Smon009773.1
Basic Information
- Insect
- Sericinus montela
- Gene Symbol
- Jarid2
- Assembly
- GCA_029286605.1
- Location
- JAGSMR010000028.1:43876-82580[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-14 1.8e-10 41.7 0.0 6 63 885 942 881 960 0.90 2 2 1.1e-20 2.9e-17 63.4 0.0 6 89 1002 1082 998 1082 0.93
Sequence Information
- Coding Sequence
- ATGGCTATGGTAAATGAGCACTGGCACGCGCACAAATCAGATCTTCATCCACACTTGCAGCCTGTAGTGGTAGTTGAAAGGCTCAAGACTACTCCTGTAAGTAATACCATAGTAATGCCTAAAAGAAAAAGTGATGCAACAGGGAAAGATGAAAACATACCTGTAAAGAAACCAATggtaactaataaattaaacatgcaATTAAGATCACAAACAAGGAAGTTACAAGGAAAAATCGCTAAAAACCAGAATTTCGGAGATAAGAAAACGAATTTACAACCAAATAATCCAGACTTCGTTTTAGTAGATAATCGACCTAGCACATGTTTCACTAAAAAGACAGCATCAAGGAAAAGAAAAACTACAACAGGTGTTAAAGCTAACGGCAAATCAAAACCACAActtccaccgccaccaccatcACAACCAcctacaccaccaccaccatcaCAACCAcctacaccaccaccaccaccgccagAAGAATCTGCAGTTTCTATAAGCAGCGATGATAAACCTCCagaaaagaaaggaaaaagtTCACCAGTTCCAgcatTGTACTACTCTCCGGACCAGTCAAATATTGAACTCGATAGGGATGCTACCGATAAATTACCTACACATTATAGTTTTAATGAAATTGATCGGTGGGCCCATAAATCTTTACAAGAGAACAAAACTACTAGCGAAAACGCTGCGAACCAAATCAACACAAAACCATCAACCTCTGGAACCAATTCACACTGCCCATCGGAATTACTAAGTACAGTGACAAAGACTATAACTACGCATCAAAGTTGTATGGATCAGCATTGCAAAGCATGTCAAAGTTGCCATAATGtcgaaaaagttttgaaaatagagGACGTGCATTCTGCAGTAGACGATACTAATTCGGTACAGGAATCAGATGTTAACGAGTTTAGAGCCGAAAACGATGGTGAGAATTCTAATTCTAACGAACATTCTCAGAACTACACATCTAAACcatTGTACTACTCTCCGGACCAGTCAAATATTAAACTCGATAGGGATGCTACCGATAAATTACCTACACATTATAGTTTTAATGAAATTGATCGGTGGGCCCATAAATCTTTACAAGAGAACAAAACTACTAGCGAAAACGCTGCGAACCAAATCAACACAAAACCATCAACCTCTGGAACCAATTCACACTGCCCATCGGAATTACTAAGTACAGTGACAAAGACTATAACTACGCATCAAAGTTGTATGGATCAGCATTGCAAAGCATGTCAAAGTTGCCATAATGtcgaaaaagttttgaaaatagagGACGTGCATTCTGCAGTAGACGATACTAATTCGGTACAGGAATCAGATGTTAACGAGTTTAGAGCCGAAAACGATGGTGAGAATTCTAATTCTAACGAACATTCTCAGAACTACACATCTAAACATCCTATTGTGACAATGGGTGACAATGGCTGCGGACCGATTACTATGGAGGCGGATGTGAGCATTACGGTGTTAGAGTATGAGAAAATACGCGTTAATGAGCTCGATGCTAAACTGGAGGCGCTCATAGCTCGATCACCTGCTGCCATCACCTACACCTACGTCGGAAGACttctgacttgcgctcaatgtgctcgcccGTTTCGCGCAagaatcgcatTGTACTACTCTCCGGACCAGTCAAATATTGAACTCGATAGGGATGCTACCGATAAATTACCTACACATTATAGTTTTAATGAAATTGATCGGTGGGCCCATAAATCTTTACAAGAGAACAAAACTACTAGCGAAAACGCTGCGAACCAAATCAACACAAAACCATCAACCTCTGGAACCAATTCACACTGCCCATCGGAATTACTAAGTACAGTGACAAAGACTATAACTACGCATCAAAGTTGTATGGATCAGCATTGCAAAGCATGTCAAAGTTGCCATAATGtcgaaaaagttttgaaaatagagGACGTGCATTCTGCAGTAGACGATACTAATTCGGTACAGGAATCAGATGTTAACGAGTTTAGAGCCGAAAACGATGGTGAGAATTCTAATTCTAACGAACATTCTCAGAACTACACATCTAAACGTAAGGAACGCACAAATCAAACTTCCTTAGATCCAAATATTGATAAAggcgaaaaaatatatatcgaaTTGTCTAAAGAAAGTGCGACAGTTATTGAAGTTCGGGTCcagaaaaatcaaatcaaatcgctCGTAAATAATATCAAGATAGTTCCAAAAACACCGGACATGGAACTAACGGAGTTGGACATCaatcaaaatgaaaaaattttggATGCGGTACATAACTCTATAACAAATTTGCTGTCcgcaaaaaataaacaaaataaggaAACAACTAGCGCTATGCAAGAAAACCAACAAAGACCATGTTTCAATAACACACAACCAACGAGCTCCAAAACTTTTAAAACCACTCAAGTGGATGCGCCAGTATTCTATCCAAATGAGACTGAATTCAAGGATCCTATcgaatactttaataaaatcatGCCAGTTGCGGCAAAATTTGGAATGTGTAAAATTGTAGCACCACCGGAATTCAAACCAAAGTGTACTTTGAACGATGACGTAAGATTCGGTGTTACCAATCAATATATTTCTCGCTTGTATGCCCGTTGGGGTCCAGCTTCAAGAGAGATGAGCGCCATTAAAGCATATTTGGCATCTCAAAGCGTGGTTTTTACCAGACCACCATTGCTAGAGGGTATAGAAGTCAACCTACCAAGATTATATCATCTAGTGCAGCGCTTCGGTGGTCTAAAAAATGTCATAGAAAAAAAGCGTTGGAGCCGCATAGCTGACGAAATGCGTGATCCTATcgaatactttaataaaatcatGCCAGTTGCGGCAAAATTTGGAATGTGTAAAATTGTAGCACCACCGGAATTCAAACCAAAGTGTACTTTGAACGATGACGTAAGATTCGGTGTTACCAATCAATATATTTCTCGCTTGTATGCCCGTTGGGGTCCAGCTTCAAGAGAGATGAGCGCCATTAAAGCATATTTGGCATCTCAAAGCGTGGTTTTTACCAGACCACCATTGCTAGAGGGTATAGAAGTCAACCTACCAAGATTATATCATCTAGTGCAGCGCTTCGGTGGTCTAAAAAATGTCATAGAAAAAAAGCGTTGGAGCCGCATAGCTGACGAAATGCGTATTACGCAGACACCGAACACTGAACAAAAATTGGatcaaatatatgttaaatatattttgccgTATGATACATTATCCAGCAAAGAACGTCAGGATATTCTAAAAGCAGTTGAAgttcattggaataaaaaaaatctaagaaTGCTTGATAGGGCTATGAATCCGTTGCACAGACAGAAACGAGTACTGGGAGAATCAGAATCTTCCGAAGATGAAAATGACGAAGTACCGAACAATGTGTTAAACGCTCTTATCGAGGCCGAAGATTGTGTAGTTCCCGGACGCCAAATGAATTTGGCTACTTTTAAAAAGGTGTCAACCAAGGCTGTTGAAACATTTTTCAACACTACCACCCAGTTAAGCCCATCTGAAGTAGAGGTTGCCTACTGGAAATGTGACGATGGAATGTGCTGGCCGCAGCTCGTAGATCTAACAAGAGTTGAGGAAGAAAGGTTCGGGAGTAGATTCGCGACCGTTCAAAAGATGAATGAAGACAACGGAAGAGCGATGGCTGAAAGTGGCTCAGTACCGTTCGCTGTGTCAACCAAGGCTGTTGAAACATTTTTCAACACTACCACCCAGTTAAGCCCATCTGAAGTAGAGGTTGCCTACTGGAAGTGTGTTCTTCTGGGGACGGATCATGTGTGTGTAAATACTGCTTCGATAGATACCGGGGAAGAAGGTTATGGATTTACTACGTGTATATGCGACCCATACAAAAAACATCCATGGAACTTAAAGACGCTGAGCCAAAACGAAGGCAATATTCTACGTTCTTTGGGTCCTATTTTGGGAGCAACTGTCCCAACATTGCATTTGGGTATGGTTTATTCGACTAGCTGTTGGCATCGTGACCCGCATGGCCTGCCTTGGATTGAATACATGCATTCGGACCGGGCAAAATTTGATAGATGA
- Protein Sequence
- MAMVNEHWHAHKSDLHPHLQPVVVVERLKTTPVSNTIVMPKRKSDATGKDENIPVKKPMVTNKLNMQLRSQTRKLQGKIAKNQNFGDKKTNLQPNNPDFVLVDNRPSTCFTKKTASRKRKTTTGVKANGKSKPQLPPPPPSQPPTPPPPSQPPTPPPPPPEESAVSISSDDKPPEKKGKSSPVPALYYSPDQSNIELDRDATDKLPTHYSFNEIDRWAHKSLQENKTTSENAANQINTKPSTSGTNSHCPSELLSTVTKTITTHQSCMDQHCKACQSCHNVEKVLKIEDVHSAVDDTNSVQESDVNEFRAENDGENSNSNEHSQNYTSKPLYYSPDQSNIKLDRDATDKLPTHYSFNEIDRWAHKSLQENKTTSENAANQINTKPSTSGTNSHCPSELLSTVTKTITTHQSCMDQHCKACQSCHNVEKVLKIEDVHSAVDDTNSVQESDVNEFRAENDGENSNSNEHSQNYTSKHPIVTMGDNGCGPITMEADVSITVLEYEKIRVNELDAKLEALIARSPAAITYTYVGRLLTCAQCARPFRARIALYYSPDQSNIELDRDATDKLPTHYSFNEIDRWAHKSLQENKTTSENAANQINTKPSTSGTNSHCPSELLSTVTKTITTHQSCMDQHCKACQSCHNVEKVLKIEDVHSAVDDTNSVQESDVNEFRAENDGENSNSNEHSQNYTSKRKERTNQTSLDPNIDKGEKIYIELSKESATVIEVRVQKNQIKSLVNNIKIVPKTPDMELTELDINQNEKILDAVHNSITNLLSAKNKQNKETTSAMQENQQRPCFNNTQPTSSKTFKTTQVDAPVFYPNETEFKDPIEYFNKIMPVAAKFGMCKIVAPPEFKPKCTLNDDVRFGVTNQYISRLYARWGPASREMSAIKAYLASQSVVFTRPPLLEGIEVNLPRLYHLVQRFGGLKNVIEKKRWSRIADEMRDPIEYFNKIMPVAAKFGMCKIVAPPEFKPKCTLNDDVRFGVTNQYISRLYARWGPASREMSAIKAYLASQSVVFTRPPLLEGIEVNLPRLYHLVQRFGGLKNVIEKKRWSRIADEMRITQTPNTEQKLDQIYVKYILPYDTLSSKERQDILKAVEVHWNKKNLRMLDRAMNPLHRQKRVLGESESSEDENDEVPNNVLNALIEAEDCVVPGRQMNLATFKKVSTKAVETFFNTTTQLSPSEVEVAYWKCDDGMCWPQLVDLTRVEEERFGSRFATVQKMNEDNGRAMAESGSVPFAVSTKAVETFFNTTTQLSPSEVEVAYWKCVLLGTDHVCVNTASIDTGEEGYGFTTCICDPYKKHPWNLKTLSQNEGNILRSLGPILGATVPTLHLGMVYSTSCWHRDPHGLPWIEYMHSDRAKFDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -