Snon039551.1
Basic Information
- Insect
- Sesamia nonagrioides
- Gene Symbol
- ZFY
- Assembly
- GCA_017933935.1
- Location
- JADWQK010001999.1:185238-207405[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.18 27 7.1 1.0 1 23 91 113 91 113 0.97 2 11 0.17 26 7.1 4.1 1 23 120 142 120 142 0.97 3 11 0.49 75 5.7 1.5 1 15 146 160 146 169 0.82 4 11 3.7e-06 0.00056 21.8 3.6 1 23 174 196 174 197 0.95 5 11 0.0012 0.19 13.9 0.9 2 23 204 225 203 225 0.97 6 11 8.2e-06 0.0012 20.7 0.7 2 23 239 260 238 260 0.97 7 11 0.086 13 8.1 4.3 2 23 265 287 264 287 0.95 8 11 4.7e-05 0.0071 18.3 3.1 2 23 298 320 297 320 0.96 9 11 0.15 22 7.3 1.2 1 23 327 350 327 350 0.93 10 11 0.005 0.75 12.0 0.2 6 23 363 381 363 381 0.95 11 11 0.71 1.1e+02 5.2 0.1 1 10 390 399 390 401 0.91
Sequence Information
- Coding Sequence
- ATGGATGATCTGAAACCAACTTTGCCGTTAAAGAAGAGATTAGAGAAGCGAGTCAAGGAAGAAGATGACGACTACCCAAAGAAAGAAAACTCTGAGGAAAAGAATGACACTGAAGAAAATGAACAGCAAGTGGATAATTCTCAGTCCAAGACGGAAACCCCCTTAATGTACTCCTACGAAACGTTAAGGAATGTAGAAATTGTGACCATCAATGAAGAAGAACGGCAGAAGGAGTACCAGGAAACGTTGAAGTCTCGTCAACACATGCGCCATGTGTGTGTGCACTGCGCGCTCGGCTTCGTTCTCAAGCAGGCGTTTGATATGCATATGAAGGTTCATTCCCCCCAATCAGGCGACCACGAGTGCTTACTCTGCCACTCCCGTCTCAAAACCGCTGACATGTTGTACCGGCATCGCTTACGGCATTACCGCCGTTACCGCTGCCTGCTTTGCCGGACGCGGTTTAAAGATAAAGATACTGCCGCCTGCCACGTCATGAACGATCATGCCGGACAGACCTTCGAGTGTGATCATTGTGGGAGAGGATTCAAAAGACCGCAATACTTGAAGAGGCACGTGGAACAGCACCACACCAAGCCTCACCATCTGGAATGTGGCGTCTGCTTCAGAGTTTTCCACGAGAGGGGCTGGTACCGCTCTCACATCAGGACTCATAACGAGGAGGTAAGGGCGAAGACCGTGCATCTGCCAGTTACCTGCGAGATCTGCTCCCGCGACTACAAGAACAAGGCCAGCTTGAAGCGTCACCTTCTCACTCACGACTCGAATATCCACTGTGAGATCTGTGACGAAAAATGCAAGAATCGGATCACTCTGGGACATCACTACTTGAAGGTGCATAATGAGAAATATGTCGGTGCACTAGAACAGACCTGCCCCCACTGTGACCGGATCTgtgccacgcgcgcgatgcttAAACGACACATACAACGGATGCACAGCGACAGAACGAAGAAGTATCAATGCGATCACTGCCAACGCCTGTACCTCACCAAAGGCGAGGTCCGTTCCCACATTACGTGGTCCCACATGCCGGCGGAGGCCCGCGGGGGCCACGCCTGCCCGTGTGGCCGCATCTTCAGGAGCCCCTCGCTACTGCGTGACCACAAGGCGAGGTTCCATGCGTCTCAGCCACCGCCCAGAGTCCACCAGTGTGAACTTTGCGAAAAGGCTTTTGcggtaatataa
- Protein Sequence
- MDDLKPTLPLKKRLEKRVKEEDDDYPKKENSEEKNDTEENEQQVDNSQSKTETPLMYSYETLRNVEIVTINEEERQKEYQETLKSRQHMRHVCVHCALGFVLKQAFDMHMKVHSPQSGDHECLLCHSRLKTADMLYRHRLRHYRRYRCLLCRTRFKDKDTAACHVMNDHAGQTFECDHCGRGFKRPQYLKRHVEQHHTKPHHLECGVCFRVFHERGWYRSHIRTHNEEVRAKTVHLPVTCEICSRDYKNKASLKRHLLTHDSNIHCEICDEKCKNRITLGHHYLKVHNEKYVGALEQTCPHCDRICATRAMLKRHIQRMHSDRTKKYQCDHCQRLYLTKGEVRSHITWSHMPAEARGGHACPCGRIFRSPSLLRDHKARFHASQPPPRVHQCELCEKAFAVI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00374687;
- 90% Identity
- iTF_00374687;
- 80% Identity
- -