Basic Information

Gene Symbol
Kdm5
Assembly
GCA_943735985.1
Location
CALSEZ010000437.1:1-26005[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-24 2.9e-21 76.1 0.0 2 89 101 184 100 184 0.93
2 2 2.1 4.9e+03 -1.6 0.0 35 65 267 298 264 311 0.64

Sequence Information

Coding Sequence
ATGGGAAAATGTGATGAGGCTAATGTCGAAGTTAACATGGGGGACTCGGCGTCCCCCATGAAACCTGATAATTTCACGTTTACCGTGCCGCCCGAGGCTCCTGTGTTCGAGCCCACGCCTGAGGAGTTCCAGGACCCTTTGGCGTACATCAGTAAAATAAGACCTATCGCCGAGAAGTCTGGGATCGCCAAGATCAAACCCCCTCCGCACTGGCAACCACCATTCGCTGTGGACGTAGACCGGTTAAGATTTATACCGAGGATACAAAGGCTAAATGAACTGGAGGCAATAACCAGAGTGAAACTGAACTTCCTGGACCAAATCATCAAGTTCTGGGAGCTGCAGGGCTCCGTGCTCAAGATACCCACAGTAGAGCGGAAGCACCTGGATTTATATTCTCTACACAAAGTTGTTAAGGAAGCAGGTGGCTTCGAAGCGTGTTCAGCGGAGCGCAAATGGTCCAAAATCGCGCGTCGCATGGGCCACCCCCAAGGTAAAGGCATCGGGTCCATTTTGAAGAGTCATTACGAAAGGATTCTATACCCTTATGATGTGTTCAAGAGCAGTGGAGTGATTACTGATAATAAGGAGACGAAAATCGAAGTCAAAGGCGAACAAACACCGGAAAAACAGAATCCAACGACCCGTGCTCGATCAGCCTCCAAATGTCCCCCTGCTGCCACCCCACCACCACCAGCACGCAGATATAAATCAGAGCCAGAACCAGCGGCAGAGGGTAGCCATACCGAAGGGGCCTTGGCTGGTGCTGAAGAGGAGAAAAAAGTTGGCGATGAGAAAAAGTTGAAGACGCCTGTGAAAGAGGAGAATGGGGAAACTCGACGGAGTCCCCGCGAAAACAAATGGATGTCGGCAGCGGGTAGTTGCGGTGCCCGTGGCGGACGCGGCGCCAGCTCCACCCGTCTAAGGGAGCACCGCATGTCCAACATGACCGTGAGCGTGACGCCCGCTCCCGCTCCCGTTCCGCCCGCGGAACACGTGCCGCGCGCGGACGACCCGCTAGCAAAATACATGTGTCACGTATGCGGTCGCGGTGACATCGAAGAACAAATGCTATTATGTGATGGTTGTGACGACTCTTACCACACATTCTGTCTGGTGCCACCGTTAGCTGATGTACCGAAAGGGGATTGGAGGTGCCCCGTTTGTCTTGCTGAGGCGGTATCAAAACCAGCAGAAGCTTTCGGCTTTGAACAAGCTTCTCGGGAGTACACATTGCAGCAGTTTGGTGAAATGGCTGACCAGTTCAAATCGGACTATTTCAATATGCCAGTACACATGGTGCCAACATCGACAGTGGAGAAGGAATTCTGGCGCGTCGTGTCTTCCATAGATGAGGATGTCACGGTAGAATATGGTGCCGACTTGCATTCCATGGACCACGGATCGGGGTTCCCAACGAAAACAAGCGCCCACTTATATCCCGGGGAGCAACAGTATGCAGAGTCCAGTTGGAATCTGAACAATTTGCCCGTTTTAGAGGGCTCCGTGCTTGGACATATCAATGCTGATATATCCGGGATGAAGATCCCTTGGCTGTACGTGGGAATGTGCTTCGCAACATTCTGTTGGCACAATGAAGACCACTGGAGTTATTCCATCAACTATCTGCATTGGGGGGAGCCTAAGACTTGGTACGGCGTCCCCGGCACTAAAGCGGAACAATTTGAAGCTGCAATGAAGGCGGAAGCTCCTGAATTATTCCAATTACAACCGGACTTACTTCACCAGCTGGTCACCATCATGAATCCCAACATACTTATGAAGGCCGGAGTTCCTGTTTACAGAACGGATCAACACGCGGGCGAGTTCGTTATTACGTTCCCTCGCGCGTACCACGCCGGGTTCAACCAGGGGTATAATTTCGCCGAGGCCGTCAATTTCACACCGGCCGATTGGCTAAAAATGGGTCGCGAATGCATCGCCCACTATTCCACGCTACGTCGTTATTGCGTTTTCTCTCACGACGAACTAGTTTGCAAAATGTCGCTCGAAGCGGACTCGCTTAGCTTGACGGTCGCTTTAGCTGCTTACAGGGATATGCGTACCATGCTTCACGACGAGAGGAAACTCAGGAAAGGATTGCTGGATTGGGGCGTGACCGAGGCGGAACGCGAGGCATTCGAGCTACTAGCAGATGACGAGCGTCAGTGCCATCTGTGCAAGACAACGTGCTTCCTGTCGTGCGTGACGTGCGCTTGCACGACGCAAGTCGCCTGCCTGCGGCATTACGCCGCCCTCTGCGAGTGTGCGCCCGCCACGCACACGCTCAGATATCGTTACACACTGGACGAGTTGCCGGCCATGTTGGAAAAGTTGAAGAAGAAATCAGAGGCGTTCCGCGAATGGGCCGAAGCGGTACAAAATGCTTTAGATCCGGACACGCCCAAAACCTGCGACCTGGACGGACTAAGAGCCCACCTGAAACGGGCCCACGATCTGAAGATGCACAAAACAGAACTAGTCCGTGCCCTGGAAACCGCAATCGAAGACGCGGAAAAGTGTGCATCAGTCATACAACAGTTAGACCTGAACAAGATGCGCACGCGCACGCGACACCACGACCCCAAGTACCGGCTCACTGTTCACGAGCTGACTTTATTTGCGCAGGAGATCGATGGGCTAGCTTGTGTGCTACCAGAAGGGTCGGCAGTAAAGGAGGTGTTACGTCAAACGTCTGAGTTTGAGACTCGAGCCACTGACCTATTGATTAAAGACTTGGAGAACACCGACTCTGCTGTCGTCAGGGACTTAGAAGAGGTGGTAGAATTAGGTTCCCACCTCTGCATAGTCTTACCCCAACTGGCTCCACTACAAGCTCGTTTACAACAAGTGAAGTTTCTAGAAGAAGTCCGATCGTACCGAGAAGATTGTTCCACATTAACCCCTGAGGTGGTAGAGAAGTTGCTGCTAGAGGGTGCTAACGTGCTGCCACATTACAGGGTTGAGACTGAAAGGGCATTTCTGACGAGGCTTAAGGCCCAAGTGGAAGAGTGGGAATTCCGTGCTCGGGCAGTACTCATAGACACATCCCTTCCCCCTCGTGACCCTCGGGAAGACCTCATCCCCCCTCCGTACTCGACAGTGGCAGAGTTGGAGACTCTGCTGGCGGAAGGGGATGAGATAGAGGCGATGTTGCCTTCAAATCATGCTCTACATGCAGCTGTAACGCATGCTAAAGACTGGCTTAAGAAGGTGGAAGAAATGCAATCCAAAGACCTATATCCATATATGCACAGTGTAGAGACCCTCGTGAAAAGGGGACAGCAAATTCCACTGTCCCTTTTCGAAAAGGACCAGCTCGCCGCAGCCCTTCTATCCGCTAAGGACTGGAAGAGGGGAGCTTCTGACATGTTCCTCAAAAAGAACTGGAACTACTCGCTTCTAGAAGCATTATCACCCCGTACCCCCGACTCGGGCACCCCTCGACGTCGGGCAGCGAAAGGGGCCAATAACACCTCGGGAGCCATCGATCCGCCCCCTTCGTCTTTAGAGGCGGGGTTGT
Protein Sequence
MGKCDEANVEVNMGDSASPMKPDNFTFTVPPEAPVFEPTPEEFQDPLAYISKIRPIAEKSGIAKIKPPPHWQPPFAVDVDRLRFIPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKHLDLYSLHKVVKEAGGFEACSAERKWSKIARRMGHPQGKGIGSILKSHYERILYPYDVFKSSGVITDNKETKIEVKGEQTPEKQNPTTRARSASKCPPAATPPPPARRYKSEPEPAAEGSHTEGALAGAEEEKKVGDEKKLKTPVKEENGETRRSPRENKWMSAAGSCGARGGRGASSTRLREHRMSNMTVSVTPAPAPVPPAEHVPRADDPLAKYMCHVCGRGDIEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEAVSKPAEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEKEFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKTSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGTKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNILMKAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECIAHYSTLRRYCVFSHDELVCKMSLEADSLSLTVALAAYRDMRTMLHDERKLRKGLLDWGVTEAEREAFELLADDERQCHLCKTTCFLSCVTCACTTQVACLRHYAALCECAPATHTLRYRYTLDELPAMLEKLKKKSEAFREWAEAVQNALDPDTPKTCDLDGLRAHLKRAHDLKMHKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLTVHELTLFAQEIDGLACVLPEGSAVKEVLRQTSEFETRATDLLIKDLENTDSAVVRDLEEVVELGSHLCIVLPQLAPLQARLQQVKFLEEVRSYREDCSTLTPEVVEKLLLEGANVLPHYRVETERAFLTRLKAQVEEWEFRARAVLIDTSLPPRDPREDLIPPPYSTVAELETLLAEGDEIEAMLPSNHALHAAVTHAKDWLKKVEEMQSKDLYPYMHSVETLVKRGQQIPLSLFEKDQLAAALLSAKDWKRGASDMFLKKNWNYSLLEALSPRTPDSGTPRRRAAKGANNTSGAIDPPPSSLEAGL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00823708;
90% Identity
-
80% Identity
-