Basic Information

Transcription Factor Domain

TF Family: COE
Domain: COE domain
PFAM: AnimalTFDB
TF Group: Helix-turn-helix
Description: This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 4.2e-42 5.8e-38 131.2 0.0 229 294 1 82 1 86 0.98

2 2 0.0055 75 2.0 0.2 447 477 81 111 80 118 0.78

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	4.2e-42	5.8e-38	131.2	0.0	229	294	1	82	1	86	0.98
2	2	0.0055	75	2.0	0.2	447	477	81	111	80	118	0.78

Coding Sequence: ATGTTCGTACACAATAACAGCAAACATGGGCGGCGAGCCAAACGACTGGACCCGTCTGAAGGTACTGACGCCGCGCCTGACAATAATTGGCTGTACCCACCGTTACCAGTTGCAACGCCTTGTATCAAGGCTATTTCACCCAGTGAAGGTTGGACCTCAGGCGGATCCACTGTAATCATAGTAGGGGATAACTTCTTCGACGGTCTACAAGTTGTATTTGGTACTATGTTAGTTTGGAAAGAGTACGCGCGCAGCGGCGGCTCGGTGTCGCCCCGCTACTGCGCAGGCGCGGCGACGCCGCACTACGCGCAACATTACGCGCCGCCCACCTCACTTTTCAACTCCACATCAAGTTAG
Protein Sequence: MFVHNNSKHGRRAKRLDPSEGTDAAPDNNWLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWKEYARSGGSVSPRYCAGAATPHYAQHYAPPTSLFNSTSS

Sequence clustering based on sequence similarity using MMseqs2