Scos028415.1
Basic Information
- Insect
- Scrobipalpa costella
- Gene Symbol
- Pias3
- Assembly
- GCA_949820665.1
- Location
- OX463312.1:6348502-6359876[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.8e-23 2.1e-18 67.0 8.2 1 49 105 153 105 154 0.97
Sequence Information
- Coding Sequence
- ATGTGCCCATTAccaAATCCCATACCAACAAACAAACCCACACCAGAACCGAAGCGACCACCGCGGCCCGTCAACATCTCCTCCCTCGTCAAACTGTCCCCCACCGTCGCCAACACCATACACGTGACGTGGGCAGCTGACTTCTCACGGGCCTACGTGCTCAGCGTGTTCATGGTGCGCAAGCTGACGTCAGCTGAACTACTGCAGAGGCTCAAGAATAAGGGCACCAAGAATCCGGACTATACGAGATCTTTGATCAAAGAGAAGCTCTCTGAAGACTACGACAGCGAGATAGCCACCACCTCCCTGCGAGTGTCGCTCATGTGCCCCCTCGGCAAGATGCGCATGTCGTGCCCGTGCCGGCCGGCCGCCTGCCCGCATCTGCAGTGCTTCGACGCCTCGCTGTTCCTGCAAATGAATGAGAGGAAGCCCACCTGGTTGTGCCCCGTGTGCGACCGCCCCGCCTCCTATGACTCCCTGGTAGTTGACGGATACTTCCAAGAAGTGCTCACATCCTCGCGGCTGTCGTCTGAATGCAACGAGATCCAACTGCACGCGGACGGCTCGTGGTCGGCCCACAGCCCGCCCGCGCGCGCAGTCACCGCGCAGCCCGCGCAGGAACCAGTCACTCTCATCTCGGACGACCTAGAGGTGATACCAGTGGACAGCGGCAGCATTAGCGGCGGCAACAAGCGCGCCGCCGTCGGGGAGGCGCGCAAACCCACTGAGGTCCTGGTAGACCTCACGTCAGACTCGGAAGATGAACTGCCTTTGAAGAGGAAGATCCCGCAGCCGAAAGCCACGCCGCCCATCAGCGAGACTAACATCAAGAGCGATGAGAACTATTCCTCCAACGTAGACGCCGTGTCCTCCAGCGGGTACCGGTCGCCGGGCGGCGCGGGCAGCGCGGCGGTCATCTCGCTGGACAGCCCCTCGCCCCCCGCCGCGTCGCCGCCCCCGGCGCCCGCGCAGCGCGCCTCCCCCGCGCCCGAGTCCCGCGCCTCGCCCGCCACTTGCACGAGCAACAGCACGGAGCGCGAGGGCGGCGCGGAGGCGGCGCCTGCGCACTGGGCGCCCTACGCCGACACCGACGGCGACAACCACGACAACTACAGGAGAACCGCTTACAATCGCACCATGGAAAAACAACCTGACGAACCAGAGGATGTCATGAATGAGCCACCTTCGATAAGTGAACCCGTGGAGGTTCAAGATGCTGTAGCATCTACTTTTGCAACGCCATTCGCGCACCCAATATTCGCTGCTTCAAAATCGAAAGCACAAAAACAACGCGAGTACAGACAGCGTCTCGCAGCATCTAGAACTCCTGATCAGGCGGCCGCTGCGAGAATATCAAAGAACGAAAGACAACGCAACCACAGATCACGCCAAGCTGCTAACTTGGCTATTGCCAGTGGTTCTCCTGAAGCGAAAACTACATCTTCATCTCATTCAGGGGAAGAGTCCAGCAATGTCCAAACTCAAAAACAACACGCAAAACAACAATCTACCACCACTGCAGATCAACCTGATGAGCGAGTCAATCTCGCAAATGAGCTACTCTTTCCGGCAATTCCTGTTCCCATGGAGGCTCAAGAAGATCAAACGCCATTTGCAGAACCAATAACTGCTGCTCCAAAAACAAGGGCACAAATACAACGTGAGTACAGACAGCGGATTGCTGCATCCAAAACTCCTGCGCAGAGAGCAGCTGCAAGAGAAGCACGTAATGTAAGAGATCGAAACTACAGATCACGCCAAGCTGCTAACTTGAGCACGTAA
- Protein Sequence
- MCPLPNPIPTNKPTPEPKRPPRPVNISSLVKLSPTVANTIHVTWAADFSRAYVLSVFMVRKLTSAELLQRLKNKGTKNPDYTRSLIKEKLSEDYDSEIATTSLRVSLMCPLGKMRMSCPCRPAACPHLQCFDASLFLQMNERKPTWLCPVCDRPASYDSLVVDGYFQEVLTSSRLSSECNEIQLHADGSWSAHSPPARAVTAQPAQEPVTLISDDLEVIPVDSGSISGGNKRAAVGEARKPTEVLVDLTSDSEDELPLKRKIPQPKATPPISETNIKSDENYSSNVDAVSSSGYRSPGGAGSAAVISLDSPSPPAASPPPAPAQRASPAPESRASPATCTSNSTEREGGAEAAPAHWAPYADTDGDNHDNYRRTAYNRTMEKQPDEPEDVMNEPPSISEPVEVQDAVASTFATPFAHPIFAASKSKAQKQREYRQRLAASRTPDQAAAARISKNERQRNHRSRQAANLAIASGSPEAKTTSSSHSGEESSNVQTQKQHAKQQSTTTADQPDERVNLANELLFPAIPVPMEAQEDQTPFAEPITAAPKTRAQIQREYRQRIAASKTPAQRAAAREARNVRDRNYRSRQAANLST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -