Sbem008653.1
Basic Information
- Insect
- Sesia bembeciformis
- Gene Symbol
- -
- Assembly
- GCA_943735985.1
- Location
- CALSEZ010000297.1:829779-830981[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.00075 0.22 12.0 0.2 11 43 78 107 75 108 0.88 2 6 1 3e+02 1.9 0.1 16 28 212 224 208 238 0.87 3 6 6.7e-05 0.019 15.3 0.5 13 43 239 266 225 267 0.85 4 6 0.014 4 7.9 2.4 5 26 260 281 260 283 0.91 5 6 0.00028 0.081 13.3 1.8 13 40 296 320 286 325 0.86 6 6 5.7e-06 0.0017 18.7 1.6 13 44 324 352 320 352 0.90
Sequence Information
- Coding Sequence
- ATGGTGCGAAAGTTGATGATAAAACGAAGAAATGTCGAGTATGTTTTGCAGTATAGCAATGTAACGCCGTTCATGTGGTATAAGGGCAGATACAGATGCTTCTACTGCACGGAGCCCATGAAAGATCCCGACTTGCTAAGAGAGCATACGGCTAAAATTCACCAATTTGCCAACCTTGAGCTGGTAGTCTTTGACAGGACTAAAAAGAACAGAAATAGGGAAGCAGCAGTCAAAATTGACGTGACTAACATCGTTTGCAAGTTATGCAACCAGGCTATAGCCAATTTGGAACAGCTCATCCATCATCTGATAATAGCTCATGATGCAGAATATGACGTTAGTGTCCCGAACTGCCTGCTGCCTTTTAAACTTGATAGAGAGAACCCAACTTGCCCCACCTGCAATATGAGATTCGTCTTTTTTGAATATTTGCTTCGCCATGCGAATAAACACCATCTTTCTCATGACTATATTTGCGATGTTTGTGGTACCAGTTTCCAAGGAGAAAACCATTTGAAAATGCATAACAGATATTACCACAGAGAAGGTGGCTATACATGCGACCACTGTGGGATCTCTCTGGCAACGTTATCCAAAAAGATTTTGCATGAGAAGAACGTGCATTTAGCCAATCTGGCTACTTGTCCCCACTGTCCCGAGACCTTCAAAAGTCCATATTTCAAGAAGCTGCACTTGGCCAATGTCCATGGGGTTGAGGAGTTGAAAATCAAATGCCCGTATTGTCCAAAGGTCTACCCTCAGGAGAGTATAATGTCTAGACACATGAGACGTGTACATTTACGAGAGAAGAATGTGGAATGCGAAATATGTGGAGACAAGTTCTTCGGGCCTTACGACGTGAAGCTTCACATGATGAAGCATAATGGAGAAAAGAAATTCGTTTGCACAGTGTGCGGAAAGAAATTCTCTAAAAAGAGCAACTTGAATTCTCATTTAGTAATACACACGGAGAAGAAGAACTTCGTATGCGAATTCTGTAATAAAAGTTTTGCGTATCAGACTAATTTGAAGATGCACATCAGAAGTCGTCATTCTACGGAATATCTGATTGTAGAAGAAAATTTTGCAGATGGCGTCGGAGGAGTGGGCGAAATTGATGAGAGTGGAATAGTTCAAATGGAATTCATTAAGGATGATCTCGAAGGGGCTGAGATAACTGGACAGTATATTGTCCAGGGATAA
- Protein Sequence
- MVRKLMIKRRNVEYVLQYSNVTPFMWYKGRYRCFYCTEPMKDPDLLREHTAKIHQFANLELVVFDRTKKNRNREAAVKIDVTNIVCKLCNQAIANLEQLIHHLIIAHDAEYDVSVPNCLLPFKLDRENPTCPTCNMRFVFFEYLLRHANKHHLSHDYICDVCGTSFQGENHLKMHNRYYHREGGYTCDHCGISLATLSKKILHEKNVHLANLATCPHCPETFKSPYFKKLHLANVHGVEELKIKCPYCPKVYPQESIMSRHMRRVHLREKNVECEICGDKFFGPYDVKLHMMKHNGEKKFVCTVCGKKFSKKSNLNSHLVIHTEKKNFVCEFCNKSFAYQTNLKMHIRSRHSTEYLIVEENFADGVGGVGEIDESGIVQMEFIKDDLEGAEITGQYIVQG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01182092;
- 90% Identity
- iTF_01341607;
- 80% Identity
- iTF_01341607;