Basic Information

Insect: Sesamia nonagrioides
Gene Symbol: -
Assembly: GCA_017933935.1
Location: JADWQK010000764.1:207894-227128[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 6.6 1e+03 2.1 1.5 6 15 58 67 55 70 0.76

2 9 1.1 1.7e+02 4.6 0.2 1 23 537 559 537 559 0.94

3 9 0.00032 0.049 15.7 1.8 1 23 570 592 570 592 0.96

4 9 0.00014 0.021 16.9 1.6 1 23 598 620 598 620 0.99

5 9 1e-05 0.0016 20.4 2.4 1 23 627 649 627 649 0.99

6 9 2e-06 0.00031 22.6 0.4 1 23 655 677 655 677 0.93

7 9 1.2e-06 0.00018 23.4 0.2 1 23 683 705 683 705 0.97

8 9 4.6e-06 0.0007 21.5 1.9 1 23 711 734 711 734 0.96

9 9 0.064 9.7 8.5 1.4 1 15 740 754 740 757 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	6.6	1e+03	2.1	1.5	6	15	58	67	55	70	0.76
2	9	1.1	1.7e+02	4.6	0.2	1	23	537	559	537	559	0.94
3	9	0.00032	0.049	15.7	1.8	1	23	570	592	570	592	0.96
4	9	0.00014	0.021	16.9	1.6	1	23	598	620	598	620	0.99
5	9	1e-05	0.0016	20.4	2.4	1	23	627	649	627	649	0.99
6	9	2e-06	0.00031	22.6	0.4	1	23	655	677	655	677	0.93
7	9	1.2e-06	0.00018	23.4	0.2	1	23	683	705	683	705	0.97
8	9	4.6e-06	0.0007	21.5	1.9	1	23	711	734	711	734	0.96
9	9	0.064	9.7	8.5	1.4	1	15	740	754	740	757	0.88

Sequence Information

Coding Sequence: ATGAACCAGTGTTGCTTCATCTGCAACAACAGAGCAGGTCTCTCACTAAGAAATGCTTCCAGCCTCTTTGGAGAACATAACACATTGCAATCTGGCAAGAAAGTATCGGATGTTGTGAGCGAGATTGTTGGGAAACCCGTACAAGAAAATAAAGTACATACCAATATACTGTGTAAGAAATGCTTTAAGACATGCTCAGAATATGATAGCATTCAAGTGAGATTACAAACAATAAAAACGGATTTACTAGGGCAATTCAAGTTATCGTTACCTAATCATAATTTAGATTATGAAAACTATGAGCAGAATGTTTGTGCACTGTCGAAAGCTAAACCTCCCTTGGGAAAGAAGTTGGTGTTGCCAGCATCAAAATTACAACCAATACCACCGGATTTGCTGCTCAAAGTGGGGAAATTGGCATCGTTCTCCAAATCTAACATGATTTTACCACAACTTAAGCCCAGCACAGCCTCAACATTAAACCTTAAAGTGACCGTCGGATCATCAGTTTTAACACAAACAATAACAACATCAACGAGTAACTCAATTGAGAAGCCTTTAGACTCAAATTCCATCCTGTCTTCGCTCTCCAACGCCTTGAAAGATGATCTAGACAGTATGGTGACTACTCAGAGTGATATGAACCCTATGAGCCAAAAGAATAACGCAATGTTGAGTTTTAGTGTGAACTCTTTGCCAAAGGATTTTCTTTCAGGCGCCATTTTGAGGAAAATTGAAAAAGATGACGGATATATAAAGGGGGAGGAGACGAATGAGGATCATTCTATGGAGATTGATGAAGATTGTTTGTCTGTGGTTCCTGTAACAACTGCTGATGGTGGAAATTTAGTATTACAAGTTGGAGGACTACAggcTAAATCCGAACCTACTACCGAAGTGAGTGAATACTTAAATCTGCCGTCGCTAGATGGCACTGATGAGGAGAGTGATGCACAGAAGTACATCCTCGGCAAGCTAGAGATCCTCCATGAAGAGGATGAAGATGATGACGACGATGAAGGACACACTATAGTCGTCGATAGTGAAAACGGTTCTATTTTGAGAATGGTGGCCGGACAGAAGTTTATTTACGAGGGCGGAGAGATATCACTGGTGAtgcctgatgatgatgagcagcATGATGGTGACGGTGATCATCTCGAGAATGGTGATAGCCAAGATTCCAATGATGACTCGCAAATAGAGTTACAAGTGTCCGGCGATGAGGAAACTGCGAACGCTATCATTGCAGCAGCTCAGGAACAagGCGGTGCCTTCATCAAAGTGGAGTCGGGCGAGATGTTCCGCGTGAAGTCCGTCTGCAGCACGGCCAGTACGCCCAGCGCCGGGGCCGCCGCGTCCAGTACCGGGGCCCGCACGACCAGTACCGGGGCCCGCACGAACAGTGAGGCCCCCGACGCGGCCAGTTCGGGCAGCACGGATCCAGGCGCGAGCGGGTCACGTCCTGACGCGTCGCTACAGATCGTAGTACAGGAAGGGAACCTGTTCAAGTGCTTGTTGTGCGAGAAGAATGATGAAACCCCTTCCAGTATTGAAGATGCCGACACAATGATGAGTCACTTGAAATCACAGCACGATGCGAGAATATACCTGTGTCGCTTCTGTGGCGCCGTCATGAGGAAACGGACAGAATACGCCTCACATATAGCATCCCACGCGACGCCCCCCTCCTCCCGCGCCGCCCCCCACCGCTGCGCGGTGTGCGGCAAGTGTTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGGGCGAGGCCCTACGTCTGCCAACTGTGCGGGAAGGCCTTCGCCTCCAAGTACACACACCAGGCGCATCTCAAGACACATGGGGTGCGCCCACGTCCCTACAAATGCACTCAATGCGGTAAATCGTTCCTCACCCAGCAGAATCTTAATCAACACGAGAAAACACATTCTGGAATCAAGGATTTCGTTTGTAATATATGTAACAAAGCCTTCAGTACGCAACACAACTTGGAAGTCCACGGCGTGGTACACTCCGGGAACAAGGCGTTTGCGTGCTCCGTCTGCAGCAAGGCCTTCGCCAGGAGAGCAGAGCTCAGGGACCATATGAGGATACACACGGGTGAGCGTCCATTCTCGTGCGACATCTGCGGAGCTCGCTTCACTCAGCGCTCCAACCTCCACTCACATCGCCGCGCGACTCACTTCGACGACAAACGTTACCACTGCGAACTGTGTCCGAAGAAGTTCAAACGGAGAAGGTACGTCAAAACATCCAGAATAGGGTATTACGcactatga
Protein Sequence: MNQCCFICNNRAGLSLRNASSLFGEHNTLQSGKKVSDVVSEIVGKPVQENKVHTNILCKKCFKTCSEYDSIQVRLQTIKTDLLGQFKLSLPNHNLDYENYEQNVCALSKAKPPLGKKLVLPASKLQPIPPDLLLKVGKLASFSKSNMILPQLKPSTASTLNLKVTVGSSVLTQTITTSTSNSIEKPLDSNSILSSLSNALKDDLDSMVTTQSDMNPMSQKNNAMLSFSVNSLPKDFLSGAILRKIEKDDGYIKGEETNEDHSMEIDEDCLSVVPVTTADGGNLVLQVGGLQAKSEPTTEVSEYLNLPSLDGTDEESDAQKYILGKLEILHEEDEDDDDDEGHTIVVDSENGSILRMVAGQKFIYEGGEISLVMPDDDEQHDGDGDHLENGDSQDSNDDSQIELQVSGDEETANAIIAAAQEQGGAFIKVESGEMFRVKSVCSTASTPSAGAAASSTGARTTSTGARTNSEAPDAASSGSTDPGASGSRPDASLQIVVQEGNLFKCLLCEKNDETPSSIEDADTMMSHLKSQHDARIYLCRFCGAVMRKRTEYASHIASHATPPSSRAAPHRCAVCGKCYSSRTLLAEHANLHSGARPYVCQLCGKAFASKYTHQAHLKTHGVRPRPYKCTQCGKSFLTQQNLNQHEKTHSGIKDFVCNICNKAFSTQHNLEVHGVVHSGNKAFACSVCSKAFARRAELRDHMRIHTGERPFSCDICGARFTQRSNLHSHRRATHFDDKRYHCELCPKKFKRRRYVKTSRIGYYAL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -