Basic Information

Insect: Sesamia nonagrioides
Gene Symbol: ZNF280A
Assembly: GCA_017933935.1
Location: JADWQK010001689.1:371792-384452[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00051 0.077 15.1 0.9 3 23 231 252 230 252 0.96

2 10 0.069 10 8.4 0.2 2 23 278 300 277 300 0.95

3 10 0.017 2.6 10.3 0.5 2 23 324 345 323 345 0.95

4 10 3.1e-06 0.00047 22.1 1.6 1 23 349 371 349 371 0.98

5 10 0.12 18 7.7 1.2 1 13 376 388 376 390 0.91

6 10 0.001 0.15 14.1 1.4 2 23 408 430 407 430 0.95

7 10 4.4e-07 6.6e-05 24.7 1.4 1 23 437 460 437 460 0.98

8 10 0.0057 0.86 11.8 0.7 1 23 466 488 466 488 0.96

9 10 2.9e-06 0.00044 22.1 0.9 1 23 494 516 494 516 0.99

10 10 0.00045 0.069 15.2 1.1 1 23 522 545 522 545 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00051	0.077	15.1	0.9	3	23	231	252	230	252	0.96
2	10	0.069	10	8.4	0.2	2	23	278	300	277	300	0.95
3	10	0.017	2.6	10.3	0.5	2	23	324	345	323	345	0.95
4	10	3.1e-06	0.00047	22.1	1.6	1	23	349	371	349	371	0.98
5	10	0.12	18	7.7	1.2	1	13	376	388	376	390	0.91
6	10	0.001	0.15	14.1	1.4	2	23	408	430	407	430	0.95
7	10	4.4e-07	6.6e-05	24.7	1.4	1	23	437	460	437	460	0.98
8	10	0.0057	0.86	11.8	0.7	1	23	466	488	466	488	0.96
9	10	2.9e-06	0.00044	22.1	0.9	1	23	494	516	494	516	0.99
10	10	0.00045	0.069	15.2	1.1	1	23	522	545	522	545	0.97

Sequence Information

Coding Sequence: ATGTCGCAAGGCATCGTTTGTCGCTGTTGCCTCGTGAGAGCTCCTGATAAAAACTTGAAGACTCAATATTCAATACTGGACAAGTCTGAAGTTTACGCCGATATGTTAAAAGAATGTTTCGAAATTCAGATATTCCTGGGTGACAATGATGGTGGTATTTGTGAAGTTTGTATTACTAGATTGCGGGATGCCTGTAACTTTAAAGAACAAGTACTACAATGTCAGAAGGAATTTATGGCTAAACTTGAGGATTATAATGTTGCAGATGGCCCAAAAGTGAAGGAAGAATTTCTTGAAGATTTGGACGACGACAATGGAATATATTTTCTAGAATTAAAAGAAGAAATGTCAGATGATTTCGACGATTTTAAAGACGAGGATGACAACACGAAACTGGCCGAAATGCTCGGTTTTAATGACGTCACGATGAAGAAGAGATCCGAGAAAAGAAGGAGCAAGAAGCGGCTGCTTCTTGAAAATGGTGGAAAAGAACTGAAATCAAAAAGCCGTGGTATGAAGATTTCTCGCTTTCACACCCTCACACAGAAGATCCTGAAGCCTGTCAAGatatcttCCGGCACCGGCAAACGCATGATGAGCGACGCGTCCAAAAACAGAGTGAACGTGGACATGCTGCTGAAATACTCCAACTGCACGCCATTCGCGAACAAGACTATTGCAGGCATCCTCTGCGCCTACTGCAAGACAACCTACCGAGATCTACCTCATCTGCGTACACACATACGCGAAGTACACACCAACGACCATCTCATAGAGACCAAACGATTGGACAAAAACAACCTATCCCTCAAAATGGACATCACAGACTTACGATGCAATCTCTGCAACGCAAGCGCAGATACCATAACCAATTTAAAAGACCACTTGACTATGCAACATGACGTCAAATTTTATCCCGACGTTAACGACTACGTACTAGAGTTCAAACTAACGGACGGCGAAATTTTAAACTGCGCACTCTGCAATTCCACTTTCGAAACCTTCAAGATGCTGCTCCAACACATGAACGGCCATTACAGAAACTTTATCTGCGAAATATGCGATCTGGGCTTCATAAATCAACACAAACTAAGAAACCACCAACGGACACACGAAGTCGGGAATTTCAACTGTTCTTTTTGCGACAAAATGTTTAGCACTCGGGTCAGGAAGCTATGCCATGAGAAGTATACCCATAACCCCACCGCGAGATACACGACAAGCTGTCCCCATTGCGAGGAATCCTTCACGAGTTATTACAGAAGAAACCGCCATATGGCGGTAGAACACAACGTGTCTGCGGCCACTTACAAGTGCAATATCTGCGACAAATCTTTCATTCTAAAATCGAAACTGACTTCTCATATAAAGAAGGTCCACTTAATGGAACGGAATCATATCTGCCAGGAGTGTGGTCAAGGATTTTTCATAAAACAATCATTAGACGAACATATGATCAAGCATaacggagaacgggtcttcaAATGCACGGTCTGTGCTAAAGCTTACGCCAGAAAAAAGACTTTAAGGGAACATATGAGGATTCATAATAATGACAGGAGATTTAAGTGTGGGGTTTGTGCTGTGGCGTTTGTGCAGAAGTGTAGTTTAAAGAGTCATATGCTTTCCAACCATGGGGTTACGTTAGCGGAGTATGAGAGTGGAAGACGAGAGGTTTGTAGTCCTTAA
Protein Sequence: MSQGIVCRCCLVRAPDKNLKTQYSILDKSEVYADMLKECFEIQIFLGDNDGGICEVCITRLRDACNFKEQVLQCQKEFMAKLEDYNVADGPKVKEEFLEDLDDDNGIYFLELKEEMSDDFDDFKDEDDNTKLAEMLGFNDVTMKKRSEKRRSKKRLLLENGGKELKSKSRGMKISRFHTLTQKILKPVKISSGTGKRMMSDASKNRVNVDMLLKYSNCTPFANKTIAGILCAYCKTTYRDLPHLRTHIREVHTNDHLIETKRLDKNNLSLKMDITDLRCNLCNASADTITNLKDHLTMQHDVKFYPDVNDYVLEFKLTDGEILNCALCNSTFETFKMLLQHMNGHYRNFICEICDLGFINQHKLRNHQRTHEVGNFNCSFCDKMFSTRVRKLCHEKYTHNPTARYTTSCPHCEESFTSYYRRNRHMAVEHNVSAATYKCNICDKSFILKSKLTSHIKKVHLMERNHICQECGQGFFIKQSLDEHMIKHNGERVFKCTVCAKAYARKKTLREHMRIHNNDRRFKCGVCAVAFVQKCSLKSHMLSNHGVTLAEYESGRREVCSP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00449560;
90% Identity: iTF_00238089;
80% Identity: -