Snon046309.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sesamia nonagrioides
Gene Symbol
Arid2
Assembly
GCA_017933935.1
Location
JADWQK010002276.1:2579072-2610292[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.3e-20 1.7e-16 62.0 0.0 2 89 17 101 16 101 0.94
2 2 6.7 3.5e+04 -3.1 0.1 52 68 879 895 872 905 0.65

Sequence Information

Coding Sequence
ATGGCAAAAgcacaaataaatacaaaatctaGCAACTATATAAAGGACCGGGAAGTTTTTATTAAGGAGTTGAAGCAATTCAACGAGAGTAAAAAtttgcCCACAAAAGTGCCAATAGTAAATGGCATAGAAATAGATCTTTATTTGTTCTACACATTGGTTCAACAGCGAGGGGGACTCGGCAAGGTAAATCAGAATGATACGTGGGAGTCATTCTTGCGACCGCTGAGACTACCACATCCATGTATCAATGGATCCACACTGCTTAGAAGAATATATGGAACATATTTGGAAAAgtatgagAGAGCCAAAGGCCCACCAGGCAGGGATGATGACAACGACATGGATGAAGACCCGCGGCGCGGTCGAGGTGGTGCCACGCCACGCACGAACTTTGGAGGGGGTACGTACGTCTCAGCATCAGGTGAGACGCTCCGCACCGGCGGCGCCCGCGTCGCCCCAGCATCGGAGCGATTGGCCCTCTCGCTCTTATCGCCGATGCCGAACGAGCAGGACTTTGCAGTCAACGTATGTACCGTGCTGGCTGCGGACCATTCGAACAGGCTGCCGCTGAGTACCACGCCGCATATATTGGATTTCTTATTGGCGCATGCTGGGGTTTATAATCATTCGAGTCTCCGCAATACAATCGGCCGTTCCTACTTCGAAGCGCGAGGTCGTTACCCCGATGACTTCTGGAGACTTCGGGCCGGAGGGGGCGGGGCTAAAGAGTTAGCTGACGAGACCAAGTTTATGCAGCCAGGGGTCGAACAACCAGACCTCATAGTTCAGGCTAGGGCGGCATATAATACTCTAACTGATTGTTTGCTGAATGGCTCGGAAGAAGAGGAGATGGTTATTGAGAAGGTTTATGAGGAGGAAGTATTAGAAGACTGGATGGCAGACCCACCGGATGAGAACCAACTCTTCGCTCCAGAACTACCAGGGGGCGCTGCTTGTGTTTACACGCAGCGAGTGTTGCAGATCGCCTCCATAGTTCGCTCGCTCTCGTTCCACGATGAGAACGTGCAGTATTTAGCTAAGAATTCTACGCTTATCAGGTTTTTATTGTTATGTGCAAACTCTTGGGTGGGCACACTACGGCAATCTGGTCTTGATACTCTCGGCAATGTATCCACTGAACTTATAATCAAGGATCCAGCGACATGTTTGATATCCCGGCACGTGCTATCCACAATTCAATCAGCATTAATATCTCAGGACCGCGCTAGAGTGCTTGCAGCGCTTGAGTTGCTTAACAAACTCGCTCAGAATGAGGTCAATGAAGATGCACTGCTTAAAGCGCTGGAGTCTAAGCTATATCACGAAGTGTGCGCTCTACTGACTCTCCGCGATATAATGGTGCTGGTGTGTACGTTGGAGTGCGTGTACGCGCTGACGTCACTGGGGGACCGCGCCAGCGAGTCCGTCGCCAGGGTGCCCGGCCTCATACACACGCTGGTGTCGCTCGTCACTGTCGAGgcTCAAAGCTACGGTCCTCGGGCTTGTATACTTATGCGAGTCGTAGAAACGGTGAGTGGACCGAGTGCGATCGCCGCGCAGGCAGAACGTGATGCGCAAGAGAAGCAAGCGCAGGCACAACAGTCGACCGTAACCCCCACAAAACCCATACAAGAGCCTCCGCAGTTGACCCCAGCGACAGCTACAACTACGGCAGTGTCGTCGCTGGCGCCGGTGTCGTCCATACAGCAGTCGCATCTACAGCAGCGCACTGTGCAGGTGAGTGATAGTAAGGAAAACGAGCACTTCGCTCAAGCATGGCTCCGCTCAGCCTACGAAGTTCTACCAGCGAACGACAACAGCGCTTGCGACGCCAACGATATGTACCGCCAGTACGTCGCGTGTTGCACCAAACTGTCTCGGAAGGGAGTCATCGCGCCCGCACACTTCCCCAGATTAGTCAGAACGGTGTTTGGAGGTACAGTGGGACCAAACACGGTGACGTTATCGACTGGCGAGACTCAACAGGCGTATATTGGCATCAGATCCAGAACTATGCAGAACAGAACTAATCCAGCTGCAGGACCAGCATCACCGATACTCAAAGCGCAGCTCACGAATAAGGCAGCAGTAGAAGCGAAACCCACTGTATCTCAACCACAAGTGCAGAATCCGAATCCAGTCCGAGGACAAACGATCATAGACCTAACACTAGCTTCAGAAAACGCTACGAGCCTTATTACGAATTGGCATGTATCGGGCGAGCCTTCATGCTCAGACCATAGAAGGATCCGCTTTACACTGACCACTAACGTGAGAGGGCCCGTACCCAAACGTAACCCGAGGCGTACCGATGTGCCCGGGTACAAGCGCCTTCTAGCTGCCCTACTAGCTAGGCACTTGgcacaaacaaatataaaagaaattacaCAGCTAGAATACACTGTAACAAAGCTCTCAGAATACCTAATAGAAGCTTACGACGCTTGCTGTAAACTAAGGACACCGCAGGCTAACAGCAAGCGAAGTCCGTGGTGGAATCCCGAGCTCGGTAAGCTACGCCAAACACTACGTAAGCACTTCAACAGAGCCAAAAACAGTAGGCTCACAGAAGACTGGGAAACATACAAAGAAACCCAatacacctacaaaaagcaaatcAGAACCGCCAGAAGGACTGCATGGCGGAAGTTTTGCGAGTCTATAGAAAACAACAATGAAGCTGCAAGGAGCCAACAACAAGCACCAACCTCCCACCCGCATCTGTCTCAAGCCCTGGAATCAACTCCGTCGAACACAACGCTGATCAAACACTTGTTAGCGCATAAAGTAAGCCCCGCACTACCGACACCGCTGCCGCAAGTAATGGACGTTGACCCAGAAGCCCTGATCAAATGTACGACAATTACACCAGGTGGTGTTGCCAGTAGCACGCCCACAGATAAGGTCCATATAAATCAGCCAGAGGATCAAGTTGTACCGAAAGAAGAACCAGTGCAAATTCAGATAGACGAGCAAACACAACTGACTATTAAATCCGCCCAAAACAAAATGCTAGCAGACTTGCTAAAGAAAAATTCCAACCCTCCACTACAAGTCGTTCAAATGGGCCCCCAAATCAACGCTCCAACCATCCAAATCACAGAAACGGGCCAAATCGTTCAGGTCAAGTCCGACCCAACGCCCGTCATTCAAATAAACGCTGACTCCGGCTTAGTATCCCAAGGAAACCAATactttcaaataaagaacgaacAGGGCCAGCTAATTCAAATTAAGAACGAACAAGGTCAAATCATTCAGTTGAAGAGTGACCAATTACAAGCGCCGATTCTTCAGTACAAGAACGAACAAGGTCAATTGGTTCAGGTGAAGGCCGACAGTCAGATTCAGATTAAGACTGATAAGGATGTCACGGAAACTGTGGTTACCGATCACTCGTACACCGAGCCGCCTGCTAAGAAAATAAAGGTCGACGAAAAGAACATGGCGCCTCAAGAAAGTGTGTCAAAAACAGCAGCGAATCTGTATGCAGCACTTGCAGCTTCAGCGTTGGAAGATGAAGAAGATTTGGTAAATATgattaatacataa
Protein Sequence
MAKAQINTKSSNYIKDREVFIKELKQFNESKNLPTKVPIVNGIEIDLYLFYTLVQQRGGLGKVNQNDTWESFLRPLRLPHPCINGSTLLRRIYGTYLEKYERAKGPPGRDDDNDMDEDPRRGRGGATPRTNFGGGTYVSASGETLRTGGARVAPASERLALSLLSPMPNEQDFAVNVCTVLAADHSNRLPLSTTPHILDFLLAHAGVYNHSSLRNTIGRSYFEARGRYPDDFWRLRAGGGGAKELADETKFMQPGVEQPDLIVQARAAYNTLTDCLLNGSEEEEMVIEKVYEEEVLEDWMADPPDENQLFAPELPGGAACVYTQRVLQIASIVRSLSFHDENVQYLAKNSTLIRFLLLCANSWVGTLRQSGLDTLGNVSTELIIKDPATCLISRHVLSTIQSALISQDRARVLAALELLNKLAQNEVNEDALLKALESKLYHEVCALLTLRDIMVLVCTLECVYALTSLGDRASESVARVPGLIHTLVSLVTVEAQSYGPRACILMRVVETVSGPSAIAAQAERDAQEKQAQAQQSTVTPTKPIQEPPQLTPATATTTAVSSLAPVSSIQQSHLQQRTVQVSDSKENEHFAQAWLRSAYEVLPANDNSACDANDMYRQYVACCTKLSRKGVIAPAHFPRLVRTVFGGTVGPNTVTLSTGETQQAYIGIRSRTMQNRTNPAAGPASPILKAQLTNKAAVEAKPTVSQPQVQNPNPVRGQTIIDLTLASENATSLITNWHVSGEPSCSDHRRIRFTLTTNVRGPVPKRNPRRTDVPGYKRLLAALLARHLAQTNIKEITQLEYTVTKLSEYLIEAYDACCKLRTPQANSKRSPWWNPELGKLRQTLRKHFNRAKNSRLTEDWETYKETQYTYKKQIRTARRTAWRKFCESIENNNEAARSQQQAPTSHPHLSQALESTPSNTTLIKHLLAHKVSPALPTPLPQVMDVDPEALIKCTTITPGGVASSTPTDKVHINQPEDQVVPKEEPVQIQIDEQTQLTIKSAQNKMLADLLKKNSNPPLQVVQMGPQINAPTIQITETGQIVQVKSDPTPVIQINADSGLVSQGNQYFQIKNEQGQLIQIKNEQGQIIQLKSDQLQAPILQYKNEQGQLVQVKADSQIQIKTDKDVTETVVTDHSYTEPPAKKIKVDEKNMAPQESVSKTAANLYAALAASALEDEEDLVNMINT*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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