAGGAGTGTCGCTTCTGCTTCAAGCCCATCACCAAAAAGGATTCTAAACTGAAACACGATAAAATACATAGAGGTTCTGGTGCTATATCATGTCGCTTTTGTCCGCTCAAGTTTAAAACTTTAGACGCGTTCAACATTCACGCGTTTACCCACCGCAGTCGCAAGTACAATAAGAAACCACTAAAGTGTCGCAAGTGTGACGAGAAGTTCGTCAAATACGGGCCGTTCATGAAACATTTGAAATCAGTCCATAAATCAGTGCAGAAGATGCACTACCGCTCGATCGTGAAAGCTGAACGATGCATCGTGTGTGGTGATGATTTTCCCAACCTCCATAACCATTACCGTGCTCATTTACAAAACCGGTGTCAGTCGTGTCGCAAGTATTTCACGTCGTTGAAGGTGTTCAATTTCCACGAGTGTGATAAAGAGGATTTAGATCCATCGAAAGTGTTCGTATGCGACGAAGACTTGCAGACGTTAATAAAAACCTATGTTCCTAAAGATGAAGAGGAAGATGATCAGAAGTTTTACGGATATGATGATAATGAAAGGACATTAGATTTAAATGATGATGCCAGCCAAAACTCAGCAGAAAGCGAGCCATTGATGGCGTTTGAAAGGCCTATCATATCTGGAGTGCAATCGCTCTACGAAAAAGAGATAGAAAAGTTGAGCACCGATGACAGTCAAGATGCTGGAGAAAAACAAGATGACCACAACGGTGACGTCATAGATTTGATAGACGATGACTCTGTAGACGTTGACTGTACTCCCATTCAGGCTGTGTGGACGTGGGTGCTCATTGTGACCATTCGCCGCATACGCACGTTGCGAGCAGATTCTACTAATTCGTGCGATGCGAGCGGTGTGGTTGTTTGCGTGCTCACCCTGAGCATGTGCCGTTCGTACGGATACATTTTTGTACGTCACATGCCACATGCCTCAGGCTGA
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTVDNAIQLSEMVMECTRIKVYDGDGLPDKICSECIQKLSSAYIFKQQCERSDLELRRNYVPPAGFTPPPPTRQSSDSAFSNHTDTSFQNKPSSSTEGKLTPANRSRKRSHESIDNASTSSHSRDFRPSSSRQIKEPKKNDEPKYQYDSDYDDNSASMFSADTDSDDPKTKEEFACKICNKAFHAKNSLTQHVKSHSRKGALKLGENAVVNIPKKSIEDAKDVEDKLSCEKCGKSFKLKIMLKRHHETCENSLKTHKELLVSLEPVDAVLSKFECNICSENFKTSENLQVHMRGIHYIKNERMEKAENTQKITVPCIYCHRPFDDYYLYTSHFNSCSKRSDNIELECPLCQRVLTKRNTYFTHIRNVHFERVNKPKESAKKEFECRMCSKKLSSQNLLIKHLATHMSNIEGDEEESRISSIEDSASIPESEHTPNTSLTSGQPLKCAYCGKQFKIMKCLVTHELKHASGEISVKSEPPDKNQSSLLKEAYREESESSQDEGDDNTCDICEKQFSYKRLLLQHKRTKHNMSSGHKRAKINLKDCEVRCLICDIDMKVSDISEHNQTHISANIKPRNLYTCIECNVKFQSCHSLANHIKLVHRLKQTNTKVSQDDYEAPDLADFCEVVVTKAEPLDEVQSHNDKGKVPSKIKSTPLVDLNGFTCPLCGKKMNTLISLKRHVNWHSNVGNNIEQKMECFVCKEKFRFKSHYRLHMREHYTDTNLDPALLTCTICNRRSKHLRAAQAHMNYHKQTRFKNKDYECSICKRVFQYRRVYLSHMAIHFKRGESVQNTIVGDCTPNTKDKQIDGTHTCHLCGKVCDSASSLKHHTSWHNSKTMLYGARHECTFCHLVFTNKRSQEIHIRTHFEDDNGPFKCQVCGKGYIDEGYFNRHVKGHNFDHQSHKKRIEKLRKDKVKCPICARFYPDLVRLIRHLRHTHPQSKMIKEDPDAPPQPYFSCKLCAKVFLDERRLKHHEEAHTRKHEFFKCKFCLKNSSSLKHHNIHIKSHLVRKYIDDPLQCPQCEEKLYKGYDLHYHLRDIHGITETWIADDTKPTLNGPLQEFQCSICLKVLASKGNYERHIDYHNTLRCNYCFDYFSSPRFLEGHQAFSCEKRKLIGDTEIHLRKIKCHICYKAFHVQVKLDCHLHAQHNIKVSREVIEGKKEFVCDYCFRVFENEECLISHKIYHRTVGYFGCIYCKRKFNTITLYRKHKNHHFAQLNVDNPTKCEHCDETFVAFRDMIYHMRDDHGDDKEWLVMPKESIEETCKICNKTFLNLHRHLEYHEENRCKKCGEYFFSRVDYDNHLCAIESDDEVENLELTTKPPYEECRFCFKPITKKDSKLKHDKIHRGSGAISCRFCPLKFKTLDAFNIHAFTHRSRKYNKKPLKCRKCDEKFVKYGPFMKHLKSVHKSVQKMHYRSIVKAERCIVCGDDFPNLHNHYRAHLQNRCQSCRKYFTSLKVFNFHECDKEDLDPSKVFVCDEDLQTLIKTYVPKDEEEDDQKFYGYDDNERTLDLNDDASQNSAESEPLMAFERPIISGVQSLYEKEIEKLSTDDSQDAGEKQDDHNGDVIDLIDDDSVDVDCTPIQAVWTWVLIVTIRRIRTLRADSTNSCDASGVVVCVLTLSMCRSYGYIFVRHMPHASG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-