Basic Information

Insect: Sesamia nonagrioides
Gene Symbol: -
Assembly: GCA_017933935.1
Location: JADWQK010000831.1:842685-855637[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 8 1.2e+03 1.9 2.3 1 23 199 222 199 222 0.92

2 16 5.4 8.3e+02 2.4 0.1 3 11 261 269 260 273 0.85

3 16 0.046 7 8.9 0.6 2 23 315 337 314 337 0.91

4 16 0.018 2.8 10.2 0.1 2 21 375 394 374 395 0.93

5 16 8.5 1.3e+03 1.8 1.8 1 23 400 422 400 423 0.77

6 16 3.4 5.2e+02 3.0 0.9 1 12 677 688 677 695 0.79

7 16 6 9.1e+02 2.3 2.6 1 23 709 731 709 731 0.88

8 16 0.01 1.6 11.0 0.3 2 23 737 758 736 758 0.96

9 16 0.91 1.4e+02 4.9 1.8 1 23 781 802 781 802 0.88

10 16 1.4 2.1e+02 4.3 7.3 3 23 843 863 842 863 0.95

11 16 0.0013 0.19 13.9 0.3 1 23 878 900 878 900 0.98

12 16 5.6e-07 8.5e-05 24.4 2.7 1 23 906 928 906 928 0.99

13 16 3.6e-05 0.0055 18.7 0.7 3 23 935 955 933 955 0.96

14 16 0.00085 0.13 14.4 1.8 2 23 962 984 961 984 0.96

15 16 0.14 22 7.4 0.1 1 19 991 1009 991 1010 0.86

16 16 8.2e-05 0.012 17.6 1.0 3 23 1023 1044 1022 1044 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	8	1.2e+03	1.9	2.3	1	23	199	222	199	222	0.92
2	16	5.4	8.3e+02	2.4	0.1	3	11	261	269	260	273	0.85
3	16	0.046	7	8.9	0.6	2	23	315	337	314	337	0.91
4	16	0.018	2.8	10.2	0.1	2	21	375	394	374	395	0.93
5	16	8.5	1.3e+03	1.8	1.8	1	23	400	422	400	423	0.77
6	16	3.4	5.2e+02	3.0	0.9	1	12	677	688	677	695	0.79
7	16	6	9.1e+02	2.3	2.6	1	23	709	731	709	731	0.88
8	16	0.01	1.6	11.0	0.3	2	23	737	758	736	758	0.96
9	16	0.91	1.4e+02	4.9	1.8	1	23	781	802	781	802	0.88
10	16	1.4	2.1e+02	4.3	7.3	3	23	843	863	842	863	0.95
11	16	0.0013	0.19	13.9	0.3	1	23	878	900	878	900	0.98
12	16	5.6e-07	8.5e-05	24.4	2.7	1	23	906	928	906	928	0.99
13	16	3.6e-05	0.0055	18.7	0.7	3	23	935	955	933	955	0.96
14	16	0.00085	0.13	14.4	1.8	2	23	962	984	961	984	0.96
15	16	0.14	22	7.4	0.1	1	19	991	1009	991	1010	0.86
16	16	8.2e-05	0.012	17.6	1.0	3	23	1023	1044	1022	1044	0.97

Sequence Information

Coding Sequence: ATGGCGGACACATCAAGAAAAAGATCGAGAAAGTCGAAATTAGTGCCCCGAGAATGTGCAGTTGACGAAGATGATCTTGAATTGCAGGTTTCGGAGCCGAAAGTAGCTAAAGCCGTAAAACAGTCCACCAACAGACAATCAGTTAGTATTGCAACAATATGCCCACCAGAACCAACCTTCTCAAAACCGGAAGAGGTTGATACGAGCGTCCTAAGAAAAATCAATGCAGCAACTAAAGAAGATAAAGAGCCAAAAATAAAGACATCACCCAGAAAATTCGAGATTAACATCGAAGTAGAATCATGTGATGATGACAACGAATTTGAAGAACTTGTTGCACCTAATGTTGATGAAACTACAAGGATCGAACCTATTGAACTTTCTCGAGATATTATTCTGGATGCTGCCGATAATATACTCAAAGATTCACCAAACATTGCCGATAAAATCCTAAGCATATACATTAGGAACACGATCGGGTATGAGTTGAAAAGTGATCTGGTACTAGATTGCCATGAAAAGCGAATACAAAACGCATTGGATGAATGGCGTAGTTGGCAAACTCGTAGTTTTCACAGAGAAGATCCCCTTTTCTACAGATGCTATATCTGtacgaggtcctggtggcattTAGAAGACTTTCGCCAACATTTGTCAACAAGACACCCTGGTGATCTTAGAGTTGCAATAGCCTTGGAGAAATATGAATTGCATGAAGCTAACTTGATAGCTTACAACGAAAGGCTTGTAATCATTAAAGATATATATACAGAAGGTCTTTGCCACCGATGCGGTAAGAATTATAGTGCCCATGAATTGGGATCCAGGTTTCAGGAAAAATATTACAAAGCTGAAGGGTGCACGAAGCAGTTTTTTAGCTGTATGGGTCTAAGAGATCACTTTTCTAGCTGTTCTATGTGTAATACTAAGGATAAGCGTGTCCAATGTGATATATGTAGGTCGAGATTCAGGACAGAACACGAGTTAAATGGTCATTTAGTGTTGTCCCATTCTGTTCGGACTGATATACCAATAATGTCACACTATAGAAACTGCAAACTCTGCTCGGAGAGGTATACCTgtcaatatttacataaatgcgGACAAAAGGGGCCTCATAGTGAGTGTCCTCATTGCCAACAGAGCTTCCCAAATGTCATGGGCTTGGATGTGCATATGTTGAGTGCAAGTAAGCCGTATAAATGTGAAATTTGCCAAGAGGTGATGGAATATAGCTGTAAGAAATATGAACATATGTTGGAGCACACAGAAAAATACATGGTGGTTAGGAGATGTTTAATGTGTGATGGTTTGAACATGTTCTTAAATAATGAAGATGCAGCGGCACATCGGTTTTTTAAACATGAGATCAAAGAAGTGGGACGTCAGTGCTATTTTCCTAAAATGCTAGTACCATCGTCTTGTGTATTTGAACGTTTAGCAGAAGCAGATTGGAATCAACATGAATCAGCtctggaagaagaagaatcagtATTGGAAGCAAAAAAATCCATGCCTGAAGATGAAGAATCAGTCCCAGAAGGACAGACACCATTAAACGGTGGAAAAGAATCTATTTTGGTACGTGAACAGAAGTTACAAGCAGAATTGGATTTAGCTACAACATCCATGCTGGGATCTGTTTCTGTCAAACAAGAACCAGAAGACTCAGAAGATAGCTCAGGGCTTGTAATCAAAGAAGAGCCTCTTGAAGAATTTGAAAGCCAAACGCATGAAGATGAGAATTCTACTGAGAGTAATGGACACGAAATTACTGTCAAAGAAGAATACatagaggaagaagaagaagaggaataTGAAGAAGATATCATCAAACTAAACTTTGATATAGAGGATTTTTTAGTAAAAGAAGAACCAATTCAGGAAGATGATGATTTTGCTATAAAACAAACACAGACTCGAGAATCAGAAAACGATTCAGAAGAACTTTCACAACAATTAAAAGAAGATTCCATGCTAGAACCAGAAGTTATTATTGATGGAGACTGCAAGAAAAAGCAAAGACTATACAGATGTACTAAATGTGGATTCACAGCCAAGCATAGACTTTATAGAAATCACGTCGACTATGACTGTGGAACAAGCCGGATGAAACATAAAACCTATAGGTGcacaaaatgtaaaaatacCTATGGATCcatgaaaaaatatttgacaCACTTCGCAGATCACGGCTACAGACGACTCTCATGCCCTGATTGCCTGAAAGAATACAGCACATACACGCTTTTGGGGACTCACTTACAGCAACACATCAAGCAGAACTTTGTCCGAGTAAAAATGATCACACACGCAGGCAAGACCACATCAAGACCCAAGTTTCAATGCAAAAGATGCGGGAAAATCACTGAACCTAATCATTTCTTTGACCACTGGGAACTGCATGTTAACGCCCAACCTACACATCCTATAAAAGTGATTTCCAGGCCTAATAATAAACCCGGAGAATTGCATGAAACAATTCTAAGGGAATGCATCGaCCACTTATACAAACAGCCGAAGGACTGCAACCATTGTCACCGTAGGTTCAACCGGGTAAACGAGTGCAAACGTCACATCATTGAACATCTACTGCATGATGCTTACAACCACAAACACATCTACAAAGAGTTCAGATGCCAGATCTGTGAACAAGGATTCCCCATACCAGAGAAATATAAACAGCATATGCGGGACCATGCATCGCTGCCCGTCTACAAGTGTGAACTGTGTGACCGTACCTTCAGTGACTCGAGCAACTTTACAAAGCATAAAAAAGTGCATAATTTGAAAGTAATCATCTGTGATTTGTGCGGTAAAAAGTTCCAATCAAAGACGTCTTTGGAAAAACACCTTGAGAAACACCAGGACTCTGAGACGATTACATGCAAGATATGCAACAAAATATTCTATTTCGAAACCTCTTACCGACGCCATGTGAGGTATTTCCACGAGAAGACAATCATAGGCTTCCGCTGCGTTATCTGTGGGGAACGCTTCGACACCCTCAAACTGAAATGGGATCACTTGTGGGAAGTCCATAAGGAAAGAAAGCAAAAAGCAGACTGTCCTATCTGCCACAAGCCCTTCAGGAAGTACTCCGAAGTCCGACGCCACGCAAGAATATACCATATGACGGATATCTCAGTGTTGAATATCAAAAAACATTCTGCAAAATCTCATATAGATCTGAATACGTACTTGAGGGAACCTGCTAAGATAAAACCTGAAATAATTGAAACTTTGGTTGTGTATGATTCTGATTGA
Protein Sequence: MADTSRKRSRKSKLVPRECAVDEDDLELQVSEPKVAKAVKQSTNRQSVSIATICPPEPTFSKPEEVDTSVLRKINAATKEDKEPKIKTSPRKFEINIEVESCDDDNEFEELVAPNVDETTRIEPIELSRDIILDAADNILKDSPNIADKILSIYIRNTIGYELKSDLVLDCHEKRIQNALDEWRSWQTRSFHREDPLFYRCYICTRSWWHLEDFRQHLSTRHPGDLRVAIALEKYELHEANLIAYNERLVIIKDIYTEGLCHRCGKNYSAHELGSRFQEKYYKAEGCTKQFFSCMGLRDHFSSCSMCNTKDKRVQCDICRSRFRTEHELNGHLVLSHSVRTDIPIMSHYRNCKLCSERYTCQYLHKCGQKGPHSECPHCQQSFPNVMGLDVHMLSASKPYKCEICQEVMEYSCKKYEHMLEHTEKYMVVRRCLMCDGLNMFLNNEDAAAHRFFKHEIKEVGRQCYFPKMLVPSSCVFERLAEADWNQHESALEEEESVLEAKKSMPEDEESVPEGQTPLNGGKESILVREQKLQAELDLATTSMLGSVSVKQEPEDSEDSSGLVIKEEPLEEFESQTHEDENSTESNGHEITVKEEYIEEEEEEEYEEDIIKLNFDIEDFLVKEEPIQEDDDFAIKQTQTRESENDSEELSQQLKEDSMLEPEVIIDGDCKKKQRLYRCTKCGFTAKHRLYRNHVDYDCGTSRMKHKTYRCTKCKNTYGSMKKYLTHFADHGYRRLSCPDCLKEYSTYTLLGTHLQQHIKQNFVRVKMITHAGKTTSRPKFQCKRCGKITEPNHFFDHWELHVNAQPTHPIKVISRPNNKPGELHETILRECIDHLYKQPKDCNHCHRRFNRVNECKRHIIEHLLHDAYNHKHIYKEFRCQICEQGFPIPEKYKQHMRDHASLPVYKCELCDRTFSDSSNFTKHKKVHNLKVIICDLCGKKFQSKTSLEKHLEKHQDSETITCKICNKIFYFETSYRRHVRYFHEKTIIGFRCVICGERFDTLKLKWDHLWEVHKERKQKADCPICHKPFRKYSEVRRHARIYHMTDISVLNIKKHSAKSHIDLNTYLREPAKIKPEIIETLVVYDSD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01339523;
90% Identity: -
80% Identity: -