Scos007650.1
Basic Information
- Insect
- Scrobipalpa costella
- Gene Symbol
- pnr
- Assembly
- GCA_949820665.1
- Location
- OX463297.1:25833261-25836995[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.6e-16 6.9e-13 49.2 3.3 1 35 449 482 449 483 0.97 2 4 1.1e-17 4.9e-14 52.9 7.5 1 35 510 543 510 544 0.97 3 4 3.4 1.5e+04 -3.1 3.8 10 26 624 635 620 642 0.58 4 4 10 4.4e+04 -5.2 7.3 9 23 636 649 631 651 0.79
Sequence Information
- Coding Sequence
- ATGGAGAACGTTCCATCGAACATGAGCGCGAGCTCGTCCCAGGAGGAGGTGAGCGACGCGAGTGGTGCGCTGCAGCTCGTGAAGAACGAGGTTCGCAGCGAGCAGCAACCGGGTGAACAGGACGAGCGGCACGAGCAGCACGAGCAGTCAGCCGGCGAGCAGCCGCCGCCCGAACACGCAGCCGAGCAGCCCGCCGAGCTGCCGCCGCAGTCCGTGATCCAGCGCCGAGCACTGCGCACCATCACTGCCGCCGGACACATCACCGAGGGCGACGAGCTGCCGGACGACGGCGTTAAAGATGAGCCACCTGAAGCTCCGCCGATGGATGAGCACCAGTACCAGCCCAAGCAAGAGGACGATGTGCAGCGCGCGCACCAGCAGTACGAGGAGGAGCGGATGCGGCTCGCAGACGCGGAGACGGCGCGCTACCTCGCGTTCAATCGCGGCGCGGTGCCCGGCGCAGCCCGCCCGCAGTTCGCGCGGCCGACGCGGGCACCCTACCCGCGCGGGCTGGCGCTGCGTTACGGCGCGCCGCACCACGTGATCGTGGCGCCGGACAGCGAGCAGGACGAGGGCGTGCACGAGGCTGCCGCCTTCCTCCAGCGCGAGAAGCAGGAGCTGCAGTATGTGACTAGCGGCGCGGGGGGTGCGGGCAGCGAGGAGGCGCGCTACTCCGCCGCGCTCGGCGAGCAGGCCGCCACAGCACTCGAGATGATCCAGTCCACCGCCCTCAGCAACCAGCAATCCGTCGGCATCGCGTACCAGCAAGTGAAATACGAGACGCGGGGTGAAGGCGAGGGTCGACCGGGCACGTACGCGAGCCTGCAGCCGGTGACGTCGGTGCATGGCGGGTACGCGTACTCGAGCGCGTCGCCGCAGTacggcgcggggggcgggggggCTCCCGGCTACGGCGCGTACGCTGCTAATGGCAAGGAGCTGCTGACGCTGTATGGCGGCGGGGCGCGGGAGGGGGAGTCCCCCCCGGGGCAGCTGCTGTACCGCTCCGACCCCACACTCTCCTCCTCCTCCCTCCCCGCACGGGGCCATGTCGTCTACAGCTCCGTGGTTCCACAGTCACAGACCGTTTATGAAGCTCCACCGAGCCCGAATTCACAACAAGTGACTTTATACACACACGGCAATGCAGTCCAGTACAAAGTAGGCGGCGAGCACTACCTCGGCGCCGGTGGAGGAGTCGACTACGTCCCAGTGTCAGGATACGAAGGTGGTCTGCTGGTCGAGGGATACGCGGCTCCCACGCAATCCTGGCCGGGGCACAACCTGCTACCTATCGACGATGGCTTCGATCCCAATATGGCAGGCATGGGAGAGGTGAAGGAATGCGTGAATTGCGCTGCTGCGACGACACCATTATGGCGACGGGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACACAAGAATCAACGGCGTCAACCGACCACCACTCAAGGGACAGAAGGCGAAACCACAGCAGGCACTGCCAACGAATGGTAACCGACGTGTCGGCGTGACGTGTGCCAACTGCCGCACCTCCAACACGACGCTCTGGAGGCGAAACAACAATGGTGAACCCGTCTGCAATGCCTGCGGACTCTACTACAAGCTGCATAATGTAAACCGACCCTTGAGTATGAAAAAGGACGGCATCCAGACGCGCAAACGGAAACCGAAAAGCATGGGCGGTGGCCACGGGCCGGGCTCCTCAAGACCCCCCGCGCCACTCACAGGTCGTCTATCTCCTCGGTCGAACATCAACAATGTGAAAGTTGAGGAGATAGACTGGAGCGGTAATTCACCGTCCTCTGTCGGTGCCGCGCTGGCACAGGTCGGTGGGGCGGATGGGAATGAGCGCTGCCCGCAGTGGAGGGCGGGCGGGGGCTGCCACCGCTGTACGCCGCGCTGGAGGctgcgccccccgcgcccctgcTGCTGCCGCGCCTCGAGCCGCGGCGCCCCCCGGAAGCCTGACGCACGCCCCCACCGCTCACACCGCCCACGCCTGCTAGCTGCTGGAGCCATCGTCGCAGAGCCGACATCCGCGAACAAGCAGAGGTTCTCCCGCCAGATTATCTTCTGCACTATCTCTCGAGCTGCTGCACGAATTCTTCTGAGATTTCAGCTTGCTACTCTTAACACGCTTCTTTTTCAATATCTAGAGTTATCAAACTTTGTAACTAACGTAGCTTCAGGTGATGGCTACTTCTTTTGCAAGCCTAGAGCCTTCGAATTAAGAGTGTATTCTACACTTCTACAGTGGGCAATAAACAGTCTATGTTGA
- Protein Sequence
- MENVPSNMSASSSQEEVSDASGALQLVKNEVRSEQQPGEQDERHEQHEQSAGEQPPPEHAAEQPAELPPQSVIQRRALRTITAAGHITEGDELPDDGVKDEPPEAPPMDEHQYQPKQEDDVQRAHQQYEEERMRLADAETARYLAFNRGAVPGAARPQFARPTRAPYPRGLALRYGAPHHVIVAPDSEQDEGVHEAAAFLQREKQELQYVTSGAGGAGSEEARYSAALGEQAATALEMIQSTALSNQQSVGIAYQQVKYETRGEGEGRPGTYASLQPVTSVHGGYAYSSASPQYGAGGGGAPGYGAYAANGKELLTLYGGGAREGESPPGQLLYRSDPTLSSSSLPARGHVVYSSVVPQSQTVYEAPPSPNSQQVTLYTHGNAVQYKVGGEHYLGAGGGVDYVPVSGYEGGLLVEGYAAPTQSWPGHNLLPIDDGFDPNMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHGPGSSRPPAPLTGRLSPRSNINNVKVEEIDWSGNSPSSVGAALAQVGGADGNERCPQWRAGGGCHRCTPRWRLRPPRPCCCRASSRGAPRKPDARPHRSHRPRLLAAGAIVAEPTSANKQRFSRQIIFCTISRAAARILLRFQLATLNTLLFQYLELSNFVTNVASGDGYFFCKPRAFELRVYSTLLQWAINSLC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -