Snon010912.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sesamia nonagrioides
Gene Symbol
ct
Assembly
GCA_017933935.1
Location
JADWQK010000551.1:10591535-10625013[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.1e-27 9e-23 81.7 0.0 3 70 210 278 208 284 0.94
2 3 3.6e-32 1e-27 97.5 0.0 4 77 609 683 607 685 0.96
3 3 5.2e-31 1.5e-26 93.8 0.0 3 75 811 884 809 888 0.95

Sequence Information

Coding Sequence
ATGTTGCAAGAAGCAGAACTATGTAGTTTGACAACAGATATTGCCCAACTAGTGGACGACGTGCGTCGCCTCCAAGCATCGCTTACAGCGCTGCAGGAAGCGCACGCGCAGCAACTGCAGCGGCTAGAAGAGAGATTGGATGAGAAGAAGCAACACATCGCCAGGCTTGAAGCGAGGCTCGACACGCAAAGAGACTATGATGATGTCAAAAGAGAAATCAGCATGCTCCGAGCACTCGACCTGGGCGGTGGCGAGCGATCTTTAGAGCGCAAGCCTGAGATCCGCTCACCGAGCACCGCACCTTCTCTCCGAGATCATTCAGCCGAGCGAGAGCGAAGCGCTGAGCGCCGGGATACAGGTGTGGAGGAGTGGCCCAGCACGCCGCCGCCGCTCAACAACAACACCACTCACCACAACAACAACGGCCCCACGCCGCTGTTGCCGCTGCCGCCACCGAGCCCCTTCCGCTTCGAGGAGCACCGCACCTACAGGTTCGCAGAGGACATGGGGCCCCTGCCGCCCGGCGCTCTGGTCGGACGCCTCGGTGATTCCCTCATCCCCAAAGGCGACCCCATGGAGGCGCGACTGCAGGAGATGCTGAGATACAACATCGACAAATATGCGAATACGAACCTGGACACGTTGCACATAAGCCGGAGAGTGCGAGAGCTGCTGTCGGTGCACAACATTGGACAGAGACTGTTCGCTAAGTACGTGCTGGGGCTGTCTCAAGGGACGGTGTCGGAGCTCCTATCGAAGCCGAAACCCTGGGACAAGCTGACGGAGAAAGGGCGGGACTCGTACAGGAAGATGCACGCGTGGGCTTGCGACGAGGCCGCCATCATGCTGCTCAAGTCACTGATCCCTAAAAAAGttgGGACAAAGGATGGCACCGGCACAGTGTTTGGCCGGCCGGAGGGCGAGGGCGACGACAGGCTCACGCATGCGATCTTGAGTGAAGCGCATCTGATGAAGACGCCCAGCGGACCTCCCCACAACGATGACTCCAGAAGCAATGAGGACTCTAGCTCACCGAGGACTCAGTGTCCTTCACCTTTCTCCAATAAGGATGGGAGTCAAAATCGAAGACTCAAGAAGTACGAGAACGACGACATTCCTCAAGAAAAGGTGGCGCGCATATACCAGGAAGAACTTGCCAAAATCATGACCAGGAGAGTAGAGGATATTCGCCGTGATGGTTTCCCTGGCATGTTTCCTCCTTTTTTCAGTGGCGGCATGCCTCCTCACATGGAGAGGCCCCCGGAAGATATTCGTATGGCCCTAGAAGCCTACCATAGAGAACTCGCTAAGATCCAGCCAGGCGGCAACATTCCCAATCTCCATAACTTGCCCACCATGCCGCCCTTTCCGAACCTCCTCGCATTGCAGCAGCAAGCGATGCAACAAGCACAGAATCAACAGATGAACGGCTCAGGTGCGGTCCAAGATCTCTCTTTGCCTAAAGATAAAAACGCCAAAATGAATGGAATGACTGATAGTGATAAGGATAGGACAATGGATGCCGAAGAGGCTATTAGGCACGCGGGGAGCGCATTCTCGTTAGTAAGGCCAAAACTAGAACCGGGACAGCAATCAACAGGATCGTCCGCATCCAGTCCACTGGGGAACGCGATTCTACCACCCGCAATTACTCCGAATGAGGACTTCAGCAACTCAGCAGCAGCAAGCCCACTACAGAGGATGGCTTCGATCACAAACAGTCTTATCTCCCAGCCGTCAAATCCTCCTCACCATCCACCTGTACAGAGGTCGATGAAAGCAGTTCTTCCACCAATCACACAGCAACAATTTGATCTCTTTAATAACTTGAATACGGAAGATATCGTGAGGAGAGTAAAAGAGGCTCTGAGCCAATACTCCATTAGTCAAAGACTTTTTGGAGAATCCGTCCTTGGTCTATCGCAAGGATCCGTGAGTGACCTGCTAGCGAGGCCAAAGCCCTGGCACATGCTCACGCAAAAGGGACGAGAACCTTTCATCCGCATGAAGATGTTCTTGGAGGACGATAATGCTGTCCACAAGCTGGTAGCATCACAGTACAAAATCGCGCCGGAAAAACTAATGAGGACCGGGAACTACAGCGGAGCACCTCCATGTCCGCCAAATATGAACAAACCCATGCCGCCAACACAGAAGATGATTTCTGACGCGACCTCCCTGCTGAGCAAGATGCAGCATGAGCAGCTCCTGAGTGCCGGTCACCTAGGCCACCTGGGTCAGCCCACGCCGCTGCTGCTGACGCCGCCCGGCTTCCCACCGCACCACGCCGTGACGCTGCCGCCACAGCACCACGACAACAACAACAAGGAGCGcaagccgccgccgccgcagccACACCACCAGCCGCCCGTCATGCGCAACCTGCCCCAGCACATATCACCGAGCGTCTACGAGATGGCTGCGCTCACCCAAGACCTAGACACACAAACCATTACGACCAAAATAAAGGAAGCGCTACTGGCTAATAACATTGGCCAGAAAATCTTCGGTGAAGCTGTCCTAGGTCTATCACAAGGCTCTGTCAGTGAATTGTTATCAAAACCGAAACCCTGGCATATGCTCAGCATCAAGGGTAGGGAACCATTCATACGCATGCAGCTGTGGTTAAGCGATGCCCATAATATTGATCGCTTGCAGGCTTTAAAGAATGAGCGACGAGAAGCGAGTAAACGACGACGGTCAAGTGGCCCTGGACAAGATAACTCGTCTGACACATCGTCAAATGATACGTCGGAGTTTTACCACTCGAGTTCGCCAGGCCCTACTGCGGGAGCGCCCTGTGCCAAGAAACAACGAGTACTGTTCTCTGAAGAGCAGAAGGAGGCACTTAGATTAGCATTTGCACTCGACCCTTACCCAAACATGCCAACGATCGAATTTCTCGCCGCAGAATTGGGTTTATCATCGCGAACCATCACTAACTGGTTCCATAACCACCGCATGCGGCTAAAACAACAAGCACCTCATGGCTTGCCGGCCGAACCTCCCGCGCGGGATCAATCCTCAGCACCTTTCGACCCAGTCCAGTTCCGTCTTCTTCTCAATCAGAGATTACTGGAACTTCAGAAAGAGAGGATGGGGCTCGCTGGCGTACCCCTACCGTATCCACCATATTTTGCAGCCAACTCCAACTTAGCGGCATTAATTGGCCGCGGGCTAATACCCCCTGATGACCAGGTCAAGGACCAGTCCGGCGGTCTCGACCTTTCGATGCCGCTGAAACGAGAACCCGATGGTGATGATTTTGAGGACGATGACGGTGAGAGTAACCTCGGCTCCGAGGACTCGTTGGACGAGGAATCTAAGACTGAGCCGAAGGCGGCTTCGACGCCACACGCCGCAGGTCGGTCTAGCAGACGAAAGCCTGCAGCGCCGCAATGGGTCAACCCTGACTGGCAGGATGAGAAACCGCGTAACCCTGACGAAGTGATAATTAATGGAGTGTGTGTGATGCGAAGTGATGACTTCCGGAGAGAGGCGGAGGAGACGGTGCGTGTGGAGCCGTCGCCGGTGGCCCGCGAGGGATCGCCGGCGGAGTCGCCCGCGCCGCGCACGCCGCACACGCCTCACACGCCGCACACGCCGCACACGCCGCACACGCCACGCCCGCCACACACACCTGACGATGTGATCCCCGAAGACAAAATCAAATCCGAGACCGACGACGGCTGGGAGTACTAA
Protein Sequence
MLQEAELCSLTTDIAQLVDDVRRLQASLTALQEAHAQQLQRLEERLDEKKQHIARLEARLDTQRDYDDVKREISMLRALDLGGGERSLERKPEIRSPSTAPSLRDHSAERERSAERRDTGVEEWPSTPPPLNNNTTHHNNNGPTPLLPLPPPSPFRFEEHRTYRFAEDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNIDKYANTNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAIMLLKSLIPKKVGTKDGTGTVFGRPEGEGDDRLTHAILSEAHLMKTPSGPPHNDDSRSNEDSSSPRTQCPSPFSNKDGSQNRRLKKYENDDIPQEKVARIYQEELAKIMTRRVEDIRRDGFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNLHNLPTMPPFPNLLALQQQAMQQAQNQQMNGSGAVQDLSLPKDKNAKMNGMTDSDKDRTMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNEDFSNSAAASPLQRMASITNSLISQPSNPPHHPPVQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMNKPMPPTQKMISDATSLLSKMQHEQLLSAGHLGHLGQPTPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPPPPQPHHQPPVMRNLPQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREASKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTAGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSSRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLIPPDDQVKDQSGGLDLSMPLKREPDGDDFEDDDGESNLGSEDSLDEESKTEPKAASTPHAAGRSSRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRREAEETVRVEPSPVAREGSPAESPAPRTPHTPHTPHTPHTPHTPRPPHTPDDVIPEDKIKSETDDGWEY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01338275;
90% Identity
iTF_00445005;
80% Identity
iTF_01339903;