Smon010693.1
Basic Information
- Insect
- Sericinus montela
- Gene Symbol
- gl
- Assembly
- GCA_029286605.1
- Location
- JAGSMR010000030.1:11316229-11347191[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.00014 0.32 11.6 0.4 16 40 234 255 228 258 0.87 2 7 0.0053 12 6.6 0.1 12 38 298 325 288 325 0.76 3 7 0.016 37 5.0 0.1 18 38 332 353 328 353 0.85 4 7 0.016 37 5.0 0.1 18 38 360 381 356 381 0.85 5 7 1.5e-05 0.035 14.7 0.9 19 41 463 482 458 484 0.91 6 7 0.3 6.9e+02 1.0 0.1 18 41 490 510 487 512 0.82 7 7 0.0091 21 5.8 1.0 9 38 510 539 502 539 0.75
Sequence Information
- Coding Sequence
- ATGGATTGTTACATGCCCAACAATCCCCAGTACGGGCTCGTGGAGTACTGCCCCGGCTGCCACGGCCTCTGCTGCGACCCTCTGCAGCCCTGCAGCTGCGTGGAGCAGGTCCGCGAGTTCCCGGAAGACGAGTGCTGCCAGCAAGAGAACGAAAATTGCTGTCAGGAGAATGGCGAGGAGCTGAACGCGCTGACCGAGTCCATCGCTCCGTGCGATGTGAACCTCGACCCAGGCGGCGAGGGCGGCTGGCCCGCCGACGACATGGGCTCCTTCTCACTGCCACCGCTGGAGCTCGACCCACTGCCCTCTCTGTTCCCTTTCTCACCGTGCTCCGGATATAACAGGAATAATGGGGGTGAATGCCGGGAGAGGGGTGGTGGGGAGGCGGCGGACGTTCTCCTCTCATTGAAACACGCCGTGGTTCATGGAGACTGCGCTTCGGAGGCAGTCCACCCACAGATGATGGTGAATGGCGGTGGTGGTTACCCGTACTACGAGCACTACGGCAGCACTCCACTCTTCCCCACGATGAGCGTCAACGTCTCCATGAACATGACCATGCACGGTTGTCCACCTGACCAGCTCTGTTCTCAGGAGCAAGCCGTCCTAGGCATCCCGCCTCGGGCGGCTAGCGCGGGTTGGTGCGAAAGCATTTCAATGGCCATGCCAATATGCGGCGATGGCGCAACACCATCTGTCTTTTGTCGATGTCGATCGTGTAAGAACGCTTTTTCTGACAGCTCGACTTTGATGAAACATCTGAggataaactccggtgaaaatCCATATCAATGTAAATTATGTTTACTCAGaGCAGAAGCCGAACCTGTGCCGCATCTGCGGCAAGACGTACGCGCGTCCGAGCACGCTGAAGACGCACCTGCGCACGCACTCCGGCGAGCGGCCCCAAGGTGTCCGATTTGCGACCGACGCTTCAGCCAAAGCTCCAGCGTAACTACACACATGCGAACTCATTCTGGGGAACGGCCGTATCAGTGTCCGATTTGCGACCGACGCTTCAGCCAAAGCTCCAGCGTAACTACACACATGCGAACTCATTCTGGGGAACGGCCGTATCAGTGTCCAATTTGCGACCGACGCTTCAGCCAAAGCTCCAGCGTAACTACACACATGCGAACTCATTCTGGGGAACGGCCGTATCAGGTGGTCGGGGAAGGGGAGGATATATTCTGTCCTGAGGAGCAAGCCGTCCTAGGCATCCCGCCTCGGGCGGCTAGCGCGGGTTGGTGCGAAAGCATTTCAATGGCCATGCCAATATGCGGCGATGGCGCAACACCATCTGTCTTTTGTCGGTGCGAGGCCGACATCACACGTTTAGGGCTTGTGCCTCCTCGGGGGCCTGGTATACATATGAAGCCGAACCTGTGCCGCATCTGCGGCAAGACGTACGCGCGTCCGAGCACGCTGAAGACGCACCTGCGCACGCACTCCGGCGAGCGGCCCTACCGCTGCCCGGACTGCAACAAGAGCTTCTCGCAGGCCGCCAACCTCACCGCGCACGTGCGCACACACACCGGCCAGAAGCCCTTCAGGTGTCCGATTTGCGACCGACGCTTCAGCCAAAGCTCCAGCGTAACTACACACATGCGAACTCATTCTGGGGAACGGCCGTATCAGTAA
- Protein Sequence
- MDCYMPNNPQYGLVEYCPGCHGLCCDPLQPCSCVEQVREFPEDECCQQENENCCQENGEELNALTESIAPCDVNLDPGGEGGWPADDMGSFSLPPLELDPLPSLFPFSPCSGYNRNNGGECRERGGGEAADVLLSLKHAVVHGDCASEAVHPQMMVNGGGGYPYYEHYGSTPLFPTMSVNVSMNMTMHGCPPDQLCSQEQAVLGIPPRAASAGWCESISMAMPICGDGATPSVFCRCRSCKNAFSDSSTLMKHLRINSGENPYQCKLCLLRAEAEPVPHLRQDVRASEHAEDAPAHALRRAAPRCPICDRRFSQSSSVTTHMRTHSGERPYQCPICDRRFSQSSSVTTHMRTHSGERPYQCPICDRRFSQSSSVTTHMRTHSGERPYQVVGEGEDIFCPEEQAVLGIPPRAASAGWCESISMAMPICGDGATPSVFCRCEADITRLGLVPPRGPGIHMKPNLCRICGKTYARPSTLKTHLRTHSGERPYRCPDCNKSFSQAANLTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGERPYQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01337902;
- 90% Identity
- iTF_01337902;
- 80% Identity
- iTF_01337902;