Basic Information

Gene Symbol
ARID5B
Assembly
GCA_017933935.1
Location
JADWQK010000358.1:29349-46956[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-15 8.3e-12 47.0 0.0 3 89 241 314 239 314 0.90

Sequence Information

Coding Sequence
ATGCCGTCTGTAATTGCGACAATGAGACACAATTTAAATCATATCTCTTCCTCTTTCCAGGACGAAGTCCTCGCCATTAGCGACAAGGTGGTCCTCCGCGCTGATGACCTGCTCTCCTGGATGTGTGTGGGCACCGAATGGCGCTGGGGGCTGAGGGCCGTGTGGCGCGGCGCCTGCGCACCGCCCACCGACCAGCCGCGCCACGCACCTCTCACGCACACCAAACTGGACTTTACTGACGTTGATTCCGAGAAGAGTACCATTGTGGTCGACGAAGATGCTCCCGGCGTAGTAGTCTTCTCCTACCCGAGGTACTGTCGCTACCGGGCGCTGATAGCCAGGCTTGAAGGCATCCAGGCCTCATGGCTGCGAGACTCGTTGGTGGCAGCTTTAGGGGGATACGCGGCCCCGACTAGCAACACCAGGATACTGTACTGTAAGGACACATTCGAGTATCCTGAGCTGGAGGGTCATGAGTTCGTGTGCAACCACCTCGCGCCGCGCCTCAAGGGCCGGCCGCGCGGACGTCGGCGACGAGCTCACACGCCGGACCACGCGCCGCCCGACGAGCGCGCCTCCGACAGGTCCGACTCCGACGACCCCCCACAACATACCACTGACCCGCCGACCCGTCGCCGCTTGTCCCTCCGCAACGGCGCCCCCCCTCCCAGCGACGACGACGAGGAGGAATACAAGAGGATAGAACAGACCCCAGAGGACAGAGCCTTCCTCCAGGCGCTCAAGATGTTCTACAAGAGCAGGAGTGAACCTTTCAAGAGTGGACACACTCTGAAGCATTTGTCTCTCCGCGCGCTGTACATGTCGGTGATGTCTCGCGGCGGGTACGACGCGGTGTGCCGCCACAAACTGTGGCGCGCGCTGGCTCGCGACCAGCCGGCGCGAACGCGACGCCACTACGAGAGATATCTTCTCCCCTTCGAGAACCACGAGCGACGCAACGGCTCGTCGTTCAAACTGAACGGCAAGCTGGACGCGGAACCACGCACCATCGCCACCATTGATGTCACGGACTCGCCGCGCGCGGAACCACGCTCGCCCACGCCGGGCTGCGACACCCGACCAGCTCCAGACACCGTCGACAGCGAGACGGGAGAGATCACCACCAAAGATGAAATTATAGTCAAAAACGCCGAAGAACTAAATAGAGAATTCTTAGACTCTCTGGCAAAAGAGGAGAAAACGGTCAAAATCTCCGTTAAACCAGTCGAGAGTCTTATCGAACCGGTTAAGCCTCTTGAGAGCTCGGATGTCCCCAAGTTGGAGGCACCGAAGGAGGAGGGGAGGGATTTTAGTCGGAATTATTTGAGTGATATGCAAAAATTTAGTATGGGTCCGGAGGGGATCTCGTCGCATGCGACGCCTCTCAACGGTCACGCTGCGCCTGCGCCGACTGATCTCGGTTTGCGACGCACATTGGCGGGACGCAGCTCCCTCCGCGCGGTGCGCGTCAAGCCAGCCAGACCTCACGCGCATGCCGCCGCGCCGCCCCCGCTGCGGTCCGAGTCGGTCCCGGTGTCGCCGCCGGTCACCAACTTCGGCATCCACCACCCGCAGCCGCCGGTGCAGCAGGACGACGACATCGTGGAGGTCCCCTACAAACCGAAAACTCCAGAAATTATCGACTTGGACGAGTACCCAGAGAGCCCCCAAGCAGTCAAAAAGAAGAAACTGGATATCCTCAAGGAGCGAGGCCTCGAAGTCACCGCCTTGCCGGCCCCCTGGCAGGGCGTGGCGCCCCACATCATGGCTCCTCCCATGCTCCTCAACCCGGCAGTACAGCACCAGATCATGTCACAAGCACAACTCTTCCAAATGTACAACATCATCCCACAGAACTATGCCAACGGGGTACAGCCTCCGAAGGTGATCCAAGCGTCTTCTATCTTCGGTAACACAGGACCTGAGAAGACTGTCTATGGCAACCCTAAGGATCCCTTCATGCCGCCTCCTCATGTTCTTCACGGAGTGCCAGTCAAGCCTTTGAAGACTGCCCCACCTGCTACCATTCCTCAGGATATACTAGACCTGACGTGCAAGTCTTCAAGCCCCCCTCCGCAGAAGCCAGCCGTCGAGATAGTAAGAGTACCCCCCTCCCCGTCGCCGTCCCCAACGGCACAGAACTTAACAAAGAATTACACTTTAGTAGACGGGAAAGCAGTGGTCGGCTCGAATTTAGAAATTACTTTAGTCAATAAAGCTATGAGTCCTGGCAAGAACCGGCAGCCGCAGAAGAGGTCCAGCAACGGGAAGTTCATGTCAGCTAAAACGCCAACCCCGCCTAAGGAGCCCTACCCCAAATACACGTCTCCAACCACCACGACCCAGAAGAAACCACCTATTAACATCCCCAACTACCAAATCAGAGAGGATTCCTCTCCTACCCAAAGCCACGTTCTGCAAAACGCCATGAAAAATCAAAACCTAGCTCATATAATGGATTTGCAGAAGAACTCAGTTCCTATGACGTCGTTCATGGACCCGTACGTGGCGCTATACAGCAGTCTAGCCGGTCAGATGGACCAGAGGCAGCTGGCTATGTACCGGGATCTAATGACGAATCAGTTCCGATACCCAGGGCTGCTGAACCTTGGTGTGGGGACGCCGACAACGAAGAATTAG
Protein Sequence
MPSVIATMRHNLNHISSSFQDEVLAISDKVVLRADDLLSWMCVGTEWRWGLRAVWRGACAPPTDQPRHAPLTHTKLDFTDVDSEKSTIVVDEDAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTSNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAHTPDHAPPDERASDRSDSDDPPQHTTDPPTRRRLSLRNGAPPPSDDDEEEYKRIEQTPEDRAFLQALKMFYKSRSEPFKSGHTLKHLSLRALYMSVMSRGGYDAVCRHKLWRALARDQPARTRRHYERYLLPFENHERRNGSSFKLNGKLDAEPRTIATIDVTDSPRAEPRSPTPGCDTRPAPDTVDSETGEITTKDEIIVKNAEELNREFLDSLAKEEKTVKISVKPVESLIEPVKPLESSDVPKLEAPKEEGRDFSRNYLSDMQKFSMGPEGISSHATPLNGHAAPAPTDLGLRRTLAGRSSLRAVRVKPARPHAHAAAPPPLRSESVPVSPPVTNFGIHHPQPPVQQDDDIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPAPWQGVAPHIMAPPMLLNPAVQHQIMSQAQLFQMYNIIPQNYANGVQPPKVIQASSIFGNTGPEKTVYGNPKDPFMPPPHVLHGVPVKPLKTAPPATIPQDILDLTCKSSSPPPQKPAVEIVRVPPSPSPSPTAQNLTKNYTLVDGKAVVGSNLEITLVNKAMSPGKNRQPQKRSSNGKFMSAKTPTPPKEPYPKYTSPTTTTQKKPPINIPNYQIREDSSPTQSHVLQNAMKNQNLAHIMDLQKNSVPMTSFMDPYVALYSSLAGQMDQRQLAMYRDLMTNQFRYPGLLNLGVGTPTTKN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00374957;
90% Identity
-
80% Identity
-