Sbem008637.1
Basic Information
- Insect
- Sesia bembeciformis
- Gene Symbol
- -
- Assembly
- GCA_943735985.1
- Location
- CALSEZ010000297.1:658175-665745[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-08 2.2e-06 27.6 0.0 1 35 214 249 214 254 0.90
Sequence Information
- Coding Sequence
- ATGCCTAAAAGGGGTGAAAGTAAAGTATATTTTGGAATATGCAAGTGTTGTCTGAAAGATGGATTCTACAAAAGTATGTGGTCCGAATATGTGTATAACGATGAAAGAGAAATATACGGGGAAATGTTGATAGGATGCTTCGCTATCACTTGGGAGAGATCAACAGATCAAATAGAGTTGATATGTGATGACTGCATAAAACAGCTGCGAGATGCCTGGTCCTTCAAGGAGCAAATCCTGATGTCTGAGAAGACTCTGTTTGAACAATTTGAGTTTACTAAGGTTGAGAGAGAAAAGAAGAAAGAAAAGCTAATGTCATTGAAGTTTGACCAAGTTCGTGGCTCTTCACTGCGCTCAGCAAGTCCCGACACTAACGTGGAAGTGAAGGTGGAATCCCTGAATAACACAGGGGAACAAAGCGATGAGGAATTTATGGAGGTTACATATCTGGATGACGATGACAATAAGGAGTACATAGAAATCATGGTAGCCGAAGAGGGATCCGATGAAACGATCGTAACGCCTAAAAATACGGAAACTAAAACGCCAACAACAGAAGTTTCCACGGAAGAAAAGCCAAAAAGGAAATGGCCGAAAAAGAAAAAGAAGTCAGAACGAACTAGGAGCTACAGGAATTATACTGAAAAGCAGTTGACGAATGCTATCGCAGCTGTTAAAAGTAAAAAAATGACATTATTACAAGCATCAAAGAAGTTCAATGTTCCCAAGAAAACGCTGGCCTACAAGATTGTTGATAGACCTAAGATTGCGGACACAACAAAACTCGAAGAACAAGCGAAACATCAACGCTTCATCGACGACCTAAAGAACATCCTCACGTACACCAACGCAACGCCTTATAAAGCCACTTACTCCAGATATTACTGCCCTTACTGCACCTCGCCACAACACTACGAAGAACCCGATGACCTCCGGAAACACATGCGGATAAGACATGCATCAAATCAAATTAACTGCATAGAAGCCTTGATGAGACCGGTCTGGTCCAATGAAGTCATCAAACTGGATATTGATAAACTACAATGCATCGTCTGCAACCAACGTCTCATGACATGGAACAGTATGTTCCAGCATCTTCAAGATTCCCACTCCGTTGAATTAGAAGAGGCGTATACAAGAGTGATTCCTTACGTATTAAATTCTGACCATGAGtgtgctttatgtgaagaaaatttccaaaattatcaccttctagacagccatatgaatgctcattacaataattacatttgcccggactgcggtgacagttttctatccaaaagccgcttaagtaaacacgttttaatacacgatgtagggcagttcccgtgtgaagtatgcggcaaagtgttTTCCTTGGAAAAGTACATGAAAAAGCATGTCACTTACAGCCACACGTCTAACTCTATAAAGTGTCGTTACTGCGACGAAAGGTTCCACGGCGATTATCAGAGACATTTGCACGTGTTAGATAACCATAAAGAGAAAGTGAAGTCTGTAACGTGCGAGTTGTGCGGACTTGTATTTAATTGGCGACCTTATTATATGAAGCACATGAAAAGGGAGCACGATACACAGCAGTTTAACTGCAAGAATTGTTCGAAGCAGTTCTTTTCTAGAAGCGAGTTGAGAAAACATCGGACAATTCACTCAGGGCAAAAAAATCATCGCTGCAACATTTGCGATAAGAGATACTCGAGTCTGGTTTGGTTGAGGCAACATATGAGGATCCACGATGAGGGGAATAAAGCTACAATTATAATTCTTAGGGAGAAGAAAAAGGATGAAACAGAAGATCAATGA
- Protein Sequence
- MPKRGESKVYFGICKCCLKDGFYKSMWSEYVYNDEREIYGEMLIGCFAITWERSTDQIELICDDCIKQLRDAWSFKEQILMSEKTLFEQFEFTKVEREKKKEKLMSLKFDQVRGSSLRSASPDTNVEVKVESLNNTGEQSDEEFMEVTYLDDDDNKEYIEIMVAEEGSDETIVTPKNTETKTPTTEVSTEEKPKRKWPKKKKKSERTRSYRNYTEKQLTNAIAAVKSKKMTLLQASKKFNVPKKTLAYKIVDRPKIADTTKLEEQAKHQRFIDDLKNILTYTNATPYKATYSRYYCPYCTSPQHYEEPDDLRKHMRIRHASNQINCIEALMRPVWSNEVIKLDIDKLQCIVCNQRLMTWNSMFQHLQDSHSVELEEAYTRVIPYVLNSDHECALCEENFQNYHLLDSHMNAHYNNYICPDCGDSFLSKSRLSKHVLIHDVGQFPCEVCGKVFSLEKYMKKHVTYSHTSNSIKCRYCDERFHGDYQRHLHVLDNHKEKVKSVTCELCGLVFNWRPYYMKHMKREHDTQQFNCKNCSKQFFSRSELRKHRTIHSGQKNHRCNICDKRYSSLVWLRQHMRIHDEGNKATIIILREKKKDETEDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01341745;
- 90% Identity
- iTF_01341745;
- 80% Identity
- iTF_01341745;