Sbem013721.1
Basic Information
- Insect
- Sesia bembeciformis
- Gene Symbol
- -
- Assembly
- GCA_943735985.1
- Location
- CALSEZ010000527.1:30381-30779[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-12 4.5e-10 39.5 0.0 4 41 18 55 15 57 0.91
Sequence Information
- Coding Sequence
- ATGCCACGAACTAGACAGCGAACGACGTCAAAGGCCAGTTGGACCTCGTCTACGTTAGAGAGTGCAATAGAAACTATACGAAAGGAAGGAATATCAGTTAATAAAGCGGCACAGCAATTTAAAATACCCTATAGCACGCTGAAGAAACGGTTCAGGTTAGCAAATAGCGATGATATTACTTACAGTCGTTCTCCGCTGCTTGGGAGAAAACCTGTGTTCACTAGTGAACAGGAACATATACTTGTTAACCATATCATTGATATGTCGAATATGTTTTATGGTTTAACAGGCAGCCAACTGCGTAAAATATGCTATAATATGGCTGTGAATATCGGTGTTGAAAAAAGAtttaacactgaaaaaaaattgctggaaaagattggttgtttgggttcatga
- Protein Sequence
- MPRTRQRTTSKASWTSSTLESAIETIRKEGISVNKAAQQFKIPYSTLKKRFRLANSDDITYSRSPLLGRKPVFTSEQEHILVNHIIDMSNMFYGLTGSQLRKICYNMAVNIGVEKRFNTEKKLLEKIGCLGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01341080; iTF_01516791;
- 90% Identity
- iTF_01341080;
- 80% Identity
- iTF_01341080;