Basic Information

Insect: Sericinus montela
Gene Symbol: -
Assembly: GCA_029286605.1
Location: JAGSMR010000118.1:446497-452673[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.12 11 7.3 1.7 1 23 62 85 62 85 0.89

2 27 0.36 34 5.7 0.1 2 23 112 134 111 134 0.94

3 27 0.007 0.66 11.1 3.1 2 23 157 178 156 178 0.96

4 27 0.4 38 5.6 3.4 1 23 182 204 182 204 0.97

5 27 0.71 67 4.8 2.7 1 19 209 227 209 229 0.88

6 27 0.00055 0.052 14.6 4.4 1 23 239 262 239 262 0.94

7 27 0.0096 0.91 10.7 3.7 2 23 270 292 269 292 0.96

8 27 7.5 7.1e+02 1.6 1.3 1 23 371 394 371 394 0.89

9 27 0.28 26 6.1 0.1 2 23 421 443 420 443 0.94

10 27 3 2.8e+02 2.8 5.6 2 23 466 487 465 487 0.96

11 27 0.14 13 7.0 1.0 1 19 491 509 491 513 0.87

12 27 0.012 1.2 10.3 0.3 1 23 518 541 518 541 0.95

13 27 0.0073 0.69 11.1 1.6 1 23 547 570 547 570 0.95

14 27 0.006 0.57 11.3 0.7 2 23 578 600 577 600 0.96

15 27 0.00046 0.043 14.9 2.5 1 23 606 628 606 628 0.97

16 27 3.9e-05 0.0037 18.2 1.4 1 23 634 657 634 657 0.98

17 27 2.8 2.6e+02 3.0 0.4 1 9 663 671 663 674 0.87

18 27 0.0033 0.31 12.2 0.2 3 23 731 752 729 752 0.89

19 27 0.044 4.2 8.6 1.0 2 23 778 800 776 800 0.92

20 27 0.00066 0.062 14.4 0.2 2 23 823 844 822 844 0.97

21 27 0.0066 0.62 11.2 2.3 1 23 848 870 848 870 0.98

22 27 0.0028 0.27 12.4 3.1 1 23 875 898 875 898 0.96

23 27 0.93 89 4.4 1.3 2 23 906 928 905 928 0.76

24 27 0.00065 0.062 14.4 1.3 2 23 936 958 935 958 0.96

25 27 0.00042 0.04 15.0 4.7 1 23 964 986 964 986 0.96

26 27 2.6e-05 0.0025 18.8 2.0 1 23 992 1014 992 1014 0.96

27 27 0.00018 0.018 16.1 2.4 1 23 1020 1043 1020 1043 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.12	11	7.3	1.7	1	23	62	85	62	85	0.89
2	27	0.36	34	5.7	0.1	2	23	112	134	111	134	0.94
3	27	0.007	0.66	11.1	3.1	2	23	157	178	156	178	0.96
4	27	0.4	38	5.6	3.4	1	23	182	204	182	204	0.97
5	27	0.71	67	4.8	2.7	1	19	209	227	209	229	0.88
6	27	0.00055	0.052	14.6	4.4	1	23	239	262	239	262	0.94
7	27	0.0096	0.91	10.7	3.7	2	23	270	292	269	292	0.96
8	27	7.5	7.1e+02	1.6	1.3	1	23	371	394	371	394	0.89
9	27	0.28	26	6.1	0.1	2	23	421	443	420	443	0.94
10	27	3	2.8e+02	2.8	5.6	2	23	466	487	465	487	0.96
11	27	0.14	13	7.0	1.0	1	19	491	509	491	513	0.87
12	27	0.012	1.2	10.3	0.3	1	23	518	541	518	541	0.95
13	27	0.0073	0.69	11.1	1.6	1	23	547	570	547	570	0.95
14	27	0.006	0.57	11.3	0.7	2	23	578	600	577	600	0.96
15	27	0.00046	0.043	14.9	2.5	1	23	606	628	606	628	0.97
16	27	3.9e-05	0.0037	18.2	1.4	1	23	634	657	634	657	0.98
17	27	2.8	2.6e+02	3.0	0.4	1	9	663	671	663	674	0.87
18	27	0.0033	0.31	12.2	0.2	3	23	731	752	729	752	0.89
19	27	0.044	4.2	8.6	1.0	2	23	778	800	776	800	0.92
20	27	0.00066	0.062	14.4	0.2	2	23	823	844	822	844	0.97
21	27	0.0066	0.62	11.2	2.3	1	23	848	870	848	870	0.98
22	27	0.0028	0.27	12.4	3.1	1	23	875	898	875	898	0.96
23	27	0.93	89	4.4	1.3	2	23	906	928	905	928	0.76
24	27	0.00065	0.062	14.4	1.3	2	23	936	958	935	958	0.96
25	27	0.00042	0.04	15.0	4.7	1	23	964	986	964	986	0.96
26	27	2.6e-05	0.0025	18.8	2.0	1	23	992	1014	992	1014	0.96
27	27	0.00018	0.018	16.1	2.4	1	23	1020	1043	1020	1043	0.98

Sequence Information

Coding Sequence: ATGTTAAAAACATGGGAAAATATAGATAGAGTTAATCCTATTAAAGATACAGAAAAACAAGAAGAGCTAGTATCTATAGAAGGCGTTAGAAGAGGAACGGAAATAGAGAGGCAGCGAATGAATATAAACCAGATATTGAATAATTCAAATGCAACACCGATCAGGTGTCGAGGCAGTACAGGCTACGCGTGCTGTTACTGCAATAATCGATATCAGAACCCCGCTGAGCTGAAACAGCACAGCATAGAAAAACACGAGAATATCAACGAAACGAAATACATGAAGCGTATGGACAAGAACAAGTTCAACGTCAAAATGGACATCACCGATCTGCGTTGTAAATTGTGCGATACGTCCATAGACACGATAGAACTCTTCCTGGAGCACCTGAGAGACGTACATAAGAAGAAGGTGTTTACCGATATCAAGATTCAACTGATCCCATTCAAATTTGAAAGCGACGATCTGAGATGTTGCATTTGTTTTAAAGTCTATTCAAAATTCCAATCACTTCAGCTGCATATGAACGAACATTATAGTAATTACAAATGTCATGAGTGTGAAGCGGGCTTTGTCTGTCAGGCACAGTTACACGAGCATTCCCAGATTCATAAGTTGGGCACATTCAACTGCGACTTCTGCTCTAAAGCCTTCAGTACGTTCCGTAAAAAGAGAAGCCACGAAAAGTGCGTTCATTCGCAGAACGAACTAAAGTACAAATGCACGTATTGCGAGAAGAAATTCAAACATTACAGACAGAGGGAGAGGCATATGGCCGATGTGCACAAAAATGCCTTCCCACCTCAGAAATGCCAAGCTtgcaataaacatttttacacCCAAAACAGTTTGAGCATCCACGTGAAGAGATTTCACTTGGTTCAGAGGCCGCACAAGTGTTTATCGCGTACAAAAATCGCTAAGCTCAAAAGACAGACAACGTTTGAAATTGAACACGCGGACAAGGAAAAGGAAATCAATCATACAAAAGTGAAGTCTGATTTGCCTAAAACGAAACATGGCGAAGAATTAGAAAAACATCGTACCAATGTTAGAGAGATACTGTTGTGGTCGAATGCTACGCCGATCCGATGCAAAGGTGGTATCGGCTACGCTTGCTGCTTCTGTTCCGATCAATATCCTGAACCAAAAGACTTGAAGAGGCATTCCTTAAATGATCATGATAGCACTGCCATATCCACATTCATGAAAGGCAGAGACATGCACGGTTATTTCGTAAAGCTGGACATAACGGCGCTCAGTTGCAACATATGCAAAATGTCCATCGAGACCTTGGAGCAAGTAATGGAACATCTAAAGAATATTCACGAGAAGAACATAGATATGAATATAAAGAATCATATAATACCGTTTAAATTCGACACGGAAAGTCTTCGGTGTTGCATTTGTCTAAACGCTTTTCACAAGTTCCACGCACTCCAAGTCCACATGAATAATCACTGCAGgaactatgtatgtgatgtctgcGACGCGGGGTTTGTGAACAGGCACATGCTGCGTTGCCATAGTGACGGACATAAGATCGGTAGTTTCGCCTGCGAGCAATgcccaaaaatatttaaaacgattCGCTTGAGGAAGCTGCACGAACGCATCGTTCACGGTTCGAACATGCCACACAAATGTGGGTACTGCAACGAGAGGTTTAAAGAGAATTGGAATAAAAATGAGCATCTAGCGAGGGTGCACGGGGTAAGAGGGCCAGGAGTGAAGTGTCAAGCGTGCGATAAAACCTTCGAATCTCAACAGAGATGGTTGCTACACATGAAGAGGGATCACTTAATGCAAAGACAACACAAGTGCAGTAGATGCGACAAAGCGTTTTATGCGAAACGGGAACTTACTGATCACATGGTGAAGCACACCGGATTGAGAGAGTTCAGATGTGAAGTGTGCACAAAGACGTACGGACGATTGAAGACTTTGAAAGAACACATTCGAAGACTGCACCCGAATGATGATAGATTCAAATGCCCTTATTGCAGCTGGACAGTAATCAAAATAGAAACGGGAAATGCTAAACCGGTGGAATTGAAGTTTATATCCAAGAAAATTGATAGGAGTAGCACGTTACTCTCGGAGGCGAAGAAAAACCAACACAATCTGagtataattttactaaattcCAACGCCAACCCGATAAGATGCAAAGACAGCTTCGGATATGGCTGCGCTTTCTGTCCCAAACAGTTCCCGCAACCGACCGACCTGAAGAAACATTTCCTAGACGAACACAACAGTGACCgattcataaaatttatgtcgAATAAACTTTTCGAAAACATTGTCAAACTTGACATCACATACTTGTGCTGTGCGCTCTGCGACACAGATTTCAATCAACTAGATGACTTTGTTCTCCATTTGAAAAATAACCACGACAAGGACCTTCATATCGATATTAAGAGTCAAATTTTGCCGTTCAGGTTCGACACGCCGGAGTTAAGATGCGCCATATGTTCAGCTGAGTAcgctacatttaaaaatttacaggaACACATGAACACACACTTTGGGAACTATCATTGTACTATATGTGGTGGATGTTATGTAACAGAGCGACTATTGCAAGGGCACGTTAAGCGCCACGGTAGTGGGGAATACAAGTGCACTCAATGCGATAAAATGTTCACTAGCGAACGAAAGAGACGTGAACACGAACAAAGGACTCATCTTGGGTTCAACAAGAGAAATAAATGTCACTACTGCGACGAGAGATTCCTTGATTATTGGAAGAAGGTCAGTCATATGGTAAAAGTTCACGGCGAGCCAGAAGTAATATTGAAATGTCAAGCGTGCGAGCGTACGTTCAATAATCAGAGGGCTTTGGCGAGACATAAGAAGAAGGACCACTTATTGGAGAGGAGGCACAACTGTCCCGAGTGCGAGATGAAATTCTTTAGTAGTAGTTGCCTTAATAAGCACATGGCGAAACACACGGGTCTAAGGCAATATTTGTGCGAGGTGTGTCACAAGTCTTACGGTAGAAGGAACACACTAAGGGAACATATGCGTATACATGCGGACGATCGACGTTTCAAATGCGAACAATGCGGGCAAGGGTTCGTGCAGAAATGTAGCTGGCGTGGTCACATGCGGTCGAAGCACGGCGAAAACGTTTAG
Protein Sequence: MLKTWENIDRVNPIKDTEKQEELVSIEGVRRGTEIERQRMNINQILNNSNATPIRCRGSTGYACCYCNNRYQNPAELKQHSIEKHENINETKYMKRMDKNKFNVKMDITDLRCKLCDTSIDTIELFLEHLRDVHKKKVFTDIKIQLIPFKFESDDLRCCICFKVYSKFQSLQLHMNEHYSNYKCHECEAGFVCQAQLHEHSQIHKLGTFNCDFCSKAFSTFRKKRSHEKCVHSQNELKYKCTYCEKKFKHYRQRERHMADVHKNAFPPQKCQACNKHFYTQNSLSIHVKRFHLVQRPHKCLSRTKIAKLKRQTTFEIEHADKEKEINHTKVKSDLPKTKHGEELEKHRTNVREILLWSNATPIRCKGGIGYACCFCSDQYPEPKDLKRHSLNDHDSTAISTFMKGRDMHGYFVKLDITALSCNICKMSIETLEQVMEHLKNIHEKNIDMNIKNHIIPFKFDTESLRCCICLNAFHKFHALQVHMNNHCRNYVCDVCDAGFVNRHMLRCHSDGHKIGSFACEQCPKIFKTIRLRKLHERIVHGSNMPHKCGYCNERFKENWNKNEHLARVHGVRGPGVKCQACDKTFESQQRWLLHMKRDHLMQRQHKCSRCDKAFYAKRELTDHMVKHTGLREFRCEVCTKTYGRLKTLKEHIRRLHPNDDRFKCPYCSWTVIKIETGNAKPVELKFISKKIDRSSTLLSEAKKNQHNLSIILLNSNANPIRCKDSFGYGCAFCPKQFPQPTDLKKHFLDEHNSDRFIKFMSNKLFENIVKLDITYLCCALCDTDFNQLDDFVLHLKNNHDKDLHIDIKSQILPFRFDTPELRCAICSAEYATFKNLQEHMNTHFGNYHCTICGGCYVTERLLQGHVKRHGSGEYKCTQCDKMFTSERKRREHEQRTHLGFNKRNKCHYCDERFLDYWKKVSHMVKVHGEPEVILKCQACERTFNNQRALARHKKKDHLLERRHNCPECEMKFFSSSCLNKHMAKHTGLRQYLCEVCHKSYGRRNTLREHMRIHADDRRFKCEQCGQGFVQKCSWRGHMRSKHGENV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -