Basic Information

Insect: Sesia bembeciformis
Gene Symbol: -
Assembly: GCA_943735985.1
Location: CALSEZ010000609.1:268006-273199[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 6.8e-07 4.7e-05 24.0 0.3 1 23 165 187 165 187 0.98

2 14 0.0034 0.23 12.4 0.8 1 23 193 216 193 216 0.95

3 14 0.00037 0.026 15.4 1.0 1 23 222 244 222 244 0.98

4 14 2.8e-06 0.00019 22.0 4.0 1 23 249 271 249 271 0.99

5 14 9.9e-06 0.00068 20.3 2.0 1 23 277 299 277 299 0.97

6 14 2.7e-07 1.9e-05 25.2 0.6 1 23 305 328 305 328 0.96

7 14 2.1e-05 0.0014 19.3 2.3 1 23 334 356 334 356 0.98

8 14 2.1e-05 0.0014 19.3 0.9 1 23 362 384 362 384 0.98

9 14 0.0014 0.094 13.6 1.8 1 23 390 412 390 412 0.99

10 14 7e-08 4.8e-06 27.1 1.4 1 23 418 440 418 440 0.98

11 14 4.1e-07 2.8e-05 24.7 1.4 1 23 446 468 446 468 0.98

12 14 0.14 9.5 7.3 2.9 1 23 474 493 474 493 0.94

13 14 4.3e-07 3e-05 24.6 0.7 1 23 499 521 499 521 0.98

14 14 5.6e-05 0.0039 18.0 3.8 1 23 527 549 527 549 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	6.8e-07	4.7e-05	24.0	0.3	1	23	165	187	165	187	0.98
2	14	0.0034	0.23	12.4	0.8	1	23	193	216	193	216	0.95
3	14	0.00037	0.026	15.4	1.0	1	23	222	244	222	244	0.98
4	14	2.8e-06	0.00019	22.0	4.0	1	23	249	271	249	271	0.99
5	14	9.9e-06	0.00068	20.3	2.0	1	23	277	299	277	299	0.97
6	14	2.7e-07	1.9e-05	25.2	0.6	1	23	305	328	305	328	0.96
7	14	2.1e-05	0.0014	19.3	2.3	1	23	334	356	334	356	0.98
8	14	2.1e-05	0.0014	19.3	0.9	1	23	362	384	362	384	0.98
9	14	0.0014	0.094	13.6	1.8	1	23	390	412	390	412	0.99
10	14	7e-08	4.8e-06	27.1	1.4	1	23	418	440	418	440	0.98
11	14	4.1e-07	2.8e-05	24.7	1.4	1	23	446	468	446	468	0.98
12	14	0.14	9.5	7.3	2.9	1	23	474	493	474	493	0.94
13	14	4.3e-07	3e-05	24.6	0.7	1	23	499	521	499	521	0.98
14	14	5.6e-05	0.0039	18.0	3.8	1	23	527	549	527	549	0.98

Sequence Information

Coding Sequence: ATGTCTGAATTTTGGAATATGGACGGCTTCTGCCGGTGTTGTCACTCCGAGGGCACTTTCAAGAGCCTCGGAGTCCCTTACGTTTACGACGAAAGGCAGGAAATTTATTCGATCATGCTAAGAGAAAGCTTTGATATAAATATATTCCTAACATCAGGTGTCGAGCCATCCTTCTACGGCATCTGTGATATCTGTATACCCCGCCTCCGAGATGCAGCTCTCTTTAAAAAACAGGTGTTAGCTTGTGAGGAACGATTTTTGGAGTATTATAACAGACATGGGCTCAAGAATGAAAACCTACCCCCAATGGATATATACATAGCGCCAATAGAAATACCAGAAGATGTTCCCCTGTCATCTCTTAAGAGTAGATCTTGTAAGAAATCCGCTCCAATTGATGATAATTCTGATCCAGATGCTGATTGGACTATGCCGGATGTGAGTGAAGACGAAGACTTCAACAAGCCTCAAGCTAAAACCAATAGGAAAAAATTCGCGTGTGAGGTCTGCGAGAAACAATTTTCTTATAATGGGTCATTAGAAGTCCACATGAGGACTCATTCGggcgaaaacacgcatcagtgcctcatttgcaacgtaaaattcgctttaaccagggaactgacgaagcatattcaagcatctcatatacaaaatggaaaattcccctgcaacgcttgcacagagacatttcaaaaagctcgccaattaaaaaaacatttgaacagccataacgctgaaaagttcaaatgcagtttctgtgacaaagaattccaacggaaaaagaatttgcgagaacatttaaaaacccacacgggtgaaaagaaattcgcttgcaacatttgtagtaaatcattcggccacaatcagactttaaaatcgcatattttgactcatacaggggagaggccttacgtttgtgacgtgtgcggtcgtaggtttccacaaaggacgcatttaaaaaggcatataatcataattcataccggtataaaacctttttcgtgtaaagtttgcagcaaacagttttcaagtaaaagttacttgtcgatacacgaaagacagcatacgggggaaagacctttctcatgtgaagtgtgtaagaaagatttcactgcatatacgactttaaaagttcatatgagagtgcatacaggacaaaagccttacagctgcagtttctgcagtaggcaattcgctcaaatggctagttttaagctccacgagaggacgcatacaggggagcgcccattttcatgcaaagtttgcaaaaaaaccttttcagataatgggtatttgaaaattcacatgcgagtgcataccggggaacggccattttcgtgtgaaatatgcaaaaggtcttttagagaaactgggcagttgaagcgacatatgcgcgtgcatacgggtctaaaaccgtatacgtgtaaaatctgcaataaacagatagggaatttatcgaagcatatgaaagtgcattcggacgaaaggccttacaattgcactgtgtgtaacaagcagttttctgtgaacgggaatttgaaattgcacatgagaattcatagcggtgagaggccgtacagttgcgatgtgtgtaacagtcagttcactcaaagcagtggactgaaaaggcatagatgtactcatatggggaaaACGGACGGTTAA
Protein Sequence: MSEFWNMDGFCRCCHSEGTFKSLGVPYVYDERQEIYSIMLRESFDINIFLTSGVEPSFYGICDICIPRLRDAALFKKQVLACEERFLEYYNRHGLKNENLPPMDIYIAPIEIPEDVPLSSLKSRSCKKSAPIDDNSDPDADWTMPDVSEDEDFNKPQAKTNRKKFACEVCEKQFSYNGSLEVHMRTHSGENTHQCLICNVKFALTRELTKHIQASHIQNGKFPCNACTETFQKARQLKKHLNSHNAEKFKCSFCDKEFQRKKNLREHLKTHTGEKKFACNICSKSFGHNQTLKSHILTHTGERPYVCDVCGRRFPQRTHLKRHIIIIHTGIKPFSCKVCSKQFSSKSYLSIHERQHTGERPFSCEVCKKDFTAYTTLKVHMRVHTGQKPYSCSFCSRQFAQMASFKLHERTHTGERPFSCKVCKKTFSDNGYLKIHMRVHTGERPFSCEICKRSFRETGQLKRHMRVHTGLKPYTCKICNKQIGNLSKHMKVHSDERPYNCTVCNKQFSVNGNLKLHMRIHSGERPYSCDVCNSQFTQSSGLKRHRCTHMGKTDG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -