Sbem011590.1
Basic Information
- Insect
- Sesia bembeciformis
- Gene Symbol
- -
- Assembly
- GCA_943735985.1
- Location
- CALSEZ010000419.1:30564-44056[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.6e-10 3.4e-08 33.4 0.0 4 39 175 211 172 215 0.89 2 4 3.9e-11 5.1e-09 36.1 0.4 2 39 227 264 226 267 0.92 3 4 1.6e-14 2.1e-12 46.9 0.0 2 45 282 326 281 326 0.96 4 4 1.4e-17 1.8e-15 56.7 0.0 1 43 333 376 333 377 0.96
Sequence Information
- Coding Sequence
- ATGCCCGGCCACGGACTGCCTCAAGTAAAATGCGAACCGCCTTCCGACGACGATGACAGCAATTCACAATTTGCCCTCGGATATTTATCGAATAAGTTGCCTTCATTAGGACTCTGTTCAGTAAAGGCAGAATCAGAGTTCCGTGCACTCGAAAATGTACCAGTGCACCTTTTACATTTACAGGGTCCAAACAGTTTGGAAGAGCTGGCACCACTGGCACCAGCAGCGCCAGCGGCTACTCCGGTGTGTGTCAAACAGGAGCCCACAGAGAGTCCACCGAGTAACACACTGGAGACTCTTGAACCGGCACCACATAATACTACCTCTGCACTCATTGACAGACACTTGACGATGCTCAACTCTAGTGAAATACCAGACTCCTTAGACTTCACTCCCTTACTCGCTGTCAAAGATGAACCACTTTCTGAAGGCGAACAACACCAGTTAAGCGGCGAGGACACGAGCGACTCGTGCAGCACCGAGCCCATACCGCGAACTAGTCCCAAAAGCTGGACTCAGCAAGACATGGACAACGCTCTCGAAGCGCTCAGGAAACACAACATGAGTCTGACTAAGGCATCAGCAACGTACGGCATTCCTTCGACAACTCTCTGGCAACGCGCTCACAGACTGGGCATAGATACACCCAAAAAGGAAGGCGGTGCCAAGTCGTGGTCGGACGCGGATTTGCGGGCAGCTCTACAAGCTCTAAGGGCCGGTGCCATTTCCGCCAATAAAGCCAGCAAGGCTTATGGCATCCCAAGCAGCACCCTGTACAAGATCGCACGGCGCGAGGGCATCCGTCTGGCGGCGCCGTTCAACGCGGCGCCGACGGCGTGGCGGCGCGGGGACTTGCAGCGCGCGCTCGCCGCCATCCGCTGCGGCGCCAGCTCTGTGCAACGCGCCGCCACGCAGTACGGGATACCCACAGGTACACTCTACGGGCGATGCAAGCGAGAAGGCATCGAGTTGTCCCGCTCCAACCCCACCCCATGGTCCGAAGACGCCATGGGGGAGGCCCTTGAGGCCGTCAGAGTGGGTCAGATGTCGATCAACCAGGCGGCAATCCATTACAACCTGCCGTACTCCTCGCTGTATGGACGTTTTAAGCGATGCAAATACCAGGCGCCGATACCCCAATCAACCCACCAAAATCTCCCCGAAAACCAGGAGATGGATCATCAACATCAGGAACTGTACTACAACCAAGTCCTTCCTCCCGACCAGAACGCGCCATATGCACATCACTATCTCACCGACCACACAATACATGACATTAACGGTGTAAATGTCATACAGGCACAATATGCCGGTCAAATGTACTGCACAGGCAATGCTGTAACTAGCTGA
- Protein Sequence
- MPGHGLPQVKCEPPSDDDDSNSQFALGYLSNKLPSLGLCSVKAESEFRALENVPVHLLHLQGPNSLEELAPLAPAAPAATPVCVKQEPTESPPSNTLETLEPAPHNTTSALIDRHLTMLNSSEIPDSLDFTPLLAVKDEPLSEGEQHQLSGEDTSDSCSTEPIPRTSPKSWTQQDMDNALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGGAKSWSDADLRAALQALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRGDLQRALAAIRCGASSVQRAATQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQAPIPQSTHQNLPENQEMDHQHQELYYNQVLPPDQNAPYAHHYLTDHTIHDINGVNVIQAQYAGQMYCTGNAVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -