Basic Information

Gene Symbol
-
Assembly
GCA_943735985.1
Location
CALSEZ010000492.1:236763-238388[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.013 12 6.5 0.2 22 45 110 136 92 137 0.80
2 4 0.00093 0.88 10.1 0.1 23 46 209 231 202 231 0.87
3 4 0.028 26 5.4 0.1 22 46 291 322 268 322 0.74
4 4 0.076 72 4.0 0.1 23 46 399 421 385 421 0.86

Sequence Information

Coding Sequence
ATGGATATAAATAATTCCCATAATCAAAGTTATTGGTTCGTTCTTCGAGAAGACCAGAGCAACGTCATATTTAGCAGTAATAACTTCCCTATAAACAGTCCACAAAGACCAGAGACAAGGTATGTTGTTGATACCGTTGATAACAGGCAATACATTCAATTAAATGAATCTGATGTGCCCATTGCAGCACATGAAGAAAGTACAGAGACATGTAGAAAAGAAATTATTAAACAGTCTAAAGAAGAGAACAACTTTTGGGATAGAAATAAAATTAAATTGCTTCTTACTTTATGTTTAGAAAACAAATGTAAGAACTTGTATGAGAGAAGATCGTATGCAGTATGGAATCAAATAGCTGCCCTTGTGGGGGCTTCTGCAGAGGAATGTAATAAAAAATATAAGAATCTAAGGAGAACATACATAAGGTTGTTAAAGAAAAAAGCGGAAGGGAAAGAGATAAAGTGGGTGCATTTCAACATTTGTGAGGAAGTATTTAAGGAATGCAAGTCACTGCCACTGTCCATCTTAGAACCCTGGGATGATGGACGAGTACGCACTCTTATACACCTCTACTTGGATAATCTAAGTAGGTTCAGAGACCCGGATTGCCTCAATAAAGATGTATGGAAGGACATTGCTATGCATCTCGGCACAACTGAATACAACTGTTATCACAAATTTAAGAATTTGAAAAGAGCATACTTTAAAATACTAGAGAAAAACCGTGAAACAGAAAAGCAAATTAAGTGGCCATATCAACACTTATTTGACAGGATATATTATGATTACAATCCAGATCCTAATCCTTGGAATAGAAATACTATAAAACAGTTGCTAGATGCCTATGCCCAAATAGCTCATAAATTCAAAAACCCAAAGTTTATGAAGAAAGAACTTTGGAAAGAGATATCCAGAGTTGTAGGAGAGAGCCCCAGTAGCTGTGATAGAAAGTTTAGAAATTTGAAACAAACATATATTAAGTTAAAAATGAAAGTGCAGTCTGATAAAATAATTACAAGATGGCGTTACTTTAAAGATTTTGAAATGATATACAGCAATGAGACTCATCACACCAGTACGGAGGTGCAGAATGTTAACAGATGTCAGGAGGAGGATTATATTAAGCAGCTATTAATATTTTACATAGATAATAAAGAGAAGTTTAGAGACTCACTAACAAAAAAGAAAGTCTTATGGAGAATGATTGGGCCAAAACTAGGATTGTCACCAGAGGAATGTAACAGAAAATTTCGAAACTTAAAACAAACTTACATAAGACTGTTAGAGAAGAAAAGACAGACTGGAAAATGTAACAAGTGGCCATATTATTCATATTTTGAAAAGATTTTTGATGAAAATGAAATTGGGGATTCCAATAAGATTGGTGAAGATGTGAGGCTGTCAGAAATACGAAGAGTAGTAAAAGATGTCCAAGAAAGGAGGGATAACACCAAAAAGTTTGATAAACTCATGAAAGCTGTTGAGGAGTCTAACAATATACAGAGGGAAAGAAATAAAATATTGCAAGCATTATTGAATAGAAAATGA
Protein Sequence
MDINNSHNQSYWFVLREDQSNVIFSSNNFPINSPQRPETRYVVDTVDNRQYIQLNESDVPIAAHEESTETCRKEIIKQSKEENNFWDRNKIKLLLTLCLENKCKNLYERRSYAVWNQIAALVGASAEECNKKYKNLRRTYIRLLKKKAEGKEIKWVHFNICEEVFKECKSLPLSILEPWDDGRVRTLIHLYLDNLSRFRDPDCLNKDVWKDIAMHLGTTEYNCYHKFKNLKRAYFKILEKNRETEKQIKWPYQHLFDRIYYDYNPDPNPWNRNTIKQLLDAYAQIAHKFKNPKFMKKELWKEISRVVGESPSSCDRKFRNLKQTYIKLKMKVQSDKIITRWRYFKDFEMIYSNETHHTSTEVQNVNRCQEEDYIKQLLIFYIDNKEKFRDSLTKKKVLWRMIGPKLGLSPEECNRKFRNLKQTYIRLLEKKRQTGKCNKWPYYSYFEKIFDENEIGDSNKIGEDVRLSEIRRVVKDVQERRDNTKKFDKLMKAVEESNNIQRERNKILQALLNRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-