Basic Information

Insect: Sericinus montela
Gene Symbol: -
Assembly: GCA_029286605.1
Location: JAGSMR010000087.1:1761756-1762892[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00061 0.058 14.5 1.0 2 21 75 94 74 95 0.92

2 9 0.00037 0.035 15.2 1.6 3 23 130 151 128 151 0.95

3 9 1.2e-05 0.0011 19.8 0.5 2 23 157 178 156 178 0.96

4 9 0.95 90 4.4 2.9 2 21 182 201 182 202 0.92

5 9 1.7e-05 0.0016 19.3 1.7 1 23 228 251 228 251 0.94

6 9 0.00039 0.037 15.1 0.8 1 23 257 279 257 279 0.92

7 9 0.016 1.5 10.0 0.1 1 23 285 307 285 307 0.98

8 9 0.0013 0.12 13.5 0.5 1 23 313 336 313 336 0.94

9 9 1.5e-05 0.0014 19.5 0.6 2 23 343 365 342 365 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00061	0.058	14.5	1.0	2	21	75	94	74	95	0.92
2	9	0.00037	0.035	15.2	1.6	3	23	130	151	128	151	0.95
3	9	1.2e-05	0.0011	19.8	0.5	2	23	157	178	156	178	0.96
4	9	0.95	90	4.4	2.9	2	21	182	201	182	202	0.92
5	9	1.7e-05	0.0016	19.3	1.7	1	23	228	251	228	251	0.94
6	9	0.00039	0.037	15.1	0.8	1	23	257	279	257	279	0.92
7	9	0.016	1.5	10.0	0.1	1	23	285	307	285	307	0.98
8	9	0.0013	0.12	13.5	0.5	1	23	313	336	313	336	0.94
9	9	1.5e-05	0.0014	19.5	0.6	2	23	343	365	342	365	0.96

Sequence Information

Coding Sequence: ATGTGGTCCAATTGCGTATACAGCATAGAGAATGTTGTGGACACGAAGAAAACCCCGCACTCGTTCTACACCGTGATGAGGAAGGACCTCTCCGTTCTTTCCGTGACGGACTTCAACGGCGACCCCCAATCTCTGGTGAACCACCTCGTCAACCGCCTGACGAAGAAGAGGACCGTGGTCGCGGAGAAGAAGCCGCGCGTTGCACGAACCGGACCGCCCTGCGATTGTACGGACTGCGGCAAAAGTTTCCTCAGTCCGTATTATCTGAATATGCACCTGAAGAATAGCGGTCAGAAGGAAGCGTGCCATATATGCGGAGTTGTCAACATGAGGGGCCTGGAAATGATGGACCACCTGCGAAGAGTGCACGGCGAAAAAGTCCACCTCTGCAGCGAATGTCCAACTTTATTCACTAATGAGCAAGAGTTAAAGAGACACGCACGGAAATCGCATAGAGCGGGGGCTCTGACGTGCGGCGATTGCGGACGGACGTTTTCGCGGAACATGTCCTTCGAGGTTCATTCGCAAATGCACGCGGTGAGGACTTGCAGGTCATGCGGTTCGCAGTTCACCAACCGGGGTTGTTACAGAGAGCACCGCTCGAAGTGCGAGCCCGACGCGAAACCGGACATTAAAACCATCCCGAGAAGCCGCCGCTCCAACATCCGTGATCCGGCCACCTTCATATGCGATCATTGCGGCAAAACCTACCACTCTAGGCCGCAACTAAAGAATCATATAATTTGGATACACATGGACATAAGGCCGCATCAGTGTCAGTGGTGCGGAAAGAGGTTTTACACGCCGACGCGTCTGGCCGAGCACAGCGTTGTCCACACACGCGAACGCAACTTCGAGTGTGACATTTGTGGCGCGAAACTCGTTACCAAAATGGCCGCCGTGTACCATAGACGAAGGCATACGGGCGAGAAGCCGTACGAGTGCGAGGAGTGCGGCGAGAAGTTTATATCGTCGTCGCGTAGATCGGAACACGCGAAACGGAGGCACGGAAAGGGTATCAGGATGCAATGCACGGAATGTCCGGCGAATTTCGTTAGAAGTCACGAACTGAGGAAGCATATAGAGAGAGCTCATAGGAGTCGCAACTCGCAGTTAATTATCGACGTACAAGGGTAG
Protein Sequence: MWSNCVYSIENVVDTKKTPHSFYTVMRKDLSVLSVTDFNGDPQSLVNHLVNRLTKKRTVVAEKKPRVARTGPPCDCTDCGKSFLSPYYLNMHLKNSGQKEACHICGVVNMRGLEMMDHLRRVHGEKVHLCSECPTLFTNEQELKRHARKSHRAGALTCGDCGRTFSRNMSFEVHSQMHAVRTCRSCGSQFTNRGCYREHRSKCEPDAKPDIKTIPRSRRSNIRDPATFICDHCGKTYHSRPQLKNHIIWIHMDIRPHQCQWCGKRFYTPTRLAEHSVVHTRERNFECDICGAKLVTKMAAVYHRRRHTGEKPYECEECGEKFISSSRRSEHAKRRHGKGIRMQCTECPANFVRSHELRKHIERAHRSRNSQLIIDVQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -