Basic Information

Gene Symbol
ZNF296
Assembly
GCA_943735985.1
Location
CALSEZ010000501.1:137457-155621[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.051 3.5 8.7 0.0 1 23 112 134 112 134 0.97
2 17 0.0017 0.11 13.3 2.5 1 23 236 258 236 258 0.99
3 17 1.1e-05 0.00077 20.2 0.9 1 23 264 287 264 287 0.97
4 17 0.0074 0.51 11.3 6.0 1 23 292 315 292 315 0.93
5 17 0.00011 0.0074 17.1 0.8 2 23 488 509 487 509 0.97
6 17 1.5e-05 0.001 19.7 1.1 1 23 515 537 515 537 0.99
7 17 0.00044 0.03 15.2 0.4 2 23 602 623 601 623 0.97
8 17 6.6e-06 0.00045 20.9 0.9 1 23 629 651 629 651 0.99
9 17 0.0031 0.22 12.5 6.3 1 23 713 735 713 735 0.98
10 17 0.32 22 6.1 0.9 2 23 743 764 742 764 0.96
11 17 0.00075 0.051 14.4 4.2 1 23 770 792 770 792 0.96
12 17 5.1e-05 0.0035 18.1 2.2 1 23 798 820 798 820 0.98
13 17 0.0095 0.65 10.9 4.1 1 23 829 851 829 851 0.98
14 17 0.00046 0.032 15.1 0.8 2 23 897 918 897 918 0.97
15 17 0.0022 0.15 13.0 2.7 1 23 935 957 935 957 0.96
16 17 1.8e-06 0.00012 22.7 0.7 1 23 963 985 963 985 0.98
17 17 1.2e-06 8.5e-05 23.2 3.0 1 23 991 1014 991 1014 0.98

Sequence Information

Coding Sequence
ATGGAAGTTGATCCAGTTGACCCACTGAGTACATATGATTTTTCATACACAATCTATGGAAATACACCACAACATAATATTTCATATACCACGAAACCCGAATCACAGGAATATGGAAGCGACATTAAGAATCCAACTGTGAACAATTTAAGTGATGCTCCGAACGACCATAATGGAGATGCAAATTTACCGAATACTGTTACAGAATCAAAAAACATATGCAATGGAAACTTAAATAATAAGAATTCAATTAAAAGGTCAACGAAAAGTAAGATAAAGAAAGAAAAAAGTAGTTATTGGTGTGAAAAGATAAGAGAAGAAGGATTTCCATTCTACGCATGTGCTATATGTAATGTAAACTTTCCATTGTTGCGAGAACTGGATAAACATGTTAATAGCCACAAAGGCAGACCGACAAGCTATGATTTGAGACAGAAAAGTAGATTGAGAAGGAAAATGCAGAAGAAAGAAAAGAAAAAGCTTAAAAAGCAGGGGAAGAAGATAAAATCTGAGTTAGACGTAGAAATAAAACCAGAAGATGGTTATATAGGAAATGAAAAAGCTTCTGAATATAATCCAGATAATTTGGCATATATTCCTAATGGTAATACCCCCGATGGGAAAATATCCAATGAAAGTGAGGGTAGAGAGCCCAAGAATGGTGGGATTCCCAAGGATTCCAATGAGTACAATTTGGAGAAAATTTACAAATGTTACGCTTGTCAGAAACAGTTTTCTTTGAGTTATTATTTGAAGTTACATGTTAGGTCACATACAGATGAGAAACCATATACATGCAGTATATGTGGCCTATCATTCATAACAGCGAGCCACCTCGGGAGACACAACAAAAGGATACATTTAGCCATTAGACACCAGTGCAGGATATGTTTCAAGAAGTTCTCTAGATTTGAATATTTGAAAAAACACTTTGACAAAGAACATTCAGATGATAAATTGGAAGGAGAACCGTACGATTACAACATTATACTTCCCTACTTAAAAGAGCTAGAAGAGGAGTTGCTCAAAGAAAAGGAAAATGAAAAGACCGAGCCCAAAGAGAAGACCGAGAAGCCCGATGAGATCCAGGTCGGAGACAAAAATGTTCATTGGATTGATACGGGAATAGAACCAAAAGACCGAGTCGAAGTGAAAGACTTTTCAATAGAACAGGTAGTTTCACACTTAGACATAATGATGGATGGCATCGAAGAACCAGCCATTGAAGTTAAAACTGAACAAGAATGGTTAGATGTTAAAGAGGAGGACGGAATAACAGTGGAGTTAGTCAAAGAGGAGTATGGGGACGGGGATGGAGGGGATGGCGGCGCCGACAACGCTTTTGACGATGTTAAAGATGAAGACTACTCAGATGAAGACTACTTCCCCTCGAACACGTGGACTACCGCCACTATCCCCGACTTACCCCCCGCTTACCCGCGGAGGTCGGACGGCACCCTGCAATGCGATATATGCAAAAAAAACATCAGCTCGCTCTCATACATGCGCATACACATGCGGACGCATACAGGGGAAAAGCCATTTAAATGCAGAATATGCGACAGAGGGTTCATTACCAGCAGCAAGATGAATAGGCACGTGCTGACACACCAGCCTGAGGACGAGAAACCAGAAGATAAGGAAGTGAAATCTGAAGGAGAAGGAGTTGAAAAGGACGGGGGACGCGATGGAAAGTCAGATAAAGGCTTTTCAGACGAAGATTACTTCCCCGCGAACACGTGGACGACCGCCACTATCCCCGACTTACCCCCCACTTACCCCCGGAAACCAGACGGGACTCTCCAATGTGAAATATGCGAAAAAACAATTAGCTCTGTTACATATATGCGAATTCATATGCGAACGCATACGGGAGAAAAGCCTTTCAAATGCAGAATATGCGGCAGAGGGTTTATTACGAGTAGCAAAATGAATAGGCACGTGCTGACCCACCAGACGGACGATGACAAAGATATAAAGACTGAAGAGACGGAAGTGAAATCCGAAGGGGATGGAACGGAAAAAGATGAGGATAGGGATAAGAAAGCCGGGAAACGCACGAAAAAGAAAAAAACGAAATTCACAAAGAAAGCCAAAGAGGGCGTGAAACAGAAGAAACCGTATCAGAAAAGGCCGTACTCTTGCGATCATTGCAAGAAGAAGTTCCTTCACAAAGACACTTTGGAAGTCCACAGACAAACGCACGAGGGCCAAGAGAAAGTGTTGAAATGTCAGTTTTGTTTGGAAATTTGCGAAAACGAGGGTAGTCTGAAAACACACGAGGCAACACACGAAGGGCCAAAACCTTATTTGTGCACACAATGTGGGAAAACTTATAAGAGAAGGGATAGTATGATATACCACCGGCACACACATAAACCCGACCGTCTGTTCCAATGCGAGGTGTGCACGAAGACGTTCAACGCGCCGTGCAAGTTGCAGCGGCACATAATGTCGCACCGCAGCGCGCGCTACACGCTGCGCTACGAGTGCCCCGTGTGCGCGCACATGTTCCACACGAAGTACCACGTGCAGATGCACCTCGCCACACACCAGAAGGAGGGCCTAATTCTAGAAGAAAATCGCAACGATATACTCGCGATGGTCCTGCAAAACGCCCGAAAAATCCCGAAACAAACGGACGGGATCATTCCATCCATTCCCCCTCCGGCCGACGAACGTTCCCGAGTGTGTAACATTTGCGGAGAAGTGTTCCAGCACTTTTTCTACTTGGAAGAGCATTTGAAAAGTCACGGCAGTCGAATTGCTATAGAAAATATAGAAAAAGAAGAAGAGAAGAAGTATATCTGTCCGGTGTGCAATAAAGGTTTCAAACTACACTACTATTTAAAATTACACAGTTTCACACACACAAAACAGAAGCCTTTCATTTGCCAACAATGCGGCAAGGGTTTTATAACGAAAGGCAAACTCAAACGCCATCTTGAAACTCACACGGGGCTGAAGAAATACCAGTGTCACATTTGCTATAAATACTTTACTAGGCCTAGCTATCTTAGGATACACGTCAGAACCATTCACGGGAATCAGGATTATAACTTTAGGGTTGCCAAAAATTATGGGGTGGGTTTAATTGACATGATGGTGGGGAATCAGTGA
Protein Sequence
MEVDPVDPLSTYDFSYTIYGNTPQHNISYTTKPESQEYGSDIKNPTVNNLSDAPNDHNGDANLPNTVTESKNICNGNLNNKNSIKRSTKSKIKKEKSSYWCEKIREEGFPFYACAICNVNFPLLRELDKHVNSHKGRPTSYDLRQKSRLRRKMQKKEKKKLKKQGKKIKSELDVEIKPEDGYIGNEKASEYNPDNLAYIPNGNTPDGKISNESEGREPKNGGIPKDSNEYNLEKIYKCYACQKQFSLSYYLKLHVRSHTDEKPYTCSICGLSFITASHLGRHNKRIHLAIRHQCRICFKKFSRFEYLKKHFDKEHSDDKLEGEPYDYNIILPYLKELEEELLKEKENEKTEPKEKTEKPDEIQVGDKNVHWIDTGIEPKDRVEVKDFSIEQVVSHLDIMMDGIEEPAIEVKTEQEWLDVKEEDGITVELVKEEYGDGDGGDGGADNAFDDVKDEDYSDEDYFPSNTWTTATIPDLPPAYPRRSDGTLQCDICKKNISSLSYMRIHMRTHTGEKPFKCRICDRGFITSSKMNRHVLTHQPEDEKPEDKEVKSEGEGVEKDGGRDGKSDKGFSDEDYFPANTWTTATIPDLPPTYPRKPDGTLQCEICEKTISSVTYMRIHMRTHTGEKPFKCRICGRGFITSSKMNRHVLTHQTDDDKDIKTEETEVKSEGDGTEKDEDRDKKAGKRTKKKKTKFTKKAKEGVKQKKPYQKRPYSCDHCKKKFLHKDTLEVHRQTHEGQEKVLKCQFCLEICENEGSLKTHEATHEGPKPYLCTQCGKTYKRRDSMIYHRHTHKPDRLFQCEVCTKTFNAPCKLQRHIMSHRSARYTLRYECPVCAHMFHTKYHVQMHLATHQKEGLILEENRNDILAMVLQNARKIPKQTDGIIPSIPPPADERSRVCNICGEVFQHFFYLEEHLKSHGSRIAIENIEKEEEKKYICPVCNKGFKLHYYLKLHSFTHTKQKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKYFTRPSYLRIHVRTIHGNQDYNFRVAKNYGVGLIDMMVGNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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