Smon020535.1
Basic Information
- Insect
- Sericinus montela
- Gene Symbol
- -
- Assembly
- GCA_029286605.1
- Location
- JAGSMR010000118.1:201509-237002[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 0.14 13 7.1 0.1 2 23 351 373 350 373 0.91 2 30 4.5 4.3e+02 2.3 0.6 2 23 399 421 398 421 0.93 3 30 0.022 2.1 9.6 0.4 2 23 444 465 443 465 0.95 4 30 0.00018 0.017 16.2 0.1 1 23 469 492 469 492 0.98 5 30 1.6 1.5e+02 3.7 1.1 2 23 499 522 499 522 0.92 6 30 0.0065 0.61 11.2 1.9 1 23 526 549 526 549 0.94 7 30 0.13 13 7.1 4.5 1 23 556 579 556 579 0.96 8 30 0.00014 0.013 16.5 3.4 3 23 586 606 584 606 0.96 9 30 0.025 2.3 9.4 0.1 1 22 629 650 629 652 0.91 10 30 2.4 2.3e+02 3.2 0.8 2 23 678 700 677 700 0.96 11 30 0.013 1.3 10.2 0.1 1 23 748 771 748 771 0.95 12 30 0.32 31 5.9 1.3 2 22 777 797 776 797 0.93 13 30 0.015 1.4 10.1 0.4 1 23 804 827 804 827 0.96 14 30 0.084 8 7.7 0.3 1 23 835 858 835 858 0.96 15 30 0.16 15 6.8 0.6 3 17 865 879 864 880 0.89 16 30 0.025 2.3 9.4 0.1 1 22 924 945 924 947 0.91 17 30 2.5 2.3e+02 3.1 0.8 2 23 973 995 972 995 0.96 18 30 0.017 1.6 9.9 0.1 1 23 1043 1066 1043 1066 0.95 19 30 0.042 4 8.7 0.4 2 21 1072 1091 1071 1092 0.94 20 30 0.014 1.3 10.2 0.4 1 23 1099 1122 1099 1122 0.96 21 30 0.084 8 7.7 0.3 1 23 1130 1153 1130 1153 0.96 22 30 0.21 20 6.5 0.3 3 17 1160 1174 1159 1175 0.91 23 30 0.39 37 5.6 0.8 2 23 1205 1227 1204 1227 0.93 24 30 0.0017 0.16 13.0 1.5 1 23 1325 1348 1325 1348 0.91 25 30 3.7 3.5e+02 2.6 0.3 3 20 1354 1371 1353 1373 0.91 26 30 2.7 2.6e+02 3.0 0.1 3 11 1382 1390 1380 1399 0.89 27 30 0.00018 0.017 16.2 1.2 1 23 1410 1433 1410 1433 0.90 28 30 0.078 7.4 7.8 1.8 1 23 1438 1460 1438 1460 0.97 29 30 3.4e-05 0.0032 18.4 0.6 1 20 1466 1485 1466 1488 0.94 30 30 5.2e-05 0.0049 17.8 2.3 1 23 1494 1517 1494 1517 0.97
Sequence Information
- Coding Sequence
- ATGGCTGCAAAAACATCAGAGTGGCGACCGGGCCCCACGGTCTGTCGTTGTTGTCTCTCAGAGGGCTGCTATAAAGACATTTCAACTGAATATTTCTGGATGGGTAAACGTGAAGTTTACGCCGAGATGCTCTCAGAGACCTTCGATTTAAGTATTGCCTATTCACAATCGGGTGGGCCTAACAGCAACAGTCGGCTGATCTGCGAACCTTGCATATCTCGTTTACGTGATGCCGCCGACTTCAAGAGGCAGATTGCCTATTCACAATCGGGTGGGCCTAACAGCAACAGTCGGCTGATCTGCGAACCTTGCATATCTCGTTTACGTGATGCCGCCGACTTCAAGAGGCAGGTGGTTGAATGTGAGAAAACATTCCTACAGCATCTGGACCCCAGCAGTTCGAGTATAGACGCTATCAAAGTGGATGATCAGCCATTAACGAAACTGGCCAGCAAAGTGCCCAAAAAGGAGTCCGTAGACCTATTGGATCTGATCGACAACGCCAAAGTGGCGGAGAAGCGAAAGTCCGCAGTGAAAGTGAAAGCAACGCCCATCAAGAAGGTTAAATTGAGCAAGGAGACGAAAGCATCTGCGAGTAAGGCCAAGCCCGAGAAGAAAAAGAAAGTGGATGATCAGCCATTAACGAAACTGGCCAGCAAAGTGCCCAAAAAGGAGTCCGTAGACCTATTGGATCTGATCGACAACGCCAAAGTGGCGGAGAAGCGAAAGTCCGCAGTGAAAGTGAAAGCAACGCCCATCAAGAAGGTTAAATTGAGCAAGGAGACGAAAGCATCTGCGAGTAAGGCCAAGCCCGAGAAGAAAAAGAAAGTGACAGAAGAGGAGCCCCTGGAGGAGGAGAAGGAAGTGAAACTTGAGCAGGTGAAGATTGAAAAGGTGGGCAGCGATGAAGAGTTTGATGACCTGCCCAACTTTGgggatgatgatgacgacgatgaTGATGATAagGAGTCTGATCCCGTGAGGAGGAACGCTGAGATGCTCATAAAATATACGTCAGCGAGTCCATTCCGCGTGAACGTGAAGACCATTATGTGCGTATACTGTGGCGATTTGTTCGAGGACCCCGACGAGTTCAGGGCGCACATGGTGCACGAGCACGAGACTTTCCGAGTGACCATGGCGTTCGCACGCCTGCCCAAAACCGAATACGTCAAAATCGATATCACAGACTTGCGCTGCAGGCTGTGCCGCCATATGTACAAAGATTTAGTACAGATTGGTGAACATTTGAAAATCGCCCACGGGAAAGACGTGCGCACTGACTCCCCACTAGGCGTGATGCCGTACCTCCTCGACAAGAACAACTGGAACTGCGCTGTTTGCGGCAAAAACCTCCCCTCCCTTCTCCACCTGAACAAGCACACCGTCACCCACTTCCTGAGTTACGTTTGCGAAATATGTGGCAAGAGTTACATCGCCTCCACGGGTTTGCTGACCCACGTTAGATCGAAACACGAGAAGGAATATAGCGCGTATTGTAAGCGGTGCCAGGTGATCTTTCCGTCGATGAAGGCGAAACAGATCCACCAGAGGACGTCAAAGCATTGCATGACTCACTGCTGCCCCGAATGCCCGGAGAGGTTCCCGAGTTACGAATATAAGCAGCGGCATATGGTATCTGCTCACGGTATGACGCGTAAGGAGTACAGCTGCACGCGGTGCCCTTTGAGTTTCAACCATCGCCAGGCGTTCTATGACCATTTCAAGAAGTCCCACTCGGTCGATTGCGTCATTTGCATGCATTGCGGGCATAAGTTCGCGAGCGCGTCCAAACTGAATAGGCATATGACGAAACACGCAACGAACGCGAAATTGCTTTTAAATTCCGTCACCGCTTACCCTTTCCGGGTCAGAGATAAATCTTATGTGTGCGTCTACTGCCGCGAGGTGTACACGGACCCGGAGGTGTTTAAGATGCACATGGGCGACGACCACGGCACTTTCGATCTGAAATTAGCGTTCCACAAAATGCCAAAGACGGACTACATAAAGGCGGACATATCCGAGATGCGCTGTAGGCTCTGCGACCATATGTTGAAAGACCTCAACACGGCCGCTGAACACTTGAAGACGGTCCACGACATGCCGATAGAGTTGGATGCGAACTTTGGCATCATGCCGTTCAATCTGCAACGGAACCTGTACGTCTGCGCCATCTGTCAGATGAAGATGCCCTCGTTGACGATTATATGCCGTCACACCTTGACCCACTTTCTCGCGTACGCTTGTAAATTGTGCGGCCTGGGTTTCGCGACGACCACTGCGATGCTGAAGCACGAGCGCGGCAAGCATCAGGCGATAGAAACGAAGTGCAGGAAATGCGATCAGATATTCCCGAACGAGGAGGCTAAGCACCGGCATAAGCGGATGAGTCAGACATGCCTGCCCTACGTTTGCATGGTGTGCGCGCAGAGATTTATCGATCAGAAGGCGAAGACACGTCACATGCAGGAGCAGCACGGGGTGGGCAGCAAGGACGAGTACGAATGCGTGGAATGCAGTCTCATGTTTACCGAGGAGAAGGAATATTATATGCATCTCAAGTTGGAGCATTCGCTGGAAACGGCCATTTGCAAGAAATGTGGATTGAAGTTCACCTCGACGCACGCTTTAAAGCACGAGGAAGAGATAGATGGCTACAGCGGAGATTTTTCTGTTTTAGACCTGACGGTTGACGTGGTGCGCAGGAACGCGGAGTTGCTTTTAAATTCCGTCACCGCTTACCCTTTCCGAGTCAGCGATAAATCGTATGTGTGCGTCTACTGCCGCGAGGTGTACACGGACCCGGAGGTGTTTAAGATGCACATGGGCGACGACCACGGCACTTTCGATCTGAAATTAGCGTTCCACAACATGCGAAAGACGGACTACATAAAGGCGGACATATCCGATATGCGCTGTAGGCTCTGCGACCATATGTTGAAAGACCTCAACACAGCCGCTGATCACTTGAAGACGGTCCACGGCGTGCCGATAGAGTTGGACGTGAACTTTGGCATCATGCCGTTTAATCTGCAAAGGAACCTGTACGTCTGCGCCATCTGTCAGATGAAGATGCCCTCGTTGACGATCATATGCCGTCACACCTTGACCCACTTCCTCGCGTACGCTTGTAACTTGTGCGGCCTGGGTTTCGCGACGACCAATGCGATGCTGAAGCACGAGCGCGGCAAGCATCAGGCGATAGAAACGAAGTGCAGGAAATGCGATCAGATATTTCCTAACGAGGAGGCGAAGCAGCGGCATAGGCGGATAAGTCAGACATGCCTGCCCTACGTGTGCATGTTGTGCTCGCAGAGATTTATCGATCAGAAGGCGAAGGCGCGTCACATGCAGGAGCAGCACGGGGTGGGCAGCAAGGACGAGTACGAATGCGTGGAATGCAGTCTCATGTTTACCGAGGAGAAGGAATATTATATGCATCTCAAGTTGGAGCACTCGCTGGAAACGGCCATTTGCAAGAAATGCGGATTGAAGTTCACCTCGACGCACGCTTTAAAGCTGGTCCAATGGCTCGTGGCGAGAAATAACGCTAAGGTTATCTTGAAATACACGACTGTGTATCCTTTCCGACTGCCGGGCGATTCATTGGTATGCGTCTACTGCTGCGAGGTCTTTGACGATCCCAAGGACTACCGGGCGCATCATGACATGGAGCATACCAGCTTCCATGTGGACACTGCGTTCGGTCACGTCTTTACCAATTACAACGAATATCTAAAAGTCGATTGTTTCGATCTAAAATGTCGTCTGTGTTTTGAGAATTTCGAAACGATAAATTCGATCGCCGAACATCTAGCACAGAGTCATTCGATAAAGATCAATTTGAAAACGGAGATCGGTATGCAGATGTTCAAACTCGGCTCGGAGAAATGGGTTTGCGCTATATGCGGCAGGAAGCTGCCGTGTTTGCGAGCTCTCAGTCGCCACACCAGTTGCCACTACCACAAGTTCACGTGCGAGACGTGCGGGAAATCCTACCTCAGCCGAGAGAACTTGACGAAGCATTTCGCTTACAGCCACAGCGGgtataaaatatgtcttcgttGCAAGGAAACTTTCCCCAGTTGCGAGGCCCGGCGGGAGCATATACTGGCTTCTATGTCGTGTTGGCCCTTCGGCTGTAACATTTGCGGTCAGAGATTCGCCGGTAAAAAGATTAAAATGGAACATCTCGTTGAAGTTCACGGAATAGGACCCAAAGTTTACAACTGTCCGGAGTGCGATAAGAGTTTTGACAGGTGGCGTTCATATCACAGTCATTTTGTGGTCGCGCACACCACAAACGCTTACGCCTGTTCGTTCTGCGAGCATAAGTTTGATGACAAGAAAAGATTTCTGGACCACATAATTGTTCATACAAAGGAGAAAGCCTTCCCTTGCACGGTCTGCTCAAAGTCCTTCGGCCGGAAGAAGAATCTGATGCAGCACATGTGGATACACAAAGAACAGAAACGTTTTGAGTGCAATCTTTGCAACAAGCAGTTCAATCAGAAAGTCAGTTGGAAGACGCATATGAAATCATATCATCCGGAATTGGTGAACTTTTAA
- Protein Sequence
- MAAKTSEWRPGPTVCRCCLSEGCYKDISTEYFWMGKREVYAEMLSETFDLSIAYSQSGGPNSNSRLICEPCISRLRDAADFKRQIAYSQSGGPNSNSRLICEPCISRLRDAADFKRQVVECEKTFLQHLDPSSSSIDAIKVDDQPLTKLASKVPKKESVDLLDLIDNAKVAEKRKSAVKVKATPIKKVKLSKETKASASKAKPEKKKKVDDQPLTKLASKVPKKESVDLLDLIDNAKVAEKRKSAVKVKATPIKKVKLSKETKASASKAKPEKKKKVTEEEPLEEEKEVKLEQVKIEKVGSDEEFDDLPNFGDDDDDDDDDKESDPVRRNAEMLIKYTSASPFRVNVKTIMCVYCGDLFEDPDEFRAHMVHEHETFRVTMAFARLPKTEYVKIDITDLRCRLCRHMYKDLVQIGEHLKIAHGKDVRTDSPLGVMPYLLDKNNWNCAVCGKNLPSLLHLNKHTVTHFLSYVCEICGKSYIASTGLLTHVRSKHEKEYSAYCKRCQVIFPSMKAKQIHQRTSKHCMTHCCPECPERFPSYEYKQRHMVSAHGMTRKEYSCTRCPLSFNHRQAFYDHFKKSHSVDCVICMHCGHKFASASKLNRHMTKHATNAKLLLNSVTAYPFRVRDKSYVCVYCREVYTDPEVFKMHMGDDHGTFDLKLAFHKMPKTDYIKADISEMRCRLCDHMLKDLNTAAEHLKTVHDMPIELDANFGIMPFNLQRNLYVCAICQMKMPSLTIICRHTLTHFLAYACKLCGLGFATTTAMLKHERGKHQAIETKCRKCDQIFPNEEAKHRHKRMSQTCLPYVCMVCAQRFIDQKAKTRHMQEQHGVGSKDEYECVECSLMFTEEKEYYMHLKLEHSLETAICKKCGLKFTSTHALKHEEEIDGYSGDFSVLDLTVDVVRRNAELLLNSVTAYPFRVSDKSYVCVYCREVYTDPEVFKMHMGDDHGTFDLKLAFHNMRKTDYIKADISDMRCRLCDHMLKDLNTAADHLKTVHGVPIELDVNFGIMPFNLQRNLYVCAICQMKMPSLTIICRHTLTHFLAYACNLCGLGFATTNAMLKHERGKHQAIETKCRKCDQIFPNEEAKQRHRRISQTCLPYVCMLCSQRFIDQKAKARHMQEQHGVGSKDEYECVECSLMFTEEKEYYMHLKLEHSLETAICKKCGLKFTSTHALKLVQWLVARNNAKVILKYTTVYPFRLPGDSLVCVYCCEVFDDPKDYRAHHDMEHTSFHVDTAFGHVFTNYNEYLKVDCFDLKCRLCFENFETINSIAEHLAQSHSIKINLKTEIGMQMFKLGSEKWVCAICGRKLPCLRALSRHTSCHYHKFTCETCGKSYLSRENLTKHFAYSHSGYKICLRCKETFPSCEARREHILASMSCWPFGCNICGQRFAGKKIKMEHLVEVHGIGPKVYNCPECDKSFDRWRSYHSHFVVAHTTNAYACSFCEHKFDDKKRFLDHIIVHTKEKAFPCTVCSKSFGRKKNLMQHMWIHKEQKRFECNLCNKQFNQKVSWKTHMKSYHPELVNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -