Sinf041618.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sesamia inferens
Gene Symbol
nfxl1
Assembly
GCA_037179545.1
Location
CM073945.1:22822708-22825188[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 2 5.7e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 17 0.014 4.1e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 17 3.1e-07 0.0089 17.6 15.9 3 19 186 202 185 202 0.95
4 17 7e-08 0.002 19.7 10.0 3 19 239 255 237 255 0.91
5 17 1.7 4.8e+04 -3.9 1.9 6 10 280 284 279 284 0.83
6 17 7.9e-09 0.00023 22.7 12.3 1 19 290 308 290 308 0.99
7 17 1.7e-05 0.49 12.1 19.2 3 19 345 361 337 361 0.88
8 17 1.2 3.6e+04 -3.4 0.4 7 11 365 369 365 369 0.84
9 17 6.7e-05 1.9 10.2 20.3 1 18 395 412 395 413 0.97
10 17 4.5e-10 1.3e-05 26.7 14.0 1 19 422 440 422 440 0.99
11 17 0.0002 5.9 8.6 6.4 9 19 488 498 486 498 0.89
12 17 0.15 4.2e+03 -0.5 10.3 3 12 509 518 508 518 0.91
13 17 0.31 8.9e+03 -1.5 3.5 14 18 547 551 547 552 0.87
14 17 0.28 8.1e+03 -1.4 0.3 7 11 567 571 567 572 0.88
15 17 9.1e-06 0.26 13.0 5.3 1 11 588 598 588 599 0.97
16 17 3.3e-05 0.94 11.2 14.9 1 18 628 645 628 646 0.92
17 17 4.7e-06 0.14 13.9 12.9 1 18 687 705 687 706 0.89

Sequence Information

Coding Sequence
ATGGCGCGCCGATATAGAGACGCTGCGGCAAAATTGCAGCAAAACGTCCAGAAACATCTAAAAGTAATGAAAGAACTATCGTCATCTGAAGATGAGGATCCTTGCGAATCTAACGTCTTAGAAAGCATGTTCCAGAGCTACTGGCGTGGCGGCGGAGACACTCAAATGCTGAACAGGACCAAAAACCTTCTTGAAGAAGTTATAAGCGGCCGTTCTGTAACGTGTCTTATATGTATAGGATCGATAAAAAAATCTCACGCTATATGGACCTGTGATCATTGTTATTCATACTTCCACCTATCTTGTATTCAAAAATGGGCGAATGATAGTATAAGCTTGCGCAGTGAAGAAAGTACGGGACCGATTGCTGttgtaaaacaacaaaaaatcgAATGGTGTTGCCCTAAGTGCCGAAACTCTTATTCTAAAGAAGAAATCCCTCGTAAATATCGCTGTTTCTGCGGCCAAACTGATGACCCACCACATCATCCTTGGCTCATTCCTCATACTTGTGGCGAAGTCTGTAGAAAGCGGTTGTCTACTGGTGAAAATTGTAAACACAAATGCCTGTTGCTTTGCCACCCTGGTCCCTGTCCTCCATGTCCACAAACTGTCAATGGCTTATGTTTCTGTGAGAAGGAACGTAAGAGAGTGAGATGCAGTGCTGCTAAATGGTCCTGTGGCCAACTTTGTAAGAAAACTCTTTTATGTAGAACTCATTATTGTGAAAATGTCTGTCATGCAGGTGATTGTCCTGAATGTAGCTTTACTAGCATTCAGCAATGCCAATGTGGTTCAGAGAAAGCTAAAAGACCATGTAATGATCCATTTTGGCAGTGTAAGAAGCCTTGTAACAAGCTCTTTTCCTGTGGCTATCATAAATGTGATAAAATCTGTCATTCAGGCGAATGTGGAGACTGTCCCAACTCTGGAATTATATCATGTCCTTGTGGAGCTAACCAGCGTTTTGTCCAATGTCCAGATGTTATGGAAACCTGCTTAGGTACATGTGGTAAGCAGCATGAAGATTGTGATCATAAGTGCCCAGAAAAGTGCCACAATGGCAAGTGCCCACCTTGTCAAGTTTTAGTTGAAAAGAAATGTCATTGCTCTACACATACTAGGTCCCTTCCTTGCAGCAAAGACTTCAAATGTGATTCTAAATGTCGAGGAATAAGGCCATGTGGTAAACATGGCTGTGGAAGAAAGTGCTGCAATGGGAATTGCCCTCCCTGTGAGAAAATATGTGACAAAGGCCTCCACTGTGGTCGGCATAAGTGCACAAATATTTGTCATCGTGGACCATGCTATCCATGTCCTTTAGAATCAAAAGTGACGTGTAGGTGCAAGGAAACGTATGTAAGAGTGCCGTGTGGACGAGAGCGGCAGACAAAACCTCCAAAATGCAACTTGCCTtgcaaaattaaatataaatgtgGTCACAGTGAAGAAAATAAACACTCGTGTCATTTTGGTGACTGTCCACCTTGCAAAGCTGTCTGTGACAAGGAGTATTCTAAGTGTAGGCACCATTGTAAAGCGGTATGCCATGAATATGTTGCAGTTGTGTTCAAACAAGTAGAGAAACCTGCAACTCCTTGGGAGGTACAACCACCAAAGACTAAGATTATGACTTTAGATTGTCCACCATGTGAAACACCAGTACCAATGGTTTGTTTTGGAGAGCATGAGACTGACCAACAGCCTTGTCACATAGCTTCACGAAGACCTTGTGGAAGAGAATGTGGAAAACCATTGGCTTGTGGAAACCACAAGTGCACTTTACTCTGTCATTTACACAGCCCCAATCCTGAATACCCAAATGTGCCTTCAAGTTGTAAGCAATGTAACAGAGAATGTTCAGTTCAGCGTCCTGAAAAATGTGGTCATAAATGTCCTATTAGAGCTTGTCATCCTGGTCTTTGCCCACCATGTGAGATACTTGAACGTTTAGCTTGCCACTGTGGTGTGACAGAGATATATTTACGCTGCAGAGAATTGTCTGCAGCTACGGAAGAAATGCTATCATGCAAGCAACAATGTCCTAAGAACTTAGATTGTGGCCATCGCTGTCGTAAAACATGCCATTCAGGATCTTGCGGCAACCAAGTATGCACCAAGAAGACTAAGGTGCACTGTCCGTGTGGGAATATAAAGAAGGAGGCTCCTTGTAACTCGGTTAGAAATGGAGACTTTAAAATACTGTGTGACAGCATCTGTCAAGCTAAGAAAGCTGCTGCTAAAATTGAACTAGAGAAAGAGATGCAGAGATTGAAAGAGCTCGAGGAAGAAAAGAATCGTAAAGAGTTAGCAGAGTACGAGTGGAAACTAAGTGGTAAGAAGAAAAAGTACAAGGAAAAGAAAATGCAGGTTGGCAAAGATGACCGAGGATTCCTAAAGAGGCATTGGGTACCAATATCATCATTCGTGGTTACAATGCTAGCggctatttattatatattttatgtaggcTTAGAATAG
Protein Sequence
MARRYRDAAAKLQQNVQKHLKVMKELSSSEDEDPCESNVLESMFQSYWRGGGDTQMLNRTKNLLEEVISGRSVTCLICIGSIKKSHAIWTCDHCYSYFHLSCIQKWANDSISLRSEESTGPIAVVKQQKIEWCCPKCRNSYSKEEIPRKYRCFCGQTDDPPHHPWLIPHTCGEVCRKRLSTGENCKHKCLLLCHPGPCPPCPQTVNGLCFCEKERKRVRCSAAKWSCGQLCKKTLLCRTHYCENVCHAGDCPECSFTSIQQCQCGSEKAKRPCNDPFWQCKKPCNKLFSCGYHKCDKICHSGECGDCPNSGIISCPCGANQRFVQCPDVMETCLGTCGKQHEDCDHKCPEKCHNGKCPPCQVLVEKKCHCSTHTRSLPCSKDFKCDSKCRGIRPCGKHGCGRKCCNGNCPPCEKICDKGLHCGRHKCTNICHRGPCYPCPLESKVTCRCKETYVRVPCGRERQTKPPKCNLPCKIKYKCGHSEENKHSCHFGDCPPCKAVCDKEYSKCRHHCKAVCHEYVAVVFKQVEKPATPWEVQPPKTKIMTLDCPPCETPVPMVCFGEHETDQQPCHIASRRPCGRECGKPLACGNHKCTLLCHLHSPNPEYPNVPSSCKQCNRECSVQRPEKCGHKCPIRACHPGLCPPCEILERLACHCGVTEIYLRCRELSAATEEMLSCKQQCPKNLDCGHRCRKTCHSGSCGNQVCTKKTKVHCPCGNIKKEAPCNSVRNGDFKILCDSICQAKKAAAKIELEKEMQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKKMQVGKDDRGFLKRHWVPISSFVVTMLAAIYYIFYVGLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_01440670;
80% Identity
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