Snon000990.1
Basic Information
- Insect
- Sesamia nonagrioides
- Gene Symbol
- TIGD1
- Assembly
- GCA_017933935.1
- Location
- JADWQK010000028.1:65207-67090[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-07 9.8e-05 23.6 0.0 2 45 11 54 10 54 0.95
Sequence Information
- Coding Sequence
- ATGATAAAAAGGAAATATTATTCTTGGAGTAAAGAAGATATGGAAGAAGCAATTAGAAAATATAACAATGGGGACTTAAAATTCAACGAAGTTTGTCGTGTATTTAAAATACCGAAACCGACATTTAGACGACATTTAAAAGGCTTGAATACACGTAAAAGAATTGGACGCCCGAGTGATTTAACGGAGGAAATGGAAGCAGAACTAGTCAGACATGTTCTTTTGTTGGAGTCTAGATTTTTTGGCTTGACCATTACGGATTTACGGCACTTAGCTTATCAGTTAGCAGAAAAATACGGACTGAAACACAGATTCAATAATGAATCGCAACTAGCTGGTTGGAAATGGTATTATACATTTATGAAGAATCATCCAGAAATATCCTTACGAACTCCAGAACCTACGTCTATGGCTCGCTGTAAAGGATTCAACAAAGAAACGGTGATGGCGTTCTTTGATAAATATGAGTCCATCTTAGACGAAGGTCAATTTACAGCcgaaaaaatttataatatggaTGAGACAGGTTTAAGCACTGTTCATAAGCCTTCAAAAATTTTGGCTCAAAAAGGGAAACACCAGGTTGGAGCTGTCACTAGCGGTGAACGTGGTGTTAACACAACATGTATTTGTTGTATGAACGCAGCTGGAGAATTTGTGCCTCCCATGCTTATATTTAAACGCAAAAGGATGACAGAGAGCTTGATGTGTGGAGGTCCACCGAATACTTTGTATGAATGTTCAGAAAGCGGATGGATTGTCAGCATCTTATTTACCAAGTGGcttaaacattttataaaatgtcTAAGGCTGCAAAAATCACAAGAAAATCAAATTCTTCTCATCCTAGATGGTCATTCGACGCACACGAAGAATATTGATGCAATTAATCTCGCTAGGGACTATGGAATTATTATGTTATCTCTTCCGGCCCATACAACACACAAGTTGCAACCATTAGATAGGTCATTTTTCAAAACTCTAAAACAGAATTTTAACGCTGCTTGCATTTCATGGATGCGAAACCACCCTGGATCTaccataaaacaaacaaatattgcAGAAATTTTGAAAGAGGCTTATCTTCGAGCAGTTTGTATGGAAATAGGTATACATGGCTTCGGGTGTTGCGGTTTATGGCCTTGTAATCGCTATAAGATTAGGGATGAGGAATATGTCGTACTTGAAGAAGCTAATCTAAGTCTTCCAGAATCTCCCCACTCTGAATTGGCTGAAATCTCCCAGAATTTAACAACTGAAATACAACAAGAAACAACAAAGGCTTTCACGGGTGTGCCAAAATCTAACGAGATTTCTGTGCAAGAACAGACTGAGGAAGCTATGTCCCCAAATCTTCCTGGGACTTCGAAAATCCACCCTTTGGAACAGAAAACTCAATGTCTAGAAGAGAAAAAGGAAGAATGTTCTTCAGATACAAACATAGAGGATTTTACAGCACAGTCAATTAGAACTACGCTGGAAACTATATCTCCGTTACGTGCTATTCCTGGAAATTCGAAACCAATGAAAAGAAAAACTACAGGTGCTATTGTTATTACAGAGAGTCCTTATAAAAAAGAGCTCGAGGGTAAAATAGAAGAgtcgaagaagaagaatgtatcAAAAAATCTAAGTGCTATGAAAAGTAAAACTACTACTAGTAAGACATCACAAaaggaaaataagaaaaagaaagaagaacaagATAAAAATGGCAGTTGGTACTGCACATTATGTCAAGAAGACATAAAAGAAACCATGATCCAGTGCACACAATGTGAGACGTGGGTACATGAACTTTGTGCAggaactaataaaaaaaccaaagagTATAACTGCGATGATTGCCGAGAATTGGCGAAGACCATCCGTCGAATTTGTTAA
- Protein Sequence
- MIKRKYYSWSKEDMEEAIRKYNNGDLKFNEVCRVFKIPKPTFRRHLKGLNTRKRIGRPSDLTEEMEAELVRHVLLLESRFFGLTITDLRHLAYQLAEKYGLKHRFNNESQLAGWKWYYTFMKNHPEISLRTPEPTSMARCKGFNKETVMAFFDKYESILDEGQFTAEKIYNMDETGLSTVHKPSKILAQKGKHQVGAVTSGERGVNTTCICCMNAAGEFVPPMLIFKRKRMTESLMCGGPPNTLYECSESGWIVSILFTKWLKHFIKCLRLQKSQENQILLILDGHSTHTKNIDAINLARDYGIIMLSLPAHTTHKLQPLDRSFFKTLKQNFNAACISWMRNHPGSTIKQTNIAEILKEAYLRAVCMEIGIHGFGCCGLWPCNRYKIRDEEYVVLEEANLSLPESPHSELAEISQNLTTEIQQETTKAFTGVPKSNEISVQEQTEEAMSPNLPGTSKIHPLEQKTQCLEEKKEECSSDTNIEDFTAQSIRTTLETISPLRAIPGNSKPMKRKTTGAIVITESPYKKELEGKIEESKKKNVSKNLSAMKSKTTTSKTSQKENKKKKEEQDKNGSWYCTLCQEDIKETMIQCTQCETWVHELCAGTNKKTKEYNCDDCRELAKTIRRIC*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00667395;
- 90% Identity
- iTF_00667395;
- 80% Identity
- -