Smon002879.1
Basic Information
- Insect
- Sericinus montela
- Gene Symbol
- ZFX
- Assembly
- GCA_029286605.1
- Location
- JAGSMR010000007.1:8477855-8484441[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 1.1 1.1e+02 4.2 3.1 1 23 249 271 249 271 0.96 2 22 0.89 84 4.5 0.0 3 23 312 333 311 333 0.94 3 22 0.012 1.2 10.4 2.4 1 23 505 527 505 527 0.96 4 22 0.0003 0.028 15.4 2.0 2 23 534 556 533 556 0.92 5 22 8.1e-07 7.6e-05 23.5 1.1 1 23 562 584 562 584 0.99 6 22 5.6e-06 0.00054 20.9 2.7 1 23 590 612 590 612 0.97 7 22 0.002 0.19 12.8 0.6 1 23 618 640 618 640 0.98 8 22 0.00041 0.039 15.0 4.6 1 23 646 668 646 668 0.96 9 22 0.0001 0.0098 16.9 2.8 1 23 674 697 674 697 0.96 10 22 1.5 1.4e+02 3.8 0.5 2 23 769 789 769 789 0.95 11 22 1.1e-05 0.0011 19.9 0.3 1 23 795 818 795 818 0.96 12 22 3.4e-08 3.3e-06 27.8 1.7 1 23 824 846 824 846 0.98 13 22 0.00028 0.026 15.5 0.2 1 23 852 874 852 874 0.99 14 22 0.00012 0.011 16.7 0.2 1 23 880 902 880 902 0.97 15 22 0.0014 0.13 13.4 0.9 5 23 911 929 909 929 0.96 16 22 0.0031 0.29 12.3 2.5 2 23 986 1006 985 1006 0.97 17 22 0.001 0.097 13.7 0.5 2 23 1150 1172 1150 1172 0.96 18 22 2.3e-05 0.0021 19.0 0.3 1 23 1178 1200 1178 1200 0.97 19 22 0.00012 0.011 16.7 0.6 3 23 1208 1228 1208 1228 0.98 20 22 0.02 1.9 9.7 2.4 3 23 1236 1256 1234 1256 0.96 21 22 0.00028 0.027 15.5 2.1 1 23 1262 1284 1262 1284 0.97 22 22 0.00017 0.016 16.2 0.4 1 23 1289 1312 1289 1312 0.96
Sequence Information
- Coding Sequence
- ATGAACACGAACACTGAACAAATATTCCTTTTGAATAGTTCAGAAAATCAGTCTGTAATTGCAACGCAAAAAGTTACCGAATTAAACAATACAAGTCCAGTAAACCTCGAgaATGTCGAAGATTTCTCGAATGTGTGTCGTACATGCGCAACTATTACAGAATTTGTTATACCGATCTTCATGGGAGAAGGCTTACAGAATAACCTAGCTGATAAGATACATGAACATTTACCAATAAAGgtATCAGAACAAGATCTCCTACCGCAAGTGGTATGCTACCAGTGTGCCAGTACCCTATTGGCATGGCATGAACTTGTAAAATGCTGTGTACAAGCAGATACAGCTCTTAAGACTCGCCTATCTGTAATTCATGCTAAACAAAAAAGTGCATCTTATGATGCAGGAGAATGCTCGGATAAGGAACCAAAAGCAAAATCTAGAAACTCGATACAAGTAACAGATATTAGAGATATATTAATGAGACATTTCCAATTATCCGACCAGGATTTGGATAATTCAGGTTTAGAGTTTGTTTGTGAAAAATGTGAAAATCAATCTAATTTACCAACACTGCAGAGCTTTCTTGAACATTTAAAGTCACAGCacaatatcaaattaaataccAAAATGTCTGTAgaatgttttataaaagaatatgtaTCGGTTGTTGAGACTCTGGTTACTGAAGATGAGACAATTGGTGAAGAACTAGAGAAAGAAATGACAGATGTGAATATACCGAGATTCTGTTGTCCGTACTGTGCTAGCGCATTTTCTTCCGCCGCGCGTCTCACTTGTCATCTGAACAAACATGTTAATGTCAATATTGATGACGGCTTGGCATGCTGTGATAATGTTTATAACGATTGGAAATTCTTCGTGACACATCTACAAGAACAACATCTAAGTTGTTCAAATAGCGAAACAAATATTTGCCAAAGCTGTGGTTTCGTTGCCGATGACGTTGACGCACTCCAGGCCCACATAGCTATTAAACATGAAGTTATAAATTCTGACACGCACCACCGCAAAGAAAGGACGAGTAACAGTGATAAATGGACGCCCAACTGCGTCACCTTGGATCAATATTTCGATTTGAATGAACACGGTACGGAATCGCAGGATTATGCCAAGAAAGATGAAAGCCTTGATTCCTGGACCAAGGAAAATGAATGCCTCGAAATAGATGAAGACACTGAAGGTGATGATGACCAGCCACTAGCTACAATTGCGTCAAAAAAATCAACAGACCTatacaacaatttttataatgccCTTGTTAACTTTAGAAATCACTTTGTTAAAAAACACAAAGAGAAAAAGTGCGAATATCCCGATTTTACAGATTCAAGTGATTCTGAAGAGATTGTCGAAGAGGATAGAACCGATGATGATGAGGATGTGAACAAATTCGATGATTTAACCCAATGCAATATGCGGAAAGATCGGATGGACGAAGAAACCAGGCTAGAAATAAGTAGGGTGCAGACGAAAATCAATGGGAAGGTTTTCTTCGAGTGCAAAATATGCGGGAAGAAATTAAGCTCCCCACATacgtacatatttcataaaagaaTACACACTGGGGAGAGGCCTTGCGTGTGTCATATATGCGGGAAGCAGTTTCGTGCGCCGAACGGTTTGCAGCGACATTTGACGGAAACGCACGAACGCGCTCGTCGTTACACTTGCACGTTATGTCCAAAGAACTTCGCGAACACGCAAAACCTGAAGCAACACATGCGTATTCATACCGGCGAGCGGCCATTTGCATGTACGCAATGCGACAAGAGGTTCACTCAGAGCGGATCGCTGCATGTACATTTGAAGACTCACAGCGATCAATTTCCGTTCCAATGCGCGGAGTGTGGGGCCAAGTTTCGATTGCGTTTGGGTCTTACGAGGCACAAGTTGAAGCATACCGGTGAACGCCCGCACGTCTGTGTGCATTGCGGCAAAGGTTTCCGACAGAAGCACGACCTTTACAGCCATGCGCTGTCTCACACCGACCCCAAACCGCACGTATGTAACATATGCAACGCCGCTTTCAGGCAACAGAGGGCGCTGAAACATCATCGCAACAGAGTGCACCCGAACGAATCTTCTAGAGACGTCGCGAATCATTTAGTTTTCAATCATGTCGGACAGTATCATTCaatattgaatgaaataaaaattgaggTTATAGtggaaaattttaatgaattagaGAGTTCCTCCCCTCGAACTGAAATTAAAGAGGAAATTCATGATCCCATAAAGAAACCCTTAACAATAGTAGACGAAGACGGCAAGAAATATGCGCAATGCAGTGTATGtcaaaagaaaatatcaatCGCTTCGTGGAAACGTCACGCAAGATCGCACTTGGGTGAGAAGAGGTACAGCTGCCACACTTGCGGTTTAGCGTTCGGTGATAGTGGGAACCTGGCCCGCCATAGGAGAGCCCTACACGCCAACTACCGTCCGTTTTCTTGTCCAATCTGCGACAAAACGTTCACCAGAAGCGGCCATCTTCAAGATCACATCAAATCACACTCGGACAGTAGGAACTATGTTTGTGACGTATGTGGTAAAGCGTCAAAGTCCGGAACAGCTCTGCGGATGCACAGGAAGACTCACGAGATAGAGCACAAGTTCGAATGCATGGAGTGCGGTTCCAAATTCAAAAGACGCGGTGAACTGACGGCCCACGTCACTGTGCACACGGGTGAGAAGGCTCACTCGTGCTGGTGCGGCAAATCGTTCCGCCTTCGAACCCAACTCACGGCGCACGCCAAAACACACGACGCGccGCTCAAGGATATCACGGAATTTGTAGTACAGGCCAAGGAGAGCACGCAATATGACACTGCCAACAGTTCCATAGAGAAAACTTGCGACTATTGCGGCATCAAACAGCCCGCGGAATTGTACGCGGATCATCTGATTACCGTGCATTCGGAACTAAAGATCCGTTGCAATGAGTGTGATAGACATTTTGATAGAAAAGAATTTATAACACACATGTCCATGCATGATATTCATTATGCCGCAAAGAACGATAAAAAGACAGCTCCGATGAAAGCAAAGAAGTTAAGAAAAAGGAAGAGTAGCAAAGACAAAAATCAAAAAGCAACTAGCGACCCGAAATCCAAATCGTCACAGGAGGAGATTGTTGAAAAGGCAATAAATAACAACCAGAAAGATAATAAATACGACACTGATATTGTAGAAAATGAATTTTCGGATCACAGTGACGTGGAGTACTTTGGACGTTTGCCGGAGTCTGTATTCGAAGCAATAGAAGACTCGCAGGACATCCAAGCTGAATATAACGGAGATCACTCATCACCGACACCcgaaaataatgaaagaattGAAAACAACGATAACACTGACGAGTCTAATGAATCTGTCAGGGTCATACCTAACCGACCGCCTTGCAAGAAGCACAGGAAACCACGCACCTGTCCCGTTTGCTCCAAAGTGTACTCGGCATCATCGAGCTATTTCTATCATATGAAGAACTCTCACCAGCAGATCAAGGAGCACGAGTGCGACGTGTGCGGCAAACGGTTCGGCAATAAGGGCAGTCTAGCGCAACACGTGTCCGTACACACGTCCGAGCGTCGCTTGGGATGTAGAGAGTGCGGGAAGAGATTCCGTACCAAGGCGAGCCTGTACATCCACGAACAGATACACAGCGACGTGAGGAGCTGGGCCTGCAGCCAGTGCGCGAGGTCGTTCAGGTGGCGGACGCACTTGCTGAGGCACTTGAAACGCCATTCGGCGGTGAAATCGCACGTTTGCGCCACATGTGGGCGTGGCTTCAGCGTGCGCTGCGACCTGCTGCGGCACGCGCGCACGCACGCCGCGGGCTGCTTCGCGTGCGAGCAGTGCGGCCTCGAGTTCGCACAGCAAAGGTATTTGAAAGTACACGTACAGAAGAAACacgatattaataaaacaaattga
- Protein Sequence
- MNTNTEQIFLLNSSENQSVIATQKVTELNNTSPVNLENVEDFSNVCRTCATITEFVIPIFMGEGLQNNLADKIHEHLPIKVSEQDLLPQVVCYQCASTLLAWHELVKCCVQADTALKTRLSVIHAKQKSASYDAGECSDKEPKAKSRNSIQVTDIRDILMRHFQLSDQDLDNSGLEFVCEKCENQSNLPTLQSFLEHLKSQHNIKLNTKMSVECFIKEYVSVVETLVTEDETIGEELEKEMTDVNIPRFCCPYCASAFSSAARLTCHLNKHVNVNIDDGLACCDNVYNDWKFFVTHLQEQHLSCSNSETNICQSCGFVADDVDALQAHIAIKHEVINSDTHHRKERTSNSDKWTPNCVTLDQYFDLNEHGTESQDYAKKDESLDSWTKENECLEIDEDTEGDDDQPLATIASKKSTDLYNNFYNALVNFRNHFVKKHKEKKCEYPDFTDSSDSEEIVEEDRTDDDEDVNKFDDLTQCNMRKDRMDEETRLEISRVQTKINGKVFFECKICGKKLSSPHTYIFHKRIHTGERPCVCHICGKQFRAPNGLQRHLTETHERARRYTCTLCPKNFANTQNLKQHMRIHTGERPFACTQCDKRFTQSGSLHVHLKTHSDQFPFQCAECGAKFRLRLGLTRHKLKHTGERPHVCVHCGKGFRQKHDLYSHALSHTDPKPHVCNICNAAFRQQRALKHHRNRVHPNESSRDVANHLVFNHVGQYHSILNEIKIEVIVENFNELESSSPRTEIKEEIHDPIKKPLTIVDEDGKKYAQCSVCQKKISIASWKRHARSHLGEKRYSCHTCGLAFGDSGNLARHRRALHANYRPFSCPICDKTFTRSGHLQDHIKSHSDSRNYVCDVCGKASKSGTALRMHRKTHEIEHKFECMECGSKFKRRGELTAHVTVHTGEKAHSCWCGKSFRLRTQLTAHAKTHDAPLKDITEFVVQAKESTQYDTANSSIEKTCDYCGIKQPAELYADHLITVHSELKIRCNECDRHFDRKEFITHMSMHDIHYAAKNDKKTAPMKAKKLRKRKSSKDKNQKATSDPKSKSSQEEIVEKAINNNQKDNKYDTDIVENEFSDHSDVEYFGRLPESVFEAIEDSQDIQAEYNGDHSSPTPENNERIENNDNTDESNESVRVIPNRPPCKKHRKPRTCPVCSKVYSASSSYFYHMKNSHQQIKEHECDVCGKRFGNKGSLAQHVSVHTSERRLGCRECGKRFRTKASLYIHEQIHSDVRSWACSQCARSFRWRTHLLRHLKRHSAVKSHVCATCGRGFSVRCDLLRHARTHAAGCFACEQCGLEFAQQRYLKVHVQKKHDINKTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -