Basic Information

Insect: Sericinus montela
Gene Symbol: -
Assembly: GCA_029286605.1
Location: JAGSMR010000118.1:117331-126573[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0024 0.23 12.6 0.2 1 23 250 272 250 272 0.98

2 10 0.11 11 7.3 0.5 2 20 300 318 299 320 0.93

3 10 0.0003 0.029 15.4 0.2 3 23 343 363 341 363 0.96

4 10 3e-06 0.00029 21.7 1.7 1 23 367 389 367 389 0.99

5 10 0.16 16 6.8 0.2 1 23 394 417 394 417 0.92

6 10 0.21 20 6.5 0.8 1 23 423 446 423 446 0.92

7 10 0.00019 0.018 16.0 1.3 1 23 453 476 453 476 0.98

8 10 2.3e-05 0.0022 19.0 2.3 1 23 482 504 482 504 0.98

9 10 5e-05 0.0048 17.9 4.5 1 23 510 532 510 532 0.96

10 10 5.7e-06 0.00054 20.9 1.8 1 23 538 560 538 560 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0024	0.23	12.6	0.2	1	23	250	272	250	272	0.98
2	10	0.11	11	7.3	0.5	2	20	300	318	299	320	0.93
3	10	0.0003	0.029	15.4	0.2	3	23	343	363	341	363	0.96
4	10	3e-06	0.00029	21.7	1.7	1	23	367	389	367	389	0.99
5	10	0.16	16	6.8	0.2	1	23	394	417	394	417	0.92
6	10	0.21	20	6.5	0.8	1	23	423	446	423	446	0.92
7	10	0.00019	0.018	16.0	1.3	1	23	453	476	453	476	0.98
8	10	2.3e-05	0.0022	19.0	2.3	1	23	482	504	482	504	0.98
9	10	5e-05	0.0048	17.9	4.5	1	23	510	532	510	532	0.96
10	10	5.7e-06	0.00054	20.9	1.8	1	23	538	560	538	560	0.98

Sequence Information

Coding Sequence: ATGGACGTCGATAATACAGACATTATGGTAGAAACTTTGCCATTGCTAGGTGTTTGCAACTTATGTCTGCACGATGGAATAGTGGAAAGTATGCTCATCAAATCTGAACACAATGGAAATGCAGTAACGTATGTGGAAATGCTCTTAAACTGTTTCTCAATAGACGTGCTTACAGTGGACTTAGAGGACACCAAGCGAGTCATATGCAACGAATGTATCGACAAATTGAAGGACTCCATACACTTCCGGGAGAAAGCCCAAGCTTCATTGAAAAGCTTAGAGTCATCGGTGAATTTACAAAAGCAGAAGCAGCAAGCGCTCAAGAACATAAAGAAAGAGATAACAGTAGAAGATCTCATGCGGGATGACTGTGACAGCGATACCGACCATATTCCTGTGGAGCAGAAGCAGCAAGCGCTCAAGAACATAAAGAAAGAGATAACAGTAGAAGATCTCATGCGGGATGACTGCGACAGCGATACCGACCATATTCCTGTGGgtGTAATTGAAGATGCCTTGTATGGAGTTAAGCAGGAGTATCAGAACATACAAGACGTAACAGACGTTAGTGATCTTATAAAAGATGAAGACCTAGAGGAGTACAGTCCGAAGAGAGCGAGACGGAAAACAATATCGAGCACGAAAAAGGCAGTGTCATACTCTGTCCAAAGCAAATGCGAGACTGCCGAGACCGAGGAGATGCTGCAAGCGGGACTATTTCCCTTCAAAATATACAAGGACAAGACGTTCTCTTGCGTCGTATGCCCGCAGAGGTCCACCAGCCTGGACGATATCAAATCACACATCAAAACCCACAGCACCACAAACCTGAACAGGGCCTTCAAGAAGATCAGCTCCTCGAAACTGCAGAAGTTCTATAAGCACTCGAACAAGCTGCGCTGCAAGCTCTGCAAAACCGATCTGACTCACTACGAGGAGTTGAGGCAGCACGTGGACAGCTGCGACCGTCCGAACAGCAGCAGATGGAACAAGCTGCCGTTCAAGCTGGAGAAGGACCAGCTCGACTGTCCCGTCTGCGAGAAGAGATTTCTCAACTTCGTCAATTTGAACACACACATGAACGTCCACTATCCGAACTACACCTGCGAGAGCTGCGGCAAGAGTTTCGCCTCGCACGCGAGACTTAGAGGTCACATGCGCACCCACGAGTACGGAGACTTCCCGTGCCGTTACTGCGACGCGATCTTCGATAGGGTGACGAAGAGAGAGAACCACGTCGCGAAGGAGCACAAGTCCGGGCTGCGTTACGCGTGCAAGAGATGCAACATATCTTTGTCCTCCTTCTACAAGCGGCAGAAGCATCTCGCGGAAGTGCACAACGAGGAACTGAAGAGATACAAATGCAAAGCGTGCACGCAGAGCTACATAACGCCGGGTCATCTCTCCAGCCACGTGAGGAGGGATCACCTGAACGAGAGGAACCACAAGTGCGATAAGTGCGATCTGGCGTTCTACACGAAGAACGCACTGAAGATGCACATGATAAAGCACGACGGCGAGAGGATACACGCGTGCCACATCTGCCAGAAGTCCTACCAGAGGCTGAAGACACTGAGGGAGCACATGCGGATACATAACAACGATAAACGCTTCGTCTGTACGGTCTGCGGGCGCGCGTTCACGCAGAAGTGCACCTTGAAGGGCCACCTGAAGGTTCACGAGAGGGGGGCGGATGGGGCGGTGGGGGGGCGGGCGCACGACGCCGACGGGCGTGTTGTTATATGCAGGTTGAAGCCTCCTGAGTAG
Protein Sequence: MDVDNTDIMVETLPLLGVCNLCLHDGIVESMLIKSEHNGNAVTYVEMLLNCFSIDVLTVDLEDTKRVICNECIDKLKDSIHFREKAQASLKSLESSVNLQKQKQQALKNIKKEITVEDLMRDDCDSDTDHIPVEQKQQALKNIKKEITVEDLMRDDCDSDTDHIPVGVIEDALYGVKQEYQNIQDVTDVSDLIKDEDLEEYSPKRARRKTISSTKKAVSYSVQSKCETAETEEMLQAGLFPFKIYKDKTFSCVVCPQRSTSLDDIKSHIKTHSTTNLNRAFKKISSSKLQKFYKHSNKLRCKLCKTDLTHYEELRQHVDSCDRPNSSRWNKLPFKLEKDQLDCPVCEKRFLNFVNLNTHMNVHYPNYTCESCGKSFASHARLRGHMRTHEYGDFPCRYCDAIFDRVTKRENHVAKEHKSGLRYACKRCNISLSSFYKRQKHLAEVHNEELKRYKCKACTQSYITPGHLSSHVRRDHLNERNHKCDKCDLAFYTKNALKMHMIKHDGERIHACHICQKSYQRLKTLREHMRIHNNDKRFVCTVCGRAFTQKCTLKGHLKVHERGADGAVGGRAHDADGRVVICRLKPPE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -