Basic Information

Gene Symbol
osa
Assembly
GCA_943735985.1
Location
CALSEZ010000816.1:88810-108878[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.3e-27 1.5e-23 83.4 0.0 2 89 302 386 301 386 0.95

Sequence Information

Coding Sequence
ATGGCTTTATCTGATGTTGCAGGCACGCAGAACGTCCCGATGCCGCCGCGGCCGTCGTCGTCGCTGTCAGACGGCAGCGGGCCCACGTCGAGGCCGGGTGGCGCGGCGCCTGGACCGGCGCCTAGTCCGGTCCCGCCGCCAGGCGCTATGGTCGCACAGCCCTATCACCACGGGTACAAGTCGCCCCACTACCCGCCGCAACCGTACCCATACCCGCCTAGAAATCATCACCCCTCATATCCGTATGGGGGCTACCGACCACCACCGCCACCGCATCCGCCGCAACATTATCCACCGCTAAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCCAGGCGGCCGGCACATGGGTCCGCCGGGCGCGGGCCCTGGCGGCGAGGGCGCGATGCCGCCGCCCACGGCGCCGGGCGAACACGACAACGGGCCCGCGCCGCCCGCCACCGCGCTCGTCACCACCGGCCCGGATGGTGCGCCGCTCGACGAGGGCAGCCAGCAGAGCACGCTCAGCAACGCATCCGCAGCGTCTGGCGAGGAAGCGTGTGGCACGCCGAAAGGCCGAAAGGAGTTCGGCGCAGGCAGCACCGCCCCGTCGCCGTCGCCGGGCGGCGGTTCGCACTCCGCGCACGACGACTACGACGCCTCGCCCTCGTCCTGGCCGCGTCCGCCCTCTAGTCCCGGCCGCAAGGAGTTCGGCGCGGGCAGCACCGCTGCGTCGCAATCGCCGGGCGGCGGCTTGCACTCTTCCGCACACGACGACCACGATGCCTCGCCCTCCTCCTGGCACCACCCGCCCTCTAGTCCCGTATTTAACAGTCACATACCGCCGGAGTCCTACAGATCAAAGaagtcggactcgctgagcaagttgtacgacatggatgacgcgcccgagcggcgcgtgttcgtggagaggctactcgcgtttatggaggagcgccggacgcccatcgccgcctgccccacgatatcgaagcaaccgctcgatttgtacagactgtatcttctggtgcgcgatcgcggcgggttcgttgagGTGACGAAAAACAAGACGTGGAAAGACATAGCGGGCTTGCTAGGTATTGGTGCTTCATCATCGGCAGCATACACGCTCCGCAAGCATTACACGAAGAATCTATTAGCGTATGAATGTCAGTTCGACCGCGGCGGCATAGACCCGCAGCCCATCATCAACCAGGTGGAAGCCTCTACGAAGAAGAAAAGTGGCAAATCCAATAGTGCTCCTAGTGCAGGGTCATCAAATTCGCAAGAATCATTCCCGGGCGGGCCGCCGAGCGCGAGCACGCCCATGGACGGGTACGGTGGGCAGTACCCAGGGTACCCACCACAACCCAACCAGCCGCAAGGCGGCGGGCCGGGCGGCGACAACCTCGCCGCCTCGAACCCGTTCGACGAGCCGCCGGGGCCCCGGAGACCCCCAGGTTACCAGCAGGGTTACGGGTATGAGTACGGATCACCATACCCGTCCAATAGGCCAGTTTACCCACCCTATGGACCAGAGGGTGACAGAGGTTACCCGGCCGGCGGCGCCAGCGGCGGCGAGTACCGATACGGGTATGGCGCGTACCGCGGCGGCGCGCCCGCCGGCACCCCACCGCCCGCCGCGCCATACCCCGAGTACTACCGCCATCCGCACCCACACCCGCACGCGCCCGCATCGCCGCACCCGCCCGTGCAGCACCCGCCGCACCAGCAGCACCAGCAACACCAGCCACACCAGCAACCGCCGCACGAGGTCAGTTCACAATACACATGA
Protein Sequence
MALSDVAGTQNVPMPPRPSSSLSDGSGPTSRPGGAAPGPAPSPVPPPGAMVAQPYHHGYKSPHYPPQPYPYPPRNHHPSYPYGGYRPPPPPHPPQHYPPLKQQQQQQQQQQQQQPGGRHMGPPGAGPGGEGAMPPPTAPGEHDNGPAPPATALVTTGPDGAPLDEGSQQSTLSNASAASGEEACGTPKGRKEFGAGSTAPSPSPGGGSHSAHDDYDASPSSWPRPPSSPGRKEFGAGSTAASQSPGGGLHSSAHDDHDASPSSWHHPPSSPVFNSHIPPESYRSKKSDSLSKLYDMDDAPERRVFVERLLAFMEERRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECQFDRGGIDPQPIINQVEASTKKKSGKSNSAPSAGSSNSQESFPGGPPSASTPMDGYGGQYPGYPPQPNQPQGGGPGGDNLAASNPFDEPPGPRRPPGYQQGYGYEYGSPYPSNRPVYPPYGPEGDRGYPAGGASGGEYRYGYGAYRGGAPAGTPPPAAPYPEYYRHPHPHPHAPASPHPPVQHPPHQQHQQHQPHQQPPHEVSSQYT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01388248; iTF_01385490;
90% Identity
-
80% Identity
-