Basic Information

Insect: Sesamia inferens
Gene Symbol: stc
Assembly: GCA_037179545.1
Location: CM073926.1:27425455-27452328[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.022 6.3e+02 2.2 1.2 2 10 12 20 12 20 0.93

2 15 2e-05 0.58 11.8 18.1 4 19 28 43 26 43 0.93

3 15 6.3e-08 0.0018 19.9 11.7 1 19 79 97 79 97 0.97

4 15 1 2.9e+04 -3.2 2.4 7 11 101 105 101 106 0.89

5 15 0.00039 11 7.7 13.4 1 19 138 156 138 156 0.98

6 15 0.7 2e+04 -2.6 0.1 4 6 163 165 162 166 0.80

7 15 5.3e-06 0.15 13.7 11.5 1 19 197 219 197 219 0.88

8 15 2 5.7e+04 -4.5 2.2 6 10 249 253 249 253 0.94

9 15 0.0018 53 5.6 7.4 1 11 259 269 259 270 0.95

10 15 0.024 6.8e+02 2.0 0.3 4 10 274 280 273 281 0.93

11 15 3.3e-06 0.095 14.4 15.0 3 19 288 304 286 304 0.92

12 15 1.2 3.4e+04 -3.4 2.5 14 18 336 343 332 344 0.50

13 15 0.00022 6.2 8.6 9.6 10 18 351 359 348 360 0.92

14 15 3.7e-08 0.0011 20.6 14.7 1 17 396 414 396 420 0.85

15 15 0.00043 12 7.6 11.2 1 19 426 443 426 449 0.72

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.022	6.3e+02	2.2	1.2	2	10	12	20	12	20	0.93
2	15	2e-05	0.58	11.8	18.1	4	19	28	43	26	43	0.93
3	15	6.3e-08	0.0018	19.9	11.7	1	19	79	97	79	97	0.97
4	15	1	2.9e+04	-3.2	2.4	7	11	101	105	101	106	0.89
5	15	0.00039	11	7.7	13.4	1	19	138	156	138	156	0.98
6	15	0.7	2e+04	-2.6	0.1	4	6	163	165	162	166	0.80
7	15	5.3e-06	0.15	13.7	11.5	1	19	197	219	197	219	0.88
8	15	2	5.7e+04	-4.5	2.2	6	10	249	253	249	253	0.94
9	15	0.0018	53	5.6	7.4	1	11	259	269	259	270	0.95
10	15	0.024	6.8e+02	2.0	0.3	4	10	274	280	273	281	0.93
11	15	3.3e-06	0.095	14.4	15.0	3	19	288	304	286	304	0.92
12	15	1.2	3.4e+04	-3.4	2.5	14	18	336	343	332	344	0.50
13	15	0.00022	6.2	8.6	9.6	10	18	351	359	348	360	0.92
14	15	3.7e-08	0.0011	20.6	14.7	1	17	396	414	396	420	0.85
15	15	0.00043	12	7.6	11.2	1	19	426	443	426	449	0.72

Sequence Information

Coding Sequence: ATGCGCGCGCCGGAGTACCAACGCGGGTCCACCGGCGCACACACCTGCGGCCGCGCATGTCGCCGACCACGAGCGTGCCCGCATCCCTGCACGCTACTGTGTCATCCCGGACCGTGTCCGCCGTGCCAGGCCACTGTCGTCAAACATTGCGGTTGCGGTGCAGAAACTCGTTCAGTACTCTGTAGCAGCAAGTTGCCGCAAGTGTGCGGTCGAGTCTGTGGACGTACCCTACTGTGTGGTGTGCATAACTGTAACAAGGACTGTCACGAAGGACCCTGTGACATATGTAGTGAAACTGTTGAACAAGTATGCCACTGCCCCGCGGCTAAGTCCCGCTCAGTAACGTGCACAGCCGAGACAGGCACGTGCACCAGCTGGACGTGCGGCGACACGTGCGGCCGCGTGCTCGCGTGCGGGGCGCACGTGTGTCGGGCACAGTGCCACGCGCCGCCCTGCGAGCCCTGCCAGCTGCTGCCGCAGTATGTGCACACCTGTCCCTGTGGGAATACACAGTTGGCTAAAGATTCCCGCAAGGCATGCACGGACCCCATCCCGCTGTGCGACAACATCTGTGCCAAACCGCTGCCGTGTGGCCCCGCCGGGGACAGACATTTCTGCAAACTAGATTGCCATGAAGGACCGTGTCCAGTATGTCCCGATAAGACAATACTGCAGTGCCGCTGCGGACACTCCAGCCGCGAGGTGCCCTGCGGCAACCTGCCCGAGATGTACAACAACGTGCTGTGCCAAAAGAAGTGCAATAAAAAACTGTCGTGCGGGCGACACCGCTGTCGCACGGTGTGTTGCGCGGCAACGTCTCACCGCTGTGCCGTGGTGTGCGGCCGCACGCTGTCGTGCCAGACACACCGCTGTGAAGAGTTCTGTCACACCGGACACTGCGCGCCCTGTCCACGTGTCAGTTTCGAAGAGCTAGCCTGTGAATGTGGGGCGGAAGTGGTCCTGCCGCCGGTCCGCTGCGGGGCGCGGCCGCCGGCCTGCAACGCGCCGTGTCCCCGCGGCCGGCCCTGCAGGCACCCGCCGCACCACTCGTGTCACTCCGGCGACTGCCCACCTTGTGTCGTACTCACTACTAAGCGTTGTCACGGCGACCACGAGGAGCGCAAAACAATACCATGTTCTCAAGAGGAGTTCTCGTGCGGCCTCCCTTGTGGGAAGCCTCTTCCCTGCGGCAAGCACACTTGTATCAAAACTTGTCACAAAGGACCCTGTGACTCTGGCAAATGCACACAGCCGTGCATGGAGAAGCGTCCGTCGTGTGGACACCCGTGTGCGGCGCCATGTCACGCGGGGTCGGGCGGAGCGTGTCCCAGTGTCGCGCCGTGTCGCCGTCCAGTACGCGCCACGTGTCCGTGCTCGCGGAGACACGCCGAACGACCATGCTTCGAGAACGCACGGGATTATGCCAAGATGATGAGCGCTCTAGCCGCTACTAAGATGGCGGAAGGTGGCTCAGTAGACCTGTCAGATGTACAGCGCCCCGGCAATATGCTTAAAACTCTCGAATGCGATGACGAGTGCCGCGTAGAAGCCCGCACCCGTCAGCTGGCCCTAGCGCTTCAGATACGAAACCCAGACGTGTCGGCCAAACTAGCGCCGCGGTACAGCGAGCACGTGCGCGCCACGGCCGCACGCGAGCCCGCCTTCGCGCAACAGACGCACGACAAGCTCACCGAGCTCGTGCAGCTTGCTAAGAAGTCAAAACAGAAGACCAGGGCGCATTCCTTCCCTTCGATGAACTGGCAGAAGCGTCAGTTCATACACGAACTCTGCGAACACTTTGGCTGTGAGAGCGTTGCCTACGATGCTGAGCCCAACAGGAACGTCGTGGCTACTGCTGATAGAGAAAAGTCGTGGCTGCCAGCCATGAGCGTGCTGGAAGTGTTGGCACGCGAGGCGGGCAAGCGACGCGTGCCGGGACCCGTGCTGCGAGCGGCTCACGCCGCGCCTGTCGCCGGCTCCAACAACAAATCGGGATGGGCAACCCTCACCTCGACCAACGCCTGGGCCGCCCGCAGTCAGCCGAAGCCACAGCAGCCTCAGCAGCCTCAGCAACCACCAGCAGCAGAGAAAATCGACTATTTTGACAACCCGCCTGACAACTAG
Protein Sequence: MRAPEYQRGSTGAHTCGRACRRPRACPHPCTLLCHPGPCPPCQATVVKHCGCGAETRSVLCSSKLPQVCGRVCGRTLLCGVHNCNKDCHEGPCDICSETVEQVCHCPAAKSRSVTCTAETGTCTSWTCGDTCGRVLACGAHVCRAQCHAPPCEPCQLLPQYVHTCPCGNTQLAKDSRKACTDPIPLCDNICAKPLPCGPAGDRHFCKLDCHEGPCPVCPDKTILQCRCGHSSREVPCGNLPEMYNNVLCQKKCNKKLSCGRHRCRTVCCAATSHRCAVVCGRTLSCQTHRCEEFCHTGHCAPCPRVSFEELACECGAEVVLPPVRCGARPPACNAPCPRGRPCRHPPHHSCHSGDCPPCVVLTTKRCHGDHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDSGKCTQPCMEKRPSCGHPCAAPCHAGSGGACPSVAPCRRPVRATCPCSRRHAERPCFENARDYAKMMSALAATKMAEGGSVDLSDVQRPGNMLKTLECDDECRVEARTRQLALALQIRNPDVSAKLAPRYSEHVRATAAREPAFAQQTHDKLTELVQLAKKSKQKTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVLEVLAREAGKRRVPGPVLRAAHAAPVAGSNNKSGWATLTSTNAWAARSQPKPQQPQQPQQPPAAEKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: iTF_01093719;
80% Identity: -