Scos038769.1
Basic Information
- Insect
- Scrobipalpa costella
- Gene Symbol
- -
- Assembly
- GCA_949820665.1
- Location
- OX463324.1:569122-602526[-]
Transcription Factor Domain
- TF Family
- THAP
- Domain
- THAP domain
- PFAM
- PF05485
- TF Group
- Zinc-Coordinating Group
- Description
- The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 2.2e-13 1.5e-10 43.0 0.1 1 86 4 75 4 76 0.81 2 22 8.2e-05 0.054 15.5 0.0 48 86 88 120 77 121 0.76 3 22 8.2e-05 0.054 15.5 0.0 48 86 133 165 122 166 0.76 4 22 0.00036 0.24 13.4 0.0 51 86 170 199 167 200 0.84 5 22 8.2e-05 0.054 15.5 0.0 48 86 212 244 201 245 0.76 6 22 0.00036 0.24 13.4 0.0 51 86 249 278 246 279 0.84 7 22 8.2e-05 0.054 15.5 0.0 48 86 291 323 280 324 0.76 8 22 0.00036 0.24 13.4 0.0 51 86 328 357 325 358 0.84 9 22 8.2e-05 0.054 15.5 0.0 48 86 370 402 359 403 0.76 10 22 8.2e-05 0.054 15.5 0.0 48 86 415 447 404 448 0.76 11 22 0.00036 0.24 13.4 0.0 51 86 452 481 449 482 0.84 12 22 8.2e-05 0.054 15.5 0.0 48 86 494 526 483 527 0.76 13 22 8.2e-05 0.054 15.5 0.0 48 86 539 571 528 572 0.76 14 22 0.00036 0.24 13.4 0.0 51 86 576 605 573 606 0.84 15 22 0.00036 0.24 13.4 0.0 51 86 610 639 607 640 0.84 16 22 0.00036 0.24 13.4 0.0 51 86 644 673 641 674 0.84 17 22 8.2e-05 0.054 15.5 0.0 48 86 686 718 675 719 0.76 18 22 0.00036 0.24 13.4 0.0 51 86 723 752 720 753 0.84 19 22 0.00036 0.24 13.4 0.0 51 86 757 786 754 787 0.84 20 22 8.2e-05 0.054 15.5 0.0 48 86 799 831 788 832 0.76 21 22 8.2e-05 0.054 15.5 0.0 48 86 844 876 833 877 0.76 22 22 8.2e-05 0.054 15.5 0.0 48 86 889 921 878 922 0.76
Sequence Information
- Coding Sequence
- ATGGGAGTCTGCTGCGTGGATGGCTGCGAAGCTGATGAGAAAGAGGATGTTGTGTATTTCCCAGTGCCAGTAGCCCCCGCGCTGCGCCGCAAGTGGCGTGAAGCCATCAAACCGTCCGTGAAACTGCACCAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGACAGCGATCAAACCGTCCGTGAAACTGCACCAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGACAGCGATCAAACCGTCCGTGAAACTGCACCAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGACAGCGATCAAACCGTCCGTGAAACTGCACCAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGACAGCGATCAAACCGTCCGTGAAACTGCACCAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGACAGCGATCAAACCGTCCGTGAAACTGCACCAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGACAGCGATCAAACCGTCCGTGAAACTGCACCAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGACAGCGATCAAACCGTCCGTGAAACTGCACCAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGACAGCGATCAAACCGTCCGTGAAACTGCACCAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGACAGCGATCAAACCGTCCGTGAAACTGCACCAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGACAGCGATCAAACCGTCCGTGAAACTGCACCAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGACAGCGATCAAACCGTCCGTGAAACTGCACCAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGACAGCGATCAAACCGTCCGTGAAACTGCACCAGGACTCGAGGATATGCTCCAAGCATTTCAACAGCGCTGATTACGAGTGGGGCCGCGGCAAGCTGCGGCTGAGGGCGCGCGTCGTGCCCAGCGTGCTGCTCAAGagAGAATCCACGCCGCCTATACCTTCACCAGCGGAAACTAATGGAGCGCAAAATGGCGGCGTTCAAGATGGCGGAGAAAAGCAAGATGGCGGTGAAAAGCAAGATGGCGGCGAAAAGCAAGATGGCGGTGAAAAGCAAGATGGCGGAGATGAGACGGACGAGAATAATGCTGCTATGCAGGTGGAGCTAACGGTGCCTCAGTTCGGTTTGCTGACATCACCCTCACGGGAAAGCGAGCCAGATGACACTAACGAATGCACCATAGAGTGCGTCCCAGAGTTACTCCACGAAGAAAGCGACTCCCATTCCGAAACTGAACTACATAAAGAAGATATAGAGGACATCATAGCAAACTATCACATACAACAGCAcagcaaactgaacaactccgaTATAGGGAGGGAGACGGAAGATGCGGGGGAGAGAGGGACGGAGGATAGCACAGCAAGAGGGGACGCGAGCGAACCACATCGAGATACTAACAACAAGCAGCACGAGCCGCCGGCGAGAGAGAGGGGGAGAGCGAAGCAGAAACGAGACAGAGTATCTTCCCAAGGAGGCGACAGCGAGGAAGTTATAGAAATAGAATTCGACCCTACAGAGAGGAGGCCGGAATTCATTGAGATCTCAGTGGATGCTGATCGCGTCGGCCGAGCGGGCGCGCCGGGAACCGAACCCGCGACCGACGATTGCATGATCGTGCTGGAGAATGTGCAGGTGGACATCGACCCCGCCGAGCTGATGCTGGCCAGGCACCAGGACAGCGACGGCGAGAGCGATAGTCACAGGAAGGGCGACCCGATCAGCCTGCTCACCTCCAGCGACGAGGATGACGTCATCATCGAGGAACCGGACATTGACACTGTCGAGGTATCATCGGAGACGGATGAGGACGACCGGCCTCTCGTGACCTTGGTGAAGAGCAAGTCGAAGTCCAAGCCCACCAAGCTGACCAGGATACTGTGGGGCAACCTCACCGAGTACTACTGTTACCAGTGCAAATTCACAACACTATCAAAAGTGGAATCGGAGCGGCacaaactggaacattctacctCGAAAACGTTACACGTGTGCGAAGTTTGCAATTTCACTTGCGCGTCCAAATCCATGTTCTCTCGACACAAGAAGCGGCACAAAGAAGAGAAACGCTTCAAATGCAAACATTGCGAGTATAGAGCGAGGCACAACATGTCCCTAATGTATCATATGAAATCGCACGAAAACATCACTGTCGATACGATCGATGTCGATAATATAACTATAAGTGACGTTAAAGACAAATTCAAATGCAGCAATTGTAAATACGCGACGCGAAACCGGAAGGAAATTGAGAAACACACGAAGTCGTGTGCCAAAGGTCAATGGAAGAAGACCAAGGTCATACATTTGTGTGACCTTTGTACGTATTCGACCAATAGGAAGAGCGATTTGAGGAGACATCGCGAGAGGAGGCATGTGGAGGCGCGGGTGATGACTGTGAGGAttgaaactgaccaactttttGCAGGTTGA
- Protein Sequence
- MGVCCVDGCEADEKEDVVYFPVPVAPALRRKWREAIKPSVKLHQDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKTAIKPSVKLHQDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKTAIKPSVKLHQDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKTAIKPSVKLHQDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKTAIKPSVKLHQDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKTAIKPSVKLHQDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKTAIKPSVKLHQDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKTAIKPSVKLHQDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKTAIKPSVKLHQDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKTAIKPSVKLHQDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKTAIKPSVKLHQDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKTAIKPSVKLHQDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKTAIKPSVKLHQDSRICSKHFNSADYEWGRGKLRLRARVVPSVLLKRESTPPIPSPAETNGAQNGGVQDGGEKQDGGEKQDGGEKQDGGEKQDGGDETDENNAAMQVELTVPQFGLLTSPSRESEPDDTNECTIECVPELLHEESDSHSETELHKEDIEDIIANYHIQQHSKLNNSDIGRETEDAGERGTEDSTARGDASEPHRDTNNKQHEPPARERGRAKQKRDRVSSQGGDSEEVIEIEFDPTERRPEFIEISVDADRVGRAGAPGTEPATDDCMIVLENVQVDIDPAELMLARHQDSDGESDSHRKGDPISLLTSSDEDDVIIEEPDIDTVEVSSETDEDDRPLVTLVKSKSKSKPTKLTRILWGNLTEYYCYQCKFTTLSKVESERHKLEHSTSKTLHVCEVCNFTCASKSMFSRHKKRHKEEKRFKCKHCEYRARHNMSLMYHMKSHENITVDTIDVDNITISDVKDKFKCSNCKYATRNRKEIEKHTKSCAKGQWKKTKVIHLCDLCTYSTNRKSDLRRHRERRHVEARVMTVRIETDQLFAG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -