Scos038476.1
Basic Information
- Insect
- Scrobipalpa costella
- Gene Symbol
- Myrf
- Assembly
- GCA_949820665.1
- Location
- OX463323.1:4587648-4608258[+]
Transcription Factor Domain
- TF Family
- NDT80_PhoG
- Domain
- NDT80_PhoG domain
- PFAM
- PF05224
- TF Group
- Unclassified Structure
- Description
- This family includes the DNA-binding region of NDT80 [2] as well as PhoG and its homologues. The family contains Swiss:Q05534 or VIB-1. VIB-1 is thought to be a regulator of conidiation in Neurospora crassa and shares a region of similarity to PHOG, a possible phosphate nonrepressible acid phosphatase in Aspergillus nidulans. It has been found that vib-1 is not the structural gene for nonrepressible acid phosphatase, but rather may regulate nonrepressible acid phosphatase activity [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.1e-36 3.5e-31 110.1 1.8 2 180 267 412 266 412 0.94 2 4 0.016 6.9e+02 1.6 0.9 73 109 803 850 777 890 0.67 3 4 0.21 9.3e+03 -2.1 0.1 78 108 942 972 926 1024 0.72 4 4 0.19 8.1e+03 -1.9 0.7 37 106 1038 1107 1005 1131 0.60
Sequence Information
- Coding Sequence
- ATGATACGCTTCATCTGTTTAACGTCTGATAGTCCGGGTTTGATCGACGATTTGGAGGCGTACATCGCTCCCCCTGTCGGCGAGTACTATCATAGTCAGCCGATTGATGTACGCCGATTAGGGGGTCACCCACTCCCGGAAAGCCCACCAGATTCCGGCTCGGAGAACCCTTACAGTCCTGCAGAAACTACCCCTCACACCATCGCGGTCTCTCAACTTGGAGGCGACTATATGCTGGTCCATGACCACCTTCCAACCCACGAGATCCTCCAGCAGAATGGGGACTATATCTACGAGGAGTTGAAGTCAGATAACATTGACCATGAGGTGTTGAGGAACAATCTGAACGATGTGATGGTGATACAGCAAGACCACAATATTGTGGAGCTGGGGATTAGGAGACATGATTTGGTGGATCCTATGTATCAGAATAGGTATAACCAGCTCCCAGACCTGGAGCCAGGCATCATCAACCCTCAATTAGTATCCTTGAACCACGAGAGCCTGACTCCGGTCTACACGAGTCTTCAAGAACCTAGTAGCAAGAAGAGGAAGCACTCGCAGGATGTCTCGCAGGTCAAATGTGAACCAGAAAGCATCCCCCACTCGCGTCCCGCGCCCCCCTCGGTAGACGGATCAGAAGCCGGGGACGATGCTCCTCTGCAATGCATCAGGTTTCAGCAGTTCCAGCAGTCGTACTGGCTGCCACTGTATGATGGCAACTTGAAGCCActGCCAACAATCTCATACGTGGTGGGCGCGGACAAAGGCTTCAACTACTCTCAAATCGATGAGGCCTTCGTCTGCCAGAAGAAGAACCACTTCCAGGTCACCTGTCAGATACAGATGCAAGGGGACCCGCACTATGTGAAGACCCCGGATGGCTTTAAGAAGATTAACAACTTCTGTCTCCATTTCTATGGTGTTAAGGCAGAAGACCCAAGTCAAGAAGTAAAAGTAGAACAAAGTCAGTCAGATAGAACAAAGAAACCTTTTCATCCAGTACCTGTGGAAATCCGCCGCGAAGGTGCCAAGGTGACGGTAGGCCGGCTACATTTCGCGGAAACAACCAACAACAACATGAGGAAGAAAGGGCGTCCAAATCCTGATCAACGGCACTTTCAACTGGTGGTGGCCTTAAGGGCTCACACTACTAGTGGTGACTATATGATAGCGACACATGCCAGCGATAAGATCATTGTCAGGGCTTCAAACCCTGGCCAGTTCGAATCAGACTGTTCAGAGAACTGGTGGCAGCGAGGAGTTTCAGATAGCAGCGTGTTCTTCAACGGCAGAGTCGGCATCAACACGGACAGGCCGGATGAGTCCTGCGTCATTAATGGCAACCTGAAAGTGATGGGCCATATAGTGCAGCCATCAGACGCTCGCGCCAAGCACAACATTGAAGAGTTGGATACCGCACAACAGTTGAAGAATGTTCAGAGTATCAGGGTCGTGAAGTTCAACTACGACCCATCATTCGCGGAGCACTCTGGCCTATTAGGCTATGACCCGACGCGAGCCGCACACTCAGATACGGGTGTGATAGCGCAGGAAGTCCGCCGCGTGCTTCCCGAAGCCGTGAAGGAGGCTGGTGACGTCACGCTGCCCAATGGGAACACCATACACAAGTTCCTCGTTGTTAATAAGGACCGCATCTTCATGGAGAACCTGGGGGCAGTCAAGGAGCTGTGCAAGGTGACCGGCCACCTGGAGTCCAGGATCGACCAGCTCGAGAGAATCAACAAGAAACTCTGCAAGATGAGCATCCTTCAAAGAAGAGATAGCTCGCGGTCCAGCGCCAGTAACGATTCCCGATACTCAGCGATATCAGCAAAGTCCATACACAGCGACGGCAACATTTCCATCGAACAGATCCGCGACATCGCCAGAAACATTAGAAAGCACGAGTGTTGCCAGAAGTTGAGCCACCATTCGCCCAAATACACGAGAAAACAGTGCCGGAATTGCCATACACAATCTAAATACGGGAAATACTACAACACGAATAAAACTTCAGCGAAATGCGTTGCTAAAGAGAAAGGAGTATTCCCGACTTATACGGATACTTTAGAATCTAAACCGAAATCGGAAGATTATTCAGattctttgaaaaagaaagaaatagaTACCCCCCAAACAAACTTATGGCTAAGAGATGACTTTGGCTATGAGAGTTCTAGACTCGCGTTTTGCTGTAGAAAGAAAGATAGATATGGAGACGTCAGCAGCGAATTGATATCAAATAAGTTCCTGCAAATTGTTATTacaatattgatatttattatggCTGTGTGCCTGGTGGTGATGTCAGCGCTATACTTCAGAGAACACCAGGAGTTGCTCTCGATGAAGGAGATCAGGCTGCACGAGAAATTCACCAACTACCCTCATTACGGGAAGTTTAATACAGCACAACAGCATAGGCCGCCCGATCACAATCAGATACAGAATCTAAAACCAGCGCAACACTCAACTATAAAGAAAACTACAAAAGagAAAGGTCAACACAAGACTACTCAGGAATACACAACTACCTCCCCTACAGAAAACACGCACACAGCGGCCACTACCCTACATGCTTCCAGAAATTACGTCAAAAACGTACTACATATGGAGCAAACATCTTTACCGCCAAAATTAGACCGACCAATTTCCATTTCCAGAATTGCTGAGgTAATCGGGGGTGGCTGCAATTTCAACGTGAATACTGATAACGAGTTGGATGCTGAATGCcagTCATCGTGCGGTCTCGAACCTCCCCAAACCTACGAAAACCAAGAACCATTAGAGAGAAACCCTGAAAAGGAACTAAACGAAACCTTCTCCAGACCCTTAGAGCCCATTACACGAGACAAACTTCCTAGTATTCCTATTATGCCAGAAAAGAACAATGATACATTGAAGATTGAAAAGAAAGACGTAGAGACATACAAAATTGAAAAGAAAGACGCAgacacatacaaaatacatgatGAAATCATTGCAGAATCAAATCTACTTGATTCCACAAAACAGAACGGAACTGAAATACGACTCAAAAGAGATATCATAGCTAAGAAAGAGCACGAAGATCTGATAAAGCATCAAGATGTAGTCAAATCTATCAATTTGatacacaataaaacaaacttaGACCTAAAAACTGTAACAATTTCAACTTTGAATAGTGTTTCAGACAGAACCTATCAGAAAGACGATTTTATAGGTGTGACAAAGAAGAAAGAGACGAAGAAACCTATGAAAAGCGATGTAAGAGCGAAACGGGAGACCAATGAGGCGTTGTTGAGGAGCAGTTCAGAAGAAATGACGCTCAGCGAGCAATCTGATGAAATTCCTGGAGCAAAAGAATGTGACTCAGTAAGAGTAGGCATCAAGTCCATAACAAACTCATCTCTATTTGAAGAGCGGATCTGCACAAGAGCCGTACACAACTTCACGTACACTGTGCCGCTGTCTAGATGTGTGCAGCATAAACACATTGAGATCGTGTTTAGATCAACAAAACTGAAGGAACTCCGTCTCTGCGACCTCCGTTGCAAGTACGACTCTGTCAAGAGCTGTCAGCTGGTCCGTGAGACAGCCAAACCCATTCCCACTGGCGACGCGTGGACTTCCAAGATGACCCTGGAATGTAACATGGATAGAGTCATCAATATACGAGCACAGTTCAACACTATCAAAgaCCTGTGCTACCTGTCTCCAGAACACAATTCCTTCGTGGAATACAACATACACATCTACAGAGATTGCCATAactga
- Protein Sequence
- MIRFICLTSDSPGLIDDLEAYIAPPVGEYYHSQPIDVRRLGGHPLPESPPDSGSENPYSPAETTPHTIAVSQLGGDYMLVHDHLPTHEILQQNGDYIYEELKSDNIDHEVLRNNLNDVMVIQQDHNIVELGIRRHDLVDPMYQNRYNQLPDLEPGIINPQLVSLNHESLTPVYTSLQEPSSKKRKHSQDVSQVKCEPESIPHSRPAPPSVDGSEAGDDAPLQCIRFQQFQQSYWLPLYDGNLKPLPTISYVVGADKGFNYSQIDEAFVCQKKNHFQVTCQIQMQGDPHYVKTPDGFKKINNFCLHFYGVKAEDPSQEVKVEQSQSDRTKKPFHPVPVEIRREGAKVTVGRLHFAETTNNNMRKKGRPNPDQRHFQLVVALRAHTTSGDYMIATHASDKIIVRASNPGQFESDCSENWWQRGVSDSSVFFNGRVGINTDRPDESCVINGNLKVMGHIVQPSDARAKHNIEELDTAQQLKNVQSIRVVKFNYDPSFAEHSGLLGYDPTRAAHSDTGVIAQEVRRVLPEAVKEAGDVTLPNGNTIHKFLVVNKDRIFMENLGAVKELCKVTGHLESRIDQLERINKKLCKMSILQRRDSSRSSASNDSRYSAISAKSIHSDGNISIEQIRDIARNIRKHECCQKLSHHSPKYTRKQCRNCHTQSKYGKYYNTNKTSAKCVAKEKGVFPTYTDTLESKPKSEDYSDSLKKKEIDTPQTNLWLRDDFGYESSRLAFCCRKKDRYGDVSSELISNKFLQIVITILIFIMAVCLVVMSALYFREHQELLSMKEIRLHEKFTNYPHYGKFNTAQQHRPPDHNQIQNLKPAQHSTIKKTTKEKGQHKTTQEYTTTSPTENTHTAATTLHASRNYVKNVLHMEQTSLPPKLDRPISISRIAEVIGGGCNFNVNTDNELDAECQSSCGLEPPQTYENQEPLERNPEKELNETFSRPLEPITRDKLPSIPIMPEKNNDTLKIEKKDVETYKIEKKDADTYKIHDEIIAESNLLDSTKQNGTEIRLKRDIIAKKEHEDLIKHQDVVKSINLIHNKTNLDLKTVTISTLNSVSDRTYQKDDFIGVTKKKETKKPMKSDVRAKRETNEALLRSSSEEMTLSEQSDEIPGAKECDSVRVGIKSITNSSLFEERICTRAVHNFTYTVPLSRCVQHKHIEIVFRSTKLKELRLCDLRCKYDSVKSCQLVRETAKPIPTGDAWTSKMTLECNMDRVINIRAQFNTIKDLCYLSPEHNSFVEYNIHIYRDCHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00275299;
- 90% Identity
- iTF_01501150;
- 80% Identity
- -