Sbem005888.1
Basic Information
- Insect
- Sesia bembeciformis
- Gene Symbol
- -
- Assembly
- GCA_943735985.1
- Location
- CALSEZ010000197.1:11232-11672[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-11 1.7e-09 37.6 0.0 1 40 12 51 12 56 0.90 2 2 4.4 5.7e+02 0.7 0.0 23 31 98 106 98 106 0.86
Sequence Information
- Coding Sequence
- ATGTCTTCTCCAAGACGAAAACGGGCTACGTGGTCCGAAGAAAGCTTGAGAGCGGCAGTTAATGATGTGCGTTGTGGCCGATTGTCGACTTACAAAGCTTCGgcgcaatatggcattccgagaaggactattagaaatcatctcaaaagtggtattttacataagagcttaggcagaaacgctatatttacgaaagagcaagaaaaagatttcgtcagccgtataataaagtttgctgaaataggaatacctcttacgccaaaaatgattcggattcaagcatttgctttttgtgacaaatataacattcccaataatttcaacaaagaaacaggacttgccggaaaaggctggttgagattatttttacaacgaaatccaaacttagcaaaacgaaaagtacaattcctaaaaccctgctcgagcccagaaattaaataa
- Protein Sequence
- MSSPRRKRATWSEESLRAAVNDVRCGRLSTYKASAQYGIPRRTIRNHLKSGILHKSLGRNAIFTKEQEKDFVSRIIKFAEIGIPLTPKMIRIQAFAFCDKYNIPNNFNKETGLAGKGWLRLFLQRNPNLAKRKVQFLKPCSSPEIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01341071; iTF_01341073;
- 90% Identity
- iTF_01341071;
- 80% Identity
- -